RNA–Protein interactions for RNA: ENST00000554785.1

PRPF39-208, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 2

Gene PRPF39, Length 2,121 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-208ENST00000554785 FSHBP01225 129 aa2.15□□□□□ -2.06
PRPF39-208ENST00000554785 ZNF888P0CJ79 500 aaPredicted RBP2.15□□□□□ -2.06
PRPF39-208ENST00000554785 SRGAP2CP0DJJ0 459 aa2.15□□□□□ -2.06
PRPF39-208ENST00000554785 PYGMP11217 842 aa2.15□□□□□ -2.06
PRPF39-208ENST00000554785 PDE6AP16499 860 aa2.15□□□□□ -2.06
PRPF39-208ENST00000554785 NAT1P18440 290 aa2.15□□□□□ -2.06
PRPF39-208ENST00000554785 SDSP20132 328 aa2.15□□□□□ -2.06
PRPF39-208ENST00000554785 JAM2P57087 298 aa2.15□□□□□ -2.06
PRPF39-208ENST00000554785 GUCY1A3Q02108 690 aa2.15□□□□□ -2.06
PRPF39-208ENST00000554785 SPIRE1Q08AE8 756 aa2.15□□□□□ -2.06
PRPF39-208ENST00000554785 VASNQ6EMK4 673 aa2.15□□□□□ -2.06
PRPF39-208ENST00000554785 CYP4F22Q6NT55 531 aa2.15□□□□□ -2.06
PRPF39-208ENST00000554785 BORAQ6PGQ7 559 aa2.15□□□□□ -2.06
PRPF39-208ENST00000554785 ARHGAP36Q6ZRI8 547 aa2.15□□□□□ -2.06
PRPF39-208ENST00000554785 SPRED1Q7Z699 444 aa2.15□□□□□ -2.06
PRPF39-208ENST00000554785 FILIP1Q7Z7B0 1213 aa2.15□□□□□ -2.06
PRPF39-208ENST00000554785 TRIM48Q8IWZ4 208 aa2.15□□□□□ -2.06
PRPF39-208ENST00000554785 PUM2Q8TB72 1066 aaKnown RBP eCLIP2.15□□□□□ -2.06
PRPF39-208ENST00000554785 SCLYQ96I15 445 aa2.15□□□□□ -2.06
PRPF39-208ENST00000554785 TACO1Q9BSH4 297 aaKnown RBP2.15□□□□□ -2.06
PRPF39-208ENST00000554785 MRIQ9BWK5 157 aa2.15□□□□□ -2.06
PRPF39-208ENST00000554785 MEGF9Q9H1U4 602 aa2.15□□□□□ -2.06
PRPF39-208ENST00000554785 SPC25Q9HBM1 224 aa2.15□□□□□ -2.06
PRPF39-208ENST00000554785 TRIM39Q9HCM9 518 aa2.15□□□□□ -2.06
PRPF39-208ENST00000554785 DLL4Q9NR61 685 aa2.15□□□□□ -2.06
PRPF39-208ENST00000554785 INTS7Q9NVH2 962 aaKnown RBP2.15□□□□□ -2.06
PRPF39-208ENST00000554785 IFT57Q9NWB7 429 aa2.15□□□□□ -2.06
PRPF39-208ENST00000554785 MAGEC2Q9UBF1 373 aaPredicted RBP2.15□□□□□ -2.06
PRPF39-208ENST00000554785 FGD5Q6ZNL6 1462 aa2.15□□□□□ -2.06
PRPF39-208ENST00000554785 TOP2AP11388 1531 aaKnown RBP2.15□□□□□ -2.06
PRPF39-208ENST00000554785 KIF21BO75037 1637 aa2.15□□□□□ -2.07
PRPF39-208ENST00000554785 TCRBV16S1A1N1A0A5B0 115 aa2.15□□□□□ -2.07
PRPF39-208ENST00000554785 ZNF839A8K0R7 811 aa2.15□□□□□ -2.07
PRPF39-208ENST00000554785 FAM47E-STBD1D6RA91 191 aa2.15□□□□□ -2.07
PRPF39-208ENST00000554785 MAN2B1O00754 1011 aa2.15□□□□□ -2.07
PRPF39-208ENST00000554785 WNT9AO14904 365 aa2.15□□□□□ -2.07
PRPF39-208ENST00000554785 DNAJC8O75937 253 aaPredicted RBP2.15□□□□□ -2.07
PRPF39-208ENST00000554785 CNOT4O95628 575 aaKnown RBP2.15□□□□□ -2.07
PRPF39-208ENST00000554785 CRTAMO95727 393 aa2.15□□□□□ -2.07
PRPF39-208ENST00000554785 MYCLP1P12525 358 aaPredicted RBP2.15□□□□□ -2.07
PRPF39-208ENST00000554785 PTPN1P18031 435 aaKnown RBP2.15□□□□□ -2.07
PRPF39-208ENST00000554785 PPP2CBP62714 309 aa2.15□□□□□ -2.07
PRPF39-208ENST00000554785 PPP2CAP67775 309 aa2.15□□□□□ -2.07
PRPF39-208ENST00000554785 NOLC1Q14978 699 aaKnown RBP eCLIP2.15□□□□□ -2.075e-32■■■■■ 47.5
PRPF39-208ENST00000554785 SMAD2Q15796 467 aaKnown RBP2.15□□□□□ -2.07
PRPF39-208ENST00000554785 GLB1LQ6UWU2 654 aa2.15□□□□□ -2.07
PRPF39-208ENST00000554785 FGD2Q7Z6J4 655 aa2.15□□□□□ -2.07
PRPF39-208ENST00000554785 MTDHQ86UE4 582 aaKnown RBP2.15□□□□□ -2.07
PRPF39-208ENST00000554785 PTRH1Q86Y79 214 aaKnown RBP2.15□□□□□ -2.07
PRPF39-208ENST00000554785 KLHL36Q8N4N3 616 aa2.15□□□□□ -2.07
PRPF39-208ENST00000554785 CHST13Q8NET6 341 aa2.15□□□□□ -2.07
PRPF39-208ENST00000554785 DNERQ8NFT8 737 aa2.15□□□□□ -2.07
PRPF39-208ENST00000554785 GNRHR2Q96P88 292 aa2.15□□□□□ -2.07
PRPF39-208ENST00000554785 SEMA4AQ9H3S1 761 aa2.15□□□□□ -2.07
PRPF39-208ENST00000554785 SMURF1Q9HCE7 757 aa2.15□□□□□ -2.07
PRPF39-208ENST00000554785 ARHGAP20Q9P2F6 1191 aa2.15□□□□□ -2.07
PRPF39-208ENST00000554785 FTSJ1Q9UET6 329 aa2.15□□□□□ -2.07
PRPF39-208ENST00000554785 ADAM29Q9UKF5 820 aa2.15□□□□□ -2.07
PRPF39-208ENST00000554785 TNPO3Q9Y5L0 923 aaKnown RBP2.15□□□□□ -2.07
PRPF39-208ENST00000554785 A0A087X0B3 334 aa2.14□□□□□ -2.07
PRPF39-208ENST00000554785 WDR97A6NE52 1622 aa2.14□□□□□ -2.07
PRPF39-208ENST00000554785 B4E1Z4 1266 aa2.14□□□□□ -2.07
PRPF39-208ENST00000554785 ARVCFO00192 962 aa2.14□□□□□ -2.07
PRPF39-208ENST00000554785 OPA1O60313 960 aa2.14□□□□□ -2.07
PRPF39-208ENST00000554785 SOGA1O94964 1423 aa2.14□□□□□ -2.07
PRPF39-208ENST00000554785 RASGRP1O95267 797 aa2.14□□□□□ -2.07
PRPF39-208ENST00000554785 ASLP04424 464 aa2.14□□□□□ -2.07
PRPF39-208ENST00000554785 KRT15P19012 456 aa2.14□□□□□ -2.07
PRPF39-208ENST00000554785 IGFALSP35858 605 aa2.14□□□□□ -2.07
PRPF39-208ENST00000554785 FLT3P36888 993 aa2.14□□□□□ -2.07
PRPF39-208ENST00000554785 ACVRL1P37023 503 aa2.14□□□□□ -2.07
PRPF39-208ENST00000554785 EPHB4P54760 987 aa2.14□□□□□ -2.07
PRPF39-208ENST00000554785 DBPQ10586 325 aaPredicted RBP2.14□□□□□ -2.07
PRPF39-208ENST00000554785 PAK1Q13153 545 aa2.14□□□□□ -2.07
PRPF39-208ENST00000554785 BTBD8Q5XKL5 378 aa2.14□□□□□ -2.07
PRPF39-208ENST00000554785 ZNF585AQ6P3V2 769 aa2.14□□□□□ -2.07
PRPF39-208ENST00000554785 CNNM4Q6P4Q7 775 aa2.14□□□□□ -2.07
PRPF39-208ENST00000554785 Q6ZUG5 572 aa2.14□□□□□ -2.07
PRPF39-208ENST00000554785 LRRTM3Q86VH5 581 aa2.14□□□□□ -2.07
PRPF39-208ENST00000554785 AHI1Q8N157 1196 aa2.14□□□□□ -2.07
PRPF39-208ENST00000554785 ADCY10Q96PN6 1610 aa2.14□□□□□ -2.07
PRPF39-208ENST00000554785 ALG1Q9BT22 464 aa2.14□□□□□ -2.07
PRPF39-208ENST00000554785 KATNBL1Q9H079 304 aa2.14□□□□□ -2.07
PRPF39-208ENST00000554785 SRPK3Q9UPE1 567 aa2.14□□□□□ -2.07
PRPF39-208ENST00000554785 CCDC88BA6NC98 1476 aa2.14□□□□□ -2.07
PRPF39-208ENST00000554785 MAGI1Q96QZ7 1491 aaPredicted RBP2.14□□□□□ -2.07
PRPF39-208ENST00000554785 NPEPPSL1A6NEC2 478 aa2.14□□□□□ -2.07
PRPF39-208ENST00000554785 PATE3B3GLJ2 98 aa2.14□□□□□ -2.07
PRPF39-208ENST00000554785 ZNF561-AS1K7EIQ3 104 aa2.14□□□□□ -2.07
PRPF39-208ENST00000554785 FOXS1O43638 330 aa2.14□□□□□ -2.07
PRPF39-208ENST00000554785 PDE8AO60658 829 aa2.14□□□□□ -2.07
PRPF39-208ENST00000554785 FBXO21O94952 628 aa2.14□□□□□ -2.07
PRPF39-208ENST00000554785 ONECUT2O95948 504 aa2.14□□□□□ -2.07
PRPF39-208ENST00000554785 ENO2P09104 434 aaPredicted RBP2.14□□□□□ -2.07
PRPF39-208ENST00000554785 VIL1P09327 827 aaKnown RBP2.14□□□□□ -2.07
PRPF39-208ENST00000554785 C6P13671 934 aa2.14□□□□□ -2.07
PRPF39-208ENST00000554785 MC4RP32245 332 aa2.14□□□□□ -2.07
PRPF39-208ENST00000554785 CSF2RBP32927 897 aa2.14□□□□□ -2.07
PRPF39-208ENST00000554785 HSPA2P54652 639 aa2.14□□□□□ -2.07
PRPF39-208ENST00000554785 R3HDM1Q15032 1099 aaKnown RBP2.14□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 76.2 ms