RNA–Protein interactions for RNA: ENST00000554350.5

ATXN3-226, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 943 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-226ENST00000554350 KIAA0355O15063 1070 aa7.09□□□□□ -1.27
ATXN3-226ENST00000554350 DCXO43602 365 aa7.09□□□□□ -1.27
ATXN3-226ENST00000554350 MAPK4P31152 587 aa7.09□□□□□ -1.27
ATXN3-226ENST00000554350 GYG1P46976 350 aa7.09□□□□□ -1.27
ATXN3-226ENST00000554350 ATP2B2Q01814 1243 aa7.09□□□□□ -1.27
ATXN3-226ENST00000554350 PPIGQ13427 754 aaKnown RBP eCLIP7.09□□□□□ -1.27
ATXN3-226ENST00000554350 SNX17Q15036 470 aa7.09□□□□□ -1.27
ATXN3-226ENST00000554350 FKBP1CQ5VVH2 108 aa7.09□□□□□ -1.27
ATXN3-226ENST00000554350 KRT40Q6A162 431 aa7.09□□□□□ -1.27
ATXN3-226ENST00000554350 SV2BQ7L1I2 683 aa7.09□□□□□ -1.27
ATXN3-226ENST00000554350 VPS37DQ86XT2 251 aa7.09□□□□□ -1.27
ATXN3-226ENST00000554350 SLC44A5Q8NCS7 719 aa7.09□□□□□ -1.27
ATXN3-226ENST00000554350 GPRC5AQ8NFJ5 357 aa7.09□□□□□ -1.27
ATXN3-226ENST00000554350 ZDHHC15Q96MV8 337 aa7.09□□□□□ -1.27
ATXN3-226ENST00000554350 CARS2Q9HA77 564 aaKnown RBP7.09□□□□□ -1.27
ATXN3-226ENST00000554350 YBX2Q9Y2T7 364 aaKnown RBP7.09□□□□□ -1.27
ATXN3-226ENST00000554350 ST14Q9Y5Y6 855 aa7.09□□□□□ -1.27
ATXN3-226ENST00000554350 CAPN6Q9Y6Q1 641 aa7.09□□□□□ -1.27
ATXN3-226ENST00000554350 MYH3P11055 1940 aa7.09□□□□□ -1.27
ATXN3-226ENST00000554350 PKD1L2Q7Z442 2459 aa7.08□□□□□ -1.28
ATXN3-226ENST00000554350 UTYO14607 1347 aa7.08□□□□□ -1.28
ATXN3-226ENST00000554350 ANKRD18BA2A2Z9 1011 aa7.08□□□□□ -1.28
ATXN3-226ENST00000554350 ACRP10323 421 aa7.08□□□□□ -1.28
ATXN3-226ENST00000554350 HIBADHP31937 336 aaKnown RBP7.08□□□□□ -1.28
ATXN3-226ENST00000554350 CYP2C19P33261 490 aa7.08□□□□□ -1.28
ATXN3-226ENST00000554350 ID4P47928 161 aa7.08□□□□□ -1.28
ATXN3-226ENST00000554350 RABGGTBP53611 331 aa7.08□□□□□ -1.28
ATXN3-226ENST00000554350 HMGCS2P54868 508 aa7.08□□□□□ -1.28
ATXN3-226ENST00000554350 KCNMB1Q16558 191 aa7.08□□□□□ -1.28
ATXN3-226ENST00000554350 TMEM240Q5SV17 173 aa7.08□□□□□ -1.28
ATXN3-226ENST00000554350 UBE3BQ7Z3V4 1068 aa7.08□□□□□ -1.28
ATXN3-226ENST00000554350 GPR142Q7Z601 462 aa7.08□□□□□ -1.28
ATXN3-226ENST00000554350 PLEKHH3Q7Z736 793 aa7.08□□□□□ -1.28
ATXN3-226ENST00000554350 PRSS33Q8NF86 280 aa7.08□□□□□ -1.28
ATXN3-226ENST00000554350 TDRD7Q8NHU6 1098 aaKnown RBP7.08□□□□□ -1.28
ATXN3-226ENST00000554350 LIN37Q96GY3 246 aaPredicted RBP7.08□□□□□ -1.28
ATXN3-226ENST00000554350 MIPEPQ99797 713 aa7.08□□□□□ -1.28
ATXN3-226ENST00000554350 PAGR1Q9BTK6 254 aa7.08□□□□□ -1.28
ATXN3-226ENST00000554350 KRTAP4-9Q9BYQ8 210 aa7.08□□□□□ -1.28
ATXN3-226ENST00000554350 MTIF3Q9H2K0 278 aaKnown RBP7.08□□□□□ -1.28
ATXN3-226ENST00000554350 PHAXQ9H814 394 aaKnown RBP7.08□□□□□ -1.28
ATXN3-226ENST00000554350 CERS4Q9HA82 394 aa7.08□□□□□ -1.28
ATXN3-226ENST00000554350 XPO5Q9HAV4 1204 aaKnown RBP eCLIP7.08□□□□□ -1.28
ATXN3-226ENST00000554350 MORF4L1Q9UBU8 362 aa7.08□□□□□ -1.28
ATXN3-226ENST00000554350 MTCH2Q9Y6C9 303 aa7.08□□□□□ -1.28
ATXN3-226ENST00000554350 BAHCC1Q9P281 2608 aa7.08□□□□□ -1.28
ATXN3-226ENST00000554350 PTPRFP10586 1907 aa7.07□□□□□ -1.28
ATXN3-226ENST00000554350 CFAP54Q96N23 3096 aa7.07□□□□□ -1.28
ATXN3-226ENST00000554350 MAST3O60307 1309 aa7.07□□□□□ -1.28
ATXN3-226ENST00000554350 LRRC10BA6NIK2 292 aa7.07□□□□□ -1.28
ATXN3-226ENST00000554350 GFRA2O00451 464 aa7.07□□□□□ -1.28
ATXN3-226ENST00000554350 MYOGP15173 224 aa7.07□□□□□ -1.28
ATXN3-226ENST00000554350 FGD1P98174 961 aa7.07□□□□□ -1.28
ATXN3-226ENST00000554350 HDLBPQ00341 1268 aaKnown RBP7.07□□□□□ -1.28
ATXN3-226ENST00000554350 SPP2Q13103 211 aa7.07□□□□□ -1.28
ATXN3-226ENST00000554350 WIPI1Q5MNZ9 446 aaPredicted RBP7.07□□□□□ -1.28
ATXN3-226ENST00000554350 SFRP5Q5T4F7 317 aa7.07□□□□□ -1.28
ATXN3-226ENST00000554350 APOBEC3HQ6NTF7 200 aaKnown RBP7.07□□□□□ -1.28
ATXN3-226ENST00000554350 PSRC1Q6PGN9 363 aaPredicted RBP7.07□□□□□ -1.28
ATXN3-226ENST00000554350 ZNF365Q70YC5 407 aa7.07□□□□□ -1.28
ATXN3-226ENST00000554350 HDXQ7Z353 690 aa7.07□□□□□ -1.28
ATXN3-226ENST00000554350 KSR1Q8IVT5 923 aa7.07□□□□□ -1.28
ATXN3-226ENST00000554350 MFSD4AQ8N468 514 aa7.07□□□□□ -1.28
ATXN3-226ENST00000554350 EDC3Q96F86 508 aaKnown RBP7.07□□□□□ -1.28
ATXN3-226ENST00000554350 FAM84AQ96KN4 292 aa7.07□□□□□ -1.28
ATXN3-226ENST00000554350 RNF19AQ9NV58 838 aa7.07□□□□□ -1.28
ATXN3-226ENST00000554350 FLRT1Q9NZU1 646 aa7.07□□□□□ -1.28
ATXN3-226ENST00000554350 ZFHX2Q9C0A1 2572 aaPredicted RBP7.07□□□□□ -1.28
ATXN3-226ENST00000554350 GLRX3O76003 335 aaKnown RBP7.06□□□□□ -1.28
ATXN3-226ENST00000554350 DDX58O95786 925 aaKnown RBP7.06□□□□□ -1.28
ATXN3-226ENST00000554350 TIMP1P01033 207 aa7.06□□□□□ -1.28
ATXN3-226ENST00000554350 CSF2RAP15509 400 aa7.06□□□□□ -1.28
ATXN3-226ENST00000554350 LRRC41Q15345 812 aa7.06□□□□□ -1.28
ATXN3-226ENST00000554350 MLANAQ16655 118 aa7.06□□□□□ -1.28
ATXN3-226ENST00000554350 TAF7LQ5H9L4 462 aa7.06□□□□□ -1.28
ATXN3-226ENST00000554350 CDKAL1Q5VV42 579 aa7.06□□□□□ -1.28
ATXN3-226ENST00000554350 TTBK2Q6IQ55 1244 aa7.06□□□□□ -1.28
ATXN3-226ENST00000554350 LETMD1Q6P1Q0 360 aa7.06□□□□□ -1.28
ATXN3-226ENST00000554350 FAM178BQ8IXR5 827 aa7.06□□□□□ -1.28
ATXN3-226ENST00000554350 TMEM199Q8N511 208 aa7.06□□□□□ -1.28
ATXN3-226ENST00000554350 MFSD2AQ8NA29 543 aa7.06□□□□□ -1.28
ATXN3-226ENST00000554350 TRPV1Q8NER1 839 aa7.06□□□□□ -1.28
ATXN3-226ENST00000554350 BHLHE22Q8NFJ8 381 aaPredicted RBP7.06□□□□□ -1.28
ATXN3-226ENST00000554350 TBC1D22AQ8WUA7 517 aa7.06□□□□□ -1.28
ATXN3-226ENST00000554350 USP6NLQ92738 828 aa7.06□□□□□ -1.28
ATXN3-226ENST00000554350 ATOH1Q92858 354 aaPredicted RBP7.06□□□□□ -1.28
ATXN3-226ENST00000554350 PORCNQ9H237 461 aa7.06□□□□□ -1.28
ATXN3-226ENST00000554350 TXNRD2Q9NNW7 524 aa7.06□□□□□ -1.28
ATXN3-226ENST00000554350 BABAM1Q9NWV8 329 aa7.06□□□□□ -1.28
ATXN3-226ENST00000554350 PCDHB5Q9Y5E4 795 aa7.06□□□□□ -1.28
ATXN3-226ENST00000554350 A0A0G2JMZ2 1700 aa7.06□□□□□ -1.28
ATXN3-226ENST00000554350 ZNF318Q5VUA4 2279 aa7.06□□□□□ -1.28
ATXN3-226ENST00000554350 XIRP2A4UGR9 3374 aa7.05□□□□□ -1.28
ATXN3-226ENST00000554350 WDFY4Q6ZS81 3184 aa7.05□□□□□ -1.28
ATXN3-226ENST00000554350 GBF1Q92538 1859 aa7.05□□□□□ -1.28
ATXN3-226ENST00000554350 H3BS24 57 aa7.05□□□□□ -1.28
ATXN3-226ENST00000554350 CTNND1O60716 968 aaKnown RBP7.05□□□□□ -1.28
ATXN3-226ENST00000554350 CST3P01034 146 aaPredicted RBP7.05□□□□□ -1.28
ATXN3-226ENST00000554350 LDHBP07195 334 aaKnown RBP7.05□□□□□ -1.28
ATXN3-226ENST00000554350 RIPK4P57078 832 aa7.05□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms