RNA–Protein interactions for RNA: ENST00000551655.1

VPS29-209, Transcript of VPS29, retromer complex component, humanhuman

TSL 5

Gene VPS29, Length 766 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29-209ENST00000551655 BAZ2BQ9UIF8 2168 aaKnown RBP16.67■□□□□ 0.26
VPS29-209ENST00000551655 EOMESO95936 686 aa16.67■□□□□ 0.26
VPS29-209ENST00000551655 INSRRP14616 1297 aa16.67■□□□□ 0.26
VPS29-209ENST00000551655 LAG3P18627 525 aa16.67■□□□□ 0.26
VPS29-209ENST00000551655 CA8P35219 290 aa16.67■□□□□ 0.26
VPS29-209ENST00000551655 PLCB3Q01970 1234 aa16.67■□□□□ 0.26
VPS29-209ENST00000551655 C20orf194Q5TEA3 1177 aa16.67■□□□□ 0.26
VPS29-209ENST00000551655 LRRC55Q6ZSA7 311 aa16.67■□□□□ 0.26
VPS29-209ENST00000551655 RUBCNQ92622 972 aa16.67■□□□□ 0.26
VPS29-209ENST00000551655 GLG1Q92896 1179 aa16.67■□□□□ 0.26
VPS29-209ENST00000551655 ADAM2Q99965 735 aa16.67■□□□□ 0.26
VPS29-209ENST00000551655 SEMA4AQ9H3S1 761 aa16.67■□□□□ 0.26
VPS29-209ENST00000551655 CDHR5Q9HBB8 845 aa16.67■□□□□ 0.26
VPS29-209ENST00000551655 HELLSQ9NRZ9 838 aa16.67■□□□□ 0.26
VPS29-209ENST00000551655 ERAP1Q9NZ08 941 aa16.67■□□□□ 0.26
VPS29-209ENST00000551655 PKD2L1Q9P0L9 805 aa16.67■□□□□ 0.26
VPS29-209ENST00000551655 GINS2Q9Y248 185 aa16.67■□□□□ 0.26
VPS29-209ENST00000551655 SQORQ9Y6N5 450 aa16.67■□□□□ 0.26
VPS29-209ENST00000551655 LAMA4Q16363 1823 aa16.67■□□□□ 0.26
VPS29-209ENST00000551655 C2orf71A6NGG8 1288 aa16.66■□□□□ 0.26
VPS29-209ENST00000551655 B4E1Z4 1266 aa16.66■□□□□ 0.26
VPS29-209ENST00000551655 KLRF2D3W0D1 207 aa16.66■□□□□ 0.26
VPS29-209ENST00000551655 M0QZ92 97 aa16.66■□□□□ 0.26
VPS29-209ENST00000551655 STK25O00506 426 aa16.66■□□□□ 0.26
VPS29-209ENST00000551655 TDGQ13569 410 aa16.66■□□□□ 0.26
VPS29-209ENST00000551655 SPECC1Q5M775 1068 aa16.66■□□□□ 0.26
VPS29-209ENST00000551655 KIAA1841Q6NSI8 718 aa16.66■□□□□ 0.26
VPS29-209ENST00000551655 PIGSQ96S52 555 aa16.66■□□□□ 0.26
VPS29-209ENST00000551655 ZSCAN10Q96SZ4 725 aaPredicted RBP16.66■□□□□ 0.26
VPS29-209ENST00000551655 NGRNQ9NPE2 291 aaKnown RBP16.66■□□□□ 0.26
VPS29-209ENST00000551655 CYP26B1Q9NR63 512 aa16.66■□□□□ 0.26
VPS29-209ENST00000551655 PUF60Q9UHX1 559 aaKnown RBP16.66■□□□□ 0.26
VPS29-209ENST00000551655 DUSP12Q9UNI6 340 aa16.66■□□□□ 0.26
VPS29-209ENST00000551655 NOC2LQ9Y3T9 749 aaKnown RBP16.66■□□□□ 0.26
VPS29-209ENST00000551655 ZMYM6O95789 1325 aa16.66■□□□□ 0.26
VPS29-209ENST00000551655 KRBA1A5PL33 1030 aa16.65■□□□□ 0.26
VPS29-209ENST00000551655 C9IYK1 514 aa16.65■□□□□ 0.26
VPS29-209ENST00000551655 CFHP08603 1231 aa16.65■□□□□ 0.26
VPS29-209ENST00000551655 EPCAMP16422 314 aa16.65■□□□□ 0.26
VPS29-209ENST00000551655 MX1P20591 662 aa16.65■□□□□ 0.26
VPS29-209ENST00000551655 HNRNPUQ00839 825 aaKnown RBP eCLIP16.65■□□□□ 0.26
VPS29-209ENST00000551655 MCMDC2Q4G0Z9 681 aa16.65■□□□□ 0.26
VPS29-209ENST00000551655 KCNT2Q6UVM3 1135 aa16.65■□□□□ 0.26
VPS29-209ENST00000551655 IQCA1Q86XH1 822 aa16.65■□□□□ 0.26
VPS29-209ENST00000551655 PLCD3Q8N3E9 789 aa16.65■□□□□ 0.26
VPS29-209ENST00000551655 TMEM40Q8WWA1 233 aa16.65■□□□□ 0.26
VPS29-209ENST00000551655 C2orf16Q68DN1 1984 aa16.64■□□□□ 0.25
VPS29-209ENST00000551655 DENND3A2RUS2 1198 aa16.64■□□□□ 0.25
VPS29-209ENST00000551655 SP9P0CG40 484 aa16.64■□□□□ 0.25
VPS29-209ENST00000551655 PCP11498 1178 aaKnown RBP16.64■□□□□ 0.25
VPS29-209ENST00000551655 KCNA2P16389 499 aa16.64■□□□□ 0.25
VPS29-209ENST00000551655 KRT76Q01546 638 aa16.64■□□□□ 0.25
VPS29-209ENST00000551655 NMIQ13287 307 aaPredicted RBP16.64■□□□□ 0.25
VPS29-209ENST00000551655 SMC1AQ14683 1233 aaKnown RBP16.64■□□□□ 0.25
VPS29-209ENST00000551655 TMC5Q6UXY8 1006 aa16.64■□□□□ 0.25
VPS29-209ENST00000551655 MRPL43Q8N983 215 aaKnown RBP16.64■□□□□ 0.25
VPS29-209ENST00000551655 AUTS2Q8WXX7 1259 aa16.64■□□□□ 0.25
VPS29-209ENST00000551655 SEPT1Q8WYJ6 367 aa16.64■□□□□ 0.25
VPS29-209ENST00000551655 PPP1R16BQ96T49 567 aa16.64■□□□□ 0.25
VPS29-209ENST00000551655 PCYT2Q99447 389 aa16.64■□□□□ 0.25
VPS29-209ENST00000551655 SENP7Q9BQF6 1050 aa16.64■□□□□ 0.25
VPS29-209ENST00000551655 RNF41Q9H4P4 317 aaPredicted RBP16.64■□□□□ 0.25
VPS29-209ENST00000551655 KCNK12Q9HB15 430 aa16.64■□□□□ 0.25
VPS29-209ENST00000551655 RGS18Q9NS28 235 aa16.64■□□□□ 0.25
VPS29-209ENST00000551655 RNF19AQ9NV58 838 aa16.64■□□□□ 0.25
VPS29-209ENST00000551655 MAD2L2Q9UI95 211 aa16.64■□□□□ 0.25
VPS29-209ENST00000551655 USTQ9Y2C2 406 aa16.64■□□□□ 0.25
VPS29-209ENST00000551655 CCER2I3L3R5 266 aa16.63■□□□□ 0.25
VPS29-209ENST00000551655 STAM2O75886 525 aa16.63■□□□□ 0.25
VPS29-209ENST00000551655 DCNP07585 359 aaKnown RBP16.63■□□□□ 0.25
VPS29-209ENST00000551655 ATXN1P54253 815 aaKnown RBP16.63■□□□□ 0.25
VPS29-209ENST00000551655 PLCB4Q15147 1175 aa16.63■□□□□ 0.25
VPS29-209ENST00000551655 ATAT1Q5SQI0 421 aa16.63■□□□□ 0.25
VPS29-209ENST00000551655 SLC24A5Q71RS6 500 aa16.63■□□□□ 0.25
VPS29-209ENST00000551655 SAMD3Q8N6K7 520 aa16.63■□□□□ 0.25
VPS29-209ENST00000551655 SUMF1Q8NBK3 374 aa16.63■□□□□ 0.25
VPS29-209ENST00000551655 RSAD2Q8WXG1 361 aa16.63■□□□□ 0.25
VPS29-209ENST00000551655 PIBF1Q8WXW3 757 aa16.63■□□□□ 0.25
VPS29-209ENST00000551655 ZNF558Q96NG5 402 aa16.63■□□□□ 0.25
VPS29-209ENST00000551655 CASD1Q96PB1 797 aa16.63■□□□□ 0.25
VPS29-209ENST00000551655 ATP6V0A4Q9HBG4 840 aa16.63■□□□□ 0.25
VPS29-209ENST00000551655 ZSWIM5Q9P217 1185 aa16.63■□□□□ 0.25
VPS29-209ENST00000551655 CA14Q9ULX7 337 aa16.63■□□□□ 0.25
VPS29-209ENST00000551655 PCDHA2Q9Y5H9 948 aa16.63■□□□□ 0.25
VPS29-209ENST00000551655 POTEMA6NI47 508 aa16.62■□□□□ 0.25
VPS29-209ENST00000551655 POTEGQ6S5H5 508 aa16.62■□□□□ 0.25
VPS29-209ENST00000551655 SMARCAD1Q9H4L7 1026 aa16.62■□□□□ 0.25
VPS29-209ENST00000551655 ST3GAL5Q9UNP4 418 aa16.62■□□□□ 0.25
VPS29-209ENST00000551655 KDM3AQ9Y4C1 1321 aa16.62■□□□□ 0.25
VPS29-209ENST00000551655 DCDC2BA2VCK2 349 aa16.61■□□□□ 0.25
VPS29-209ENST00000551655 RRN3P2A6NIE6 340 aa16.61■□□□□ 0.25
VPS29-209ENST00000551655 NT5C1B-RDH14C9J2C7 533 aa16.61■□□□□ 0.25
VPS29-209ENST00000551655 RPS6KA5O75582 802 aa16.61■□□□□ 0.25
VPS29-209ENST00000551655 RFX1P22670 979 aa16.61■□□□□ 0.25
VPS29-209ENST00000551655 KRT17Q04695 432 aa16.61■□□□□ 0.25
VPS29-209ENST00000551655 PCNX4Q63HM2 1172 aa16.61■□□□□ 0.25
VPS29-209ENST00000551655 XRRA1Q6P2D8 792 aa16.61■□□□□ 0.25
VPS29-209ENST00000551655 USP17L6PQ6QN14 398 aa16.61■□□□□ 0.25
VPS29-209ENST00000551655 EVI5LQ96CN4 794 aa16.61■□□□□ 0.25
VPS29-209ENST00000551655 CHMP4BQ9H444 224 aaKnown RBP16.61■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms