RNA–Protein interactions for RNA: ENST00000553508.5

PCNX1-205, Transcript of pecanex 1, humanhuman

TSL 3

Gene PCNX1, Length 645 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX1-205ENST00000553508 KATNBL1Q9H079 304 aa9.5□□□□□ -0.89
PCNX1-205ENST00000553508 ACSS2Q9NR19 701 aa9.5□□□□□ -0.89
PCNX1-205ENST00000553508 H2AFY2Q9P0M6 372 aaPredicted RBP9.5□□□□□ -0.89
PCNX1-205ENST00000553508 ENPP3O14638 875 aa9.49□□□□□ -0.89
PCNX1-205ENST00000553508 PRRG2O14669 202 aa9.49□□□□□ -0.89
PCNX1-205ENST00000553508 GAS7O60861 476 aa9.49□□□□□ -0.89
PCNX1-205ENST00000553508 PLATP00750 562 aa9.49□□□□□ -0.89
PCNX1-205ENST00000553508 PPP2CBP62714 309 aa9.49□□□□□ -0.89
PCNX1-205ENST00000553508 PPP2CAP67775 309 aa9.49□□□□□ -0.89
PCNX1-205ENST00000553508 TOP3AQ13472 1001 aaPredicted RBP9.49□□□□□ -0.89
PCNX1-205ENST00000553508 USP10Q14694 798 aaKnown RBP9.49□□□□□ -0.89
PCNX1-205ENST00000553508 STILQ15468 1287 aa9.49□□□□□ -0.89
PCNX1-205ENST00000553508 RTN4RL1Q86UN2 441 aaPredicted RBP9.49□□□□□ -0.89
PCNX1-205ENST00000553508 CALML6Q8TD86 181 aa9.49□□□□□ -0.89
PCNX1-205ENST00000553508 FOXRED1Q96CU9 486 aaPredicted RBP9.49□□□□□ -0.89
PCNX1-205ENST00000553508 MFSD3Q96ES6 412 aa9.49□□□□□ -0.89
PCNX1-205ENST00000553508 CARD11Q9BXL7 1154 aa9.49□□□□□ -0.89
PCNX1-205ENST00000553508 PLAAQ9Y263 795 aa9.49□□□□□ -0.89
PCNX1-205ENST00000553508 ATP2A2P16615 1042 aaKnown RBP9.48□□□□□ -0.89
PCNX1-205ENST00000553508 MOGSQ13724 837 aa9.48□□□□□ -0.89
PCNX1-205ENST00000553508 SURF1Q15526 300 aa9.48□□□□□ -0.89
PCNX1-205ENST00000553508 CXXC5Q7LFL8 322 aaKnown RBP9.48□□□□□ -0.89
PCNX1-205ENST00000553508 REXO1L1PQ8IX06 675 aa9.48□□□□□ -0.89
PCNX1-205ENST00000553508 ELF4Q99607 663 aaPredicted RBP9.48□□□□□ -0.89
PCNX1-205ENST00000553508 OXSMQ9NWU1 459 aa9.48□□□□□ -0.89
PCNX1-205ENST00000553508 THG1LQ9NWX6 298 aaKnown RBP9.48□□□□□ -0.89
PCNX1-205ENST00000553508 TMA7Q9Y2S6 64 aaKnown RBP9.48□□□□□ -0.89
PCNX1-205ENST00000553508 K7ESM1 405 aa9.47□□□□□ -0.89
PCNX1-205ENST00000553508 CUTAO60888 179 aa9.47□□□□□ -0.89
PCNX1-205ENST00000553508 BUD31P41223 144 aaPredicted RBP9.47□□□□□ -0.89
PCNX1-205ENST00000553508 FNTBP49356 437 aa9.47□□□□□ -0.89
PCNX1-205ENST00000553508 SLC6A3Q01959 620 aa9.47□□□□□ -0.89
PCNX1-205ENST00000553508 ALDH6A1Q02252 535 aaKnown RBP9.47□□□□□ -0.89
PCNX1-205ENST00000553508 NOLC1Q14978 699 aaKnown RBP eCLIP9.47□□□□□ -0.89
PCNX1-205ENST00000553508 KANK2Q63ZY3 851 aa9.47□□□□□ -0.89
PCNX1-205ENST00000553508 GLB1LQ6UWU2 654 aa9.47□□□□□ -0.89
PCNX1-205ENST00000553508 IFNL2Q8IZJ0 200 aa9.47□□□□□ -0.89
PCNX1-205ENST00000553508 CHTF18Q8WVB6 975 aa9.47□□□□□ -0.89
PCNX1-205ENST00000553508 ZDHHC5Q9C0B5 715 aa9.47□□□□□ -0.89
PCNX1-205ENST00000553508 TOMM22Q9NS69 142 aa9.47□□□□□ -0.89
PCNX1-205ENST00000553508 MAGEL2Q9UJ55 1249 aa9.47□□□□□ -0.89
PCNX1-205ENST00000553508 NCANO14594 1321 aa9.47□□□□□ -0.89
PCNX1-205ENST00000553508 NPEPPSL1A6NEC2 478 aa9.46□□□□□ -0.9
PCNX1-205ENST00000553508 F2P00734 622 aa9.46□□□□□ -0.9
PCNX1-205ENST00000553508 HMGCRP04035 888 aa9.46□□□□□ -0.9
PCNX1-205ENST00000553508 ITGB3P05106 788 aa9.46□□□□□ -0.9
PCNX1-205ENST00000553508 MYCLP1P12525 358 aaPredicted RBP9.46□□□□□ -0.9
PCNX1-205ENST00000553508 POU3F2P20265 443 aaPredicted RBP9.46□□□□□ -0.9
PCNX1-205ENST00000553508 RGS3P49796 1198 aa9.46□□□□□ -0.9
PCNX1-205ENST00000553508 GYS2P54840 703 aa9.46□□□□□ -0.9
PCNX1-205ENST00000553508 CREB3L3Q68CJ9 461 aa9.46□□□□□ -0.9
PCNX1-205ENST00000553508 PPP4R1LQ9P1A2 415 aa9.46□□□□□ -0.9
PCNX1-205ENST00000553508 FBXO10Q9UK96 956 aa9.46□□□□□ -0.9
PCNX1-205ENST00000553508 A0A0G2JNJ9 132 aa9.45□□□□□ -0.9
PCNX1-205ENST00000553508 UBA6A0AVT1 1052 aaPredicted RBP9.45□□□□□ -0.9
PCNX1-205ENST00000553508 CYP17A1P05093 508 aa9.45□□□□□ -0.9
PCNX1-205ENST00000553508 APEX1P27695 318 aaKnown RBP9.45□□□□□ -0.9
PCNX1-205ENST00000553508 ETV4P43268 484 aa9.45□□□□□ -0.9
PCNX1-205ENST00000553508 SEPT7Q16181 437 aaKnown RBP9.45□□□□□ -0.9
PCNX1-205ENST00000553508 PLEKHG4Q58EX7 1191 aa9.45□□□□□ -0.9
PCNX1-205ENST00000553508 GRAMD4Q6IC98 578 aa9.45□□□□□ -0.9
PCNX1-205ENST00000553508 LARP4Q71RC2 724 aaKnown RBP eCLIP9.45□□□□□ -0.9
PCNX1-205ENST00000553508 AHI1Q8N157 1196 aa9.45□□□□□ -0.9
PCNX1-205ENST00000553508 PPM1KQ8N3J5 372 aa9.45□□□□□ -0.9
PCNX1-205ENST00000553508 LEO1Q8WVC0 666 aaPredicted RBP9.45□□□□□ -0.9
PCNX1-205ENST00000553508 E2F7Q96AV8 911 aa9.45□□□□□ -0.9
PCNX1-205ENST00000553508 LOXL4Q96JB6 756 aa9.45□□□□□ -0.9
PCNX1-205ENST00000553508 GPR101Q96P66 508 aaPredicted RBP9.45□□□□□ -0.9
PCNX1-205ENST00000553508 TUBGCP5Q96RT8 1024 aa9.45□□□□□ -0.9
PCNX1-205ENST00000553508 RBM15Q96T37 977 aaKnown RBP eCLIP9.45□□□□□ -0.9
PCNX1-205ENST00000553508 KIAA1683Q9H0B3 1180 aa9.45□□□□□ -0.9
PCNX1-205ENST00000553508 XPO5Q9HAV4 1204 aaKnown RBP eCLIP9.45□□□□□ -0.9
PCNX1-205ENST00000553508 Q9UFV3 132 aa9.45□□□□□ -0.9
PCNX1-205ENST00000553508 CNOT4O95628 575 aaKnown RBP9.44□□□□□ -0.9
PCNX1-205ENST00000553508 PRLP01236 227 aa9.44□□□□□ -0.9
PCNX1-205ENST00000553508 STAT5BP51692 787 aa9.44□□□□□ -0.9
PCNX1-205ENST00000553508 DSG1Q02413 1049 aa9.44□□□□□ -0.9
PCNX1-205ENST00000553508 SART3Q15020 963 aaKnown RBP9.44□□□□□ -0.9
PCNX1-205ENST00000553508 ZNF568Q3ZCX4 644 aa9.44□□□□□ -0.9
PCNX1-205ENST00000553508 PRAMEF9Q5VWM5 478 aa9.44□□□□□ -0.9
PCNX1-205ENST00000553508 SDE2Q6IQ49 451 aa9.44□□□□□ -0.9
PCNX1-205ENST00000553508 PRRT2Q7Z6L0 340 aaPredicted RBP9.44□□□□□ -0.9
PCNX1-205ENST00000553508 FILIP1Q7Z7B0 1213 aa9.44□□□□□ -0.9
PCNX1-205ENST00000553508 KIF18BQ86Y91 864 aa9.44□□□□□ -0.9
PCNX1-205ENST00000553508 C16orf92Q96LL3 132 aa9.44□□□□□ -0.9
PCNX1-205ENST00000553508 FOXB1Q99853 325 aa9.44□□□□□ -0.9
PCNX1-205ENST00000553508 ORAI3Q9BRQ5 295 aa9.44□□□□□ -0.9
PCNX1-205ENST00000553508 SPO11Q9Y5K1 396 aa9.44□□□□□ -0.9
PCNX1-205ENST00000553508 IGSF3O75054 1194 aa9.43□□□□□ -0.9
PCNX1-205ENST00000553508 SCNN1BP51168 640 aa9.43□□□□□ -0.9
PCNX1-205ENST00000553508 ROM1Q03395 351 aa9.43□□□□□ -0.9
PCNX1-205ENST00000553508 EIF4HQ15056 248 aaKnown RBP9.43□□□□□ -0.9
PCNX1-205ENST00000553508 TTC38Q5R3I4 469 aa9.43□□□□□ -0.9
PCNX1-205ENST00000553508 SLFN12LQ6IEE8 588 aa9.43□□□□□ -0.9
PCNX1-205ENST00000553508 ESRP1Q6NXG1 681 aaKnown RBP9.43□□□□□ -0.9
PCNX1-205ENST00000553508 MAML3Q96JK9 1138 aa9.43□□□□□ -0.9
PCNX1-205ENST00000553508 LRRC37BQ96QE4 947 aa9.43□□□□□ -0.9
PCNX1-205ENST00000553508 SLC4A7Q9Y6M7 1214 aa9.43□□□□□ -0.9
PCNX1-205ENST00000553508 A0A087X0B3 334 aa9.42□□□□□ -0.9
PCNX1-205ENST00000553508 PDE8AO60658 829 aa9.42□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms