RNA–Protein interactions for RNA: ENST00000554079.1

SIX4-202, Transcript of SIX homeobox 4, humanhuman

TSL 1 (best)

Gene SIX4, Length 2,003 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIX4-202ENST00000554079 POTEJP0CG39 1038 aa10.33□□□□□ -0.76
SIX4-202ENST00000554079 HOXA10P31260 410 aaPredicted RBP10.33□□□□□ -0.76
SIX4-202ENST00000554079 IFI35P80217 286 aaPredicted RBP10.33□□□□□ -0.76
SIX4-202ENST00000554079 NEXNQ0ZGT2 675 aa10.33□□□□□ -0.76
SIX4-202ENST00000554079 ACVR2BQ13705 512 aa10.33□□□□□ -0.76
SIX4-202ENST00000554079 TNFAIP8L3Q5GJ75 292 aa10.33□□□□□ -0.76
SIX4-202ENST00000554079 MEI1Q5TIA1 1274 aa10.33□□□□□ -0.76
SIX4-202ENST00000554079 THOC7Q6I9Y2 204 aaKnown RBP10.33□□□□□ -0.76
SIX4-202ENST00000554079 C3orf62Q6ZUJ4 267 aa10.33□□□□□ -0.76
SIX4-202ENST00000554079 PROSER2Q86WR7 435 aaPredicted RBP10.33□□□□□ -0.76
SIX4-202ENST00000554079 COL23A1Q86Y22 540 aaPredicted RBP10.33□□□□□ -0.76
SIX4-202ENST00000554079 ECHDC2Q86YB7 292 aa10.33□□□□□ -0.76
SIX4-202ENST00000554079 THEMISQ8N1K5 641 aaPredicted RBP10.33□□□□□ -0.76
SIX4-202ENST00000554079 STAG2Q8N3U4 1231 aa10.33□□□□□ -0.76
SIX4-202ENST00000554079 KBTBD3Q8NAB2 608 aa10.33□□□□□ -0.76
SIX4-202ENST00000554079 DDX50Q9BQ39 737 aaKnown RBP10.33□□□□□ -0.76
SIX4-202ENST00000554079 AZI2Q9H6S1 392 aa10.33□□□□□ -0.76
SIX4-202ENST00000554079 HESX1Q9UBX0 185 aa10.33□□□□□ -0.76
SIX4-202ENST00000554079 PCDHB6Q9Y5E3 794 aa10.33□□□□□ -0.76
SIX4-202ENST00000554079 A2ML1A8K2U0 1454 aa10.33□□□□□ -0.76
SIX4-202ENST00000554079 SLIT1O75093 1534 aa10.33□□□□□ -0.76
SIX4-202ENST00000554079 TCP11X1B4DZS4 312 aa10.33□□□□□ -0.76
SIX4-202ENST00000554079 CES2O00748 559 aa10.33□□□□□ -0.76
SIX4-202ENST00000554079 MAGEB3O15480 346 aa10.33□□□□□ -0.76
SIX4-202ENST00000554079 BUB1O43683 1085 aa10.33□□□□□ -0.76
SIX4-202ENST00000554079 AGTP01019 485 aa10.33□□□□□ -0.76
SIX4-202ENST00000554079 PORP16435 677 aaPredicted RBP10.33□□□□□ -0.76
SIX4-202ENST00000554079 TRIM21P19474 475 aaKnown RBP10.33□□□□□ -0.76
SIX4-202ENST00000554079 SERPINB3P29508 390 aa10.33□□□□□ -0.76
SIX4-202ENST00000554079 EIF4A3P38919 411 aaKnown RBP10.33□□□□□ -0.76
SIX4-202ENST00000554079 MAGEA1P43355 309 aa10.33□□□□□ -0.76
SIX4-202ENST00000554079 IDI1Q13907 227 aa10.33□□□□□ -0.76
SIX4-202ENST00000554079 CERKLQ49MI3 558 aaPredicted RBP10.33□□□□□ -0.76
SIX4-202ENST00000554079 LRRC74BQ6ZQY2 392 aa10.33□□□□□ -0.76
SIX4-202ENST00000554079 MAP7D3Q8IWC1 876 aa10.33□□□□□ -0.76
SIX4-202ENST00000554079 SLC7A6OSQ96CW6 309 aaPredicted RBP10.33□□□□□ -0.76
SIX4-202ENST00000554079 SNX27Q96L92 541 aa10.33□□□□□ -0.76
SIX4-202ENST00000554079 SIKE1Q9BRV8 207 aa10.33□□□□□ -0.76
SIX4-202ENST00000554079 POLR3CQ9BUI4 534 aaPredicted RBP10.33□□□□□ -0.76
SIX4-202ENST00000554079 TBC1D10AQ9BXI6 508 aa10.33□□□□□ -0.76
SIX4-202ENST00000554079 ASCC2Q9H1I8 757 aaPredicted RBP10.33□□□□□ -0.76
SIX4-202ENST00000554079 EXOC1Q9NV70 894 aa10.33□□□□□ -0.76
SIX4-202ENST00000554079 TUBA8Q9NY65 449 aaPredicted RBP10.33□□□□□ -0.76
SIX4-202ENST00000554079 PTTG2Q9NZH5 202 aa10.33□□□□□ -0.76
SIX4-202ENST00000554079 DBF4Q9UBU7 674 aaPredicted RBP10.33□□□□□ -0.76
SIX4-202ENST00000554079 HEY1Q9Y5J3 304 aa10.33□□□□□ -0.76
SIX4-202ENST00000554079 WDR19Q8NEZ3 1342 aa10.32□□□□□ -0.76
SIX4-202ENST00000554079 TRIM49BA6NDI0 452 aa10.32□□□□□ -0.76
SIX4-202ENST00000554079 WNT7AO00755 349 aa10.32□□□□□ -0.76
SIX4-202ENST00000554079 DAPK3O43293 454 aa10.32□□□□□ -0.76
SIX4-202ENST00000554079 ZCCHC18P0CG32 403 aa10.32□□□□□ -0.76
SIX4-202ENST00000554079 ITGA6P23229 1130 aa10.32□□□□□ -0.76
SIX4-202ENST00000554079 EPHB2P29323 1055 aa10.32□□□□□ -0.76
SIX4-202ENST00000554079 TRPC1P48995 793 aa10.32□□□□□ -0.76
SIX4-202ENST00000554079 AP1B1Q10567 949 aa10.32□□□□□ -0.76
SIX4-202ENST00000554079 MAP7D1Q3KQU3 841 aa10.32□□□□□ -0.76
SIX4-202ENST00000554079 SMUG1Q53HV7 270 aa10.32□□□□□ -0.76
SIX4-202ENST00000554079 CFAP157Q5JU67 520 aa10.32□□□□□ -0.76
SIX4-202ENST00000554079 ZNF658Q5TYW1 1059 aaPredicted RBP10.32□□□□□ -0.76
SIX4-202ENST00000554079 PHLDB3Q6NSJ2 640 aa10.32□□□□□ -0.76
SIX4-202ENST00000554079 TYW1BQ6NUM6 668 aa10.32□□□□□ -0.76
SIX4-202ENST00000554079 ANKRD13CQ8N6S4 541 aa10.32□□□□□ -0.76
SIX4-202ENST00000554079 ZCRB1Q8TBF4 217 aaKnown RBP10.32□□□□□ -0.76
SIX4-202ENST00000554079 PHKBQ93100 1093 aa10.32□□□□□ -0.76
SIX4-202ENST00000554079 SUCLG2Q96I99 432 aa10.32□□□□□ -0.76
SIX4-202ENST00000554079 EPSTI1Q96J88 318 aa10.32□□□□□ -0.76
SIX4-202ENST00000554079 SRPK1Q96SB4 655 aaKnown RBP10.32□□□□□ -0.76
SIX4-202ENST00000554079 MYLK2Q9H1R3 596 aa10.32□□□□□ -0.76
SIX4-202ENST00000554079 TLE6Q9H808 572 aa10.32□□□□□ -0.76
SIX4-202ENST00000554079 FAIMQ9NVQ4 179 aa10.32□□□□□ -0.76
SIX4-202ENST00000554079 PLAGL2Q9UPG8 496 aa10.32□□□□□ -0.76
SIX4-202ENST00000554079 ZNF142P52746 1687 aaPredicted RBP10.32□□□□□ -0.76
SIX4-202ENST00000554079 MAST3O60307 1309 aa10.32□□□□□ -0.76
SIX4-202ENST00000554079 PNPLA7Q6ZV29 1317 aa10.32□□□□□ -0.76
SIX4-202ENST00000554079 ALKQ9UM73 1620 aa10.32□□□□□ -0.76
SIX4-202ENST00000554079 KANSL1LA0AUZ9 987 aa10.31□□□□□ -0.76
SIX4-202ENST00000554079 GOLGA8AA7E2F4 631 aa10.31□□□□□ -0.76
SIX4-202ENST00000554079 IQCJ-SCHIP1C9J366 451 aaPredicted RBP10.31□□□□□ -0.76
SIX4-202ENST00000554079 NDUFB5O43674 189 aa10.31□□□□□ -0.76
SIX4-202ENST00000554079 RANBP6O60518 1105 aaKnown RBP10.31□□□□□ -0.76
SIX4-202ENST00000554079 PALMO75781 387 aa10.31□□□□□ -0.76
SIX4-202ENST00000554079 EYA4O95677 639 aa10.31□□□□□ -0.76
SIX4-202ENST00000554079 FTCDO95954 541 aa10.31□□□□□ -0.76
SIX4-202ENST00000554079 CA8P35219 290 aa10.31□□□□□ -0.76
SIX4-202ENST00000554079 TXKP42681 527 aa10.31□□□□□ -0.76
SIX4-202ENST00000554079 GALK1P51570 392 aa10.31□□□□□ -0.76
SIX4-202ENST00000554079 R3HDM1Q15032 1099 aaKnown RBP10.31□□□□□ -0.76
SIX4-202ENST00000554079 NTRK3Q16288 839 aa10.31□□□□□ -0.76
SIX4-202ENST00000554079 C16orf87Q6PH81 154 aa10.31□□□□□ -0.76
SIX4-202ENST00000554079 SLC2A7Q6PXP3 512 aa10.31□□□□□ -0.76
SIX4-202ENST00000554079 PTF1AQ7RTS3 328 aa10.31□□□□□ -0.76
SIX4-202ENST00000554079 RIBC1Q8N443 379 aaPredicted RBP10.31□□□□□ -0.76
SIX4-202ENST00000554079 PDCD7Q8N8D1 485 aaKnown RBP10.31□□□□□ -0.76
SIX4-202ENST00000554079 RBM46Q8TBY0 533 aaKnown RBP10.31□□□□□ -0.76
SIX4-202ENST00000554079 DNAJC1Q96KC8 554 aaKnown RBP10.31□□□□□ -0.76
SIX4-202ENST00000554079 EPB41L1Q9H4G0 881 aa10.31□□□□□ -0.76
SIX4-202ENST00000554079 KRT82Q9NSB4 513 aa10.31□□□□□ -0.76
SIX4-202ENST00000554079 AIPL1Q9NZN9 384 aa10.31□□□□□ -0.76
SIX4-202ENST00000554079 SEC63Q9UGP8 760 aaKnown RBP10.31□□□□□ -0.76
SIX4-202ENST00000554079 SPO11Q9Y5K1 396 aa10.31□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms