RNA–Protein interactions for RNA: ENST00000549396.5

PPFIA2-216, Transcript of PTPRF interacting protein alpha 2, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PPFIA2, Length 5,363 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA2-216ENST00000549396 TMEM35BQ8NCS4 154 aa9.99□□□□□ -0.81
PPFIA2-216ENST00000549396 GMCL1P1Q8NEA9 526 aa9.99□□□□□ -0.81
PPFIA2-216ENST00000549396 SH3TC2Q8TF17 1288 aa9.99□□□□□ -0.81
PPFIA2-216ENST00000549396 ATRIPQ8WXE1 791 aa9.99□□□□□ -0.81
PPFIA2-216ENST00000549396 RUBCNQ92622 972 aa9.99□□□□□ -0.81
PPFIA2-216ENST00000549396 RBM41Q96IZ5 413 aaKnown RBP9.99□□□□□ -0.81
PPFIA2-216ENST00000549396 NDST4Q9H3R1 872 aa9.99□□□□□ -0.81
PPFIA2-216ENST00000549396 EIF4ENIF1Q9NRA8 985 aaKnown RBP9.99□□□□□ -0.81
PPFIA2-216ENST00000549396 IL18RAPO95256 599 aa9.99□□□□□ -0.81
PPFIA2-216ENST00000549396 MAPK4P31152 587 aa9.99□□□□□ -0.81
PPFIA2-216ENST00000549396 PRPF31Q8WWY3 499 aaKnown RBP9.99□□□□□ -0.81
PPFIA2-216ENST00000549396 KRT12Q99456 494 aa9.99□□□□□ -0.81
PPFIA2-216ENST00000549396 SLC38A10Q9HBR0 1119 aa9.99□□□□□ -0.81
PPFIA2-216ENST00000549396 SDAD1Q9NVU7 687 aaKnown RBP eCLIP9.99□□□□□ -0.81
PPFIA2-216ENST00000549396 IPO5O00410 1097 aaKnown RBP9.99□□□□□ -0.81
PPFIA2-216ENST00000549396 PDXKO00764 312 aa9.99□□□□□ -0.81
PPFIA2-216ENST00000549396 TNPO2O14787 897 aaKnown RBP9.99□□□□□ -0.81
PPFIA2-216ENST00000549396 MCF2LO15068 1137 aa9.99□□□□□ -0.81
PPFIA2-216ENST00000549396 P4HA2O15460 535 aa9.99□□□□□ -0.81
PPFIA2-216ENST00000549396 ZNF500O60304 480 aaPredicted RBP9.99□□□□□ -0.81
PPFIA2-216ENST00000549396 OAZ1P54368 228 aa9.99□□□□□ -0.81
PPFIA2-216ENST00000549396 LRRC8AQ8IWT6 810 aa9.99□□□□□ -0.81
PPFIA2-216ENST00000549396 SMC1BQ8NDV3 1235 aa9.99□□□□□ -0.81
PPFIA2-216ENST00000549396 JPH1Q9HDC5 661 aaPredicted RBP9.99□□□□□ -0.81
PPFIA2-216ENST00000549396 SLC38A7Q9NVC3 462 aa9.99□□□□□ -0.81
PPFIA2-216ENST00000549396 PCDHB6Q9Y5E3 794 aa9.99□□□□□ -0.81
PPFIA2-216ENST00000549396 A0A1W2PQC6 194 aa9.99□□□□□ -0.81
PPFIA2-216ENST00000549396 GYS1P13807 737 aa9.99□□□□□ -0.81
PPFIA2-216ENST00000549396 RASSF2P50749 326 aa9.99□□□□□ -0.81
PPFIA2-216ENST00000549396 TFDP2Q14188 446 aa9.99□□□□□ -0.81
PPFIA2-216ENST00000549396 DNAJC21Q5F1R6 531 aaKnown RBP9.99□□□□□ -0.81
PPFIA2-216ENST00000549396 TCP11X2Q5H9J9 407 aa9.99□□□□□ -0.81
PPFIA2-216ENST00000549396 RSRC2Q7L4I2 434 aaKnown RBP9.99□□□□□ -0.81
PPFIA2-216ENST00000549396 VSTM4Q8IW00 320 aa9.99□□□□□ -0.81
PPFIA2-216ENST00000549396 ANKRD26Q9UPS8 1709 aa9.98□□□□□ -0.81
PPFIA2-216ENST00000549396 CCDC188H7C350 402 aa9.98□□□□□ -0.81
PPFIA2-216ENST00000549396 EIF3DO15371 548 aaKnown RBP eCLIP9.98□□□□□ -0.81
PPFIA2-216ENST00000549396 HUS1O60921 280 aa9.98□□□□□ -0.81
PPFIA2-216ENST00000549396 RHOXF2BP0C7M4 288 aa9.98□□□□□ -0.81
PPFIA2-216ENST00000549396 HSPA8P11142 646 aaKnown RBP9.98□□□□□ -0.81
PPFIA2-216ENST00000549396 FCGRTP55899 365 aa9.98□□□□□ -0.81
PPFIA2-216ENST00000549396 KCNQ4P56696 695 aa9.98□□□□□ -0.81
PPFIA2-216ENST00000549396 CAV1Q03135 178 aa9.98□□□□□ -0.81
PPFIA2-216ENST00000549396 BIRC2Q13490 618 aa9.98□□□□□ -0.81
PPFIA2-216ENST00000549396 SCARF1Q14162 830 aa9.98□□□□□ -0.81
PPFIA2-216ENST00000549396 KNOP1Q1ED39 458 aaKnown RBP9.98□□□□□ -0.81
PPFIA2-216ENST00000549396 HOMEZQ8IX15 550 aa9.98□□□□□ -0.81
PPFIA2-216ENST00000549396 GPRC5AQ8NFJ5 357 aa9.98□□□□□ -0.81
PPFIA2-216ENST00000549396 ZNF653Q96CK0 615 aa9.98□□□□□ -0.81
PPFIA2-216ENST00000549396 RHOXF2Q9BQY4 288 aa9.98□□□□□ -0.81
PPFIA2-216ENST00000549396 TMEM106CQ9BVX2 250 aa9.98□□□□□ -0.81
PPFIA2-216ENST00000549396 BHMT2Q9H2M3 363 aa9.98□□□□□ -0.81
PPFIA2-216ENST00000549396 S100BP04271 92 aaPredicted RBP9.98□□□□□ -0.81
PPFIA2-216ENST00000549396 AKR1B1P15121 316 aa9.98□□□□□ -0.81
PPFIA2-216ENST00000549396 CPT1AP50416 773 aa9.98□□□□□ -0.81
PPFIA2-216ENST00000549396 LAMC2Q13753 1193 aa9.98□□□□□ -0.81
PPFIA2-216ENST00000549396 GLE1Q53GS7 698 aaKnown RBP9.98□□□□□ -0.81
PPFIA2-216ENST00000549396 CD302Q8IX05 232 aa9.98□□□□□ -0.81
PPFIA2-216ENST00000549396 PITPNM2Q9BZ72 1349 aa9.98□□□□□ -0.81
PPFIA2-216ENST00000549396 ZMYM2Q9UBW7 1377 aa9.98□□□□□ -0.81
PPFIA2-216ENST00000549396 CYP2D6P10635 497 aa9.98□□□□□ -0.81
PPFIA2-216ENST00000549396 DPEP1P16444 411 aa9.98□□□□□ -0.81
PPFIA2-216ENST00000549396 SLC26A2P50443 739 aa9.98□□□□□ -0.81
PPFIA2-216ENST00000549396 IRX4P78413 519 aa9.98□□□□□ -0.81
PPFIA2-216ENST00000549396 TFAMQ00059 246 aaKnown RBP9.98□□□□□ -0.81
PPFIA2-216ENST00000549396 NR5A1Q13285 461 aa9.98□□□□□ -0.81
PPFIA2-216ENST00000549396 PCGF5Q86SE9 256 aa9.98□□□□□ -0.81
PPFIA2-216ENST00000549396 GIMAP7Q8NHV1 300 aa9.98□□□□□ -0.81
PPFIA2-216ENST00000549396 PPP4R1Q8TF05 950 aa9.98□□□□□ -0.81
PPFIA2-216ENST00000549396 SEPT1Q8WYJ6 367 aa9.98□□□□□ -0.81
PPFIA2-216ENST00000549396 OTUD5Q96G74 571 aa9.98□□□□□ -0.81
PPFIA2-216ENST00000549396 PHF20Q9BVI0 1012 aa9.98□□□□□ -0.81
PPFIA2-216ENST00000549396 TROVE2P10155 538 aaKnown RBP eCLIP9.98□□□□□ -0.81
PPFIA2-216ENST00000549396 U2AF2P26368 475 aaKnown RBP eCLIP9.98□□□□□ -0.81
PPFIA2-216ENST00000549396 HOXA10P31260 410 aaPredicted RBP9.98□□□□□ -0.81
PPFIA2-216ENST00000549396 LRMPQ12912 555 aa9.98□□□□□ -0.81
PPFIA2-216ENST00000549396 SLMAPQ14BN4 828 aa9.98□□□□□ -0.81
PPFIA2-216ENST00000549396 TAF1CQ15572 869 aaPredicted RBP9.98□□□□□ -0.81
PPFIA2-216ENST00000549396 NUDT18Q6ZVK8 323 aa9.98□□□□□ -0.81
PPFIA2-216ENST00000549396 ERO1BQ86YB8 467 aa9.98□□□□□ -0.81
PPFIA2-216ENST00000549396 MYRIPQ8NFW9 859 aa9.98□□□□□ -0.81
PPFIA2-216ENST00000549396 STAMQ92783 540 aa9.98□□□□□ -0.81
PPFIA2-216ENST00000549396 GMCL1Q96IK5 515 aa9.98□□□□□ -0.81
PPFIA2-216ENST00000549396 SPATA33Q96N06 139 aa9.98□□□□□ -0.81
PPFIA2-216ENST00000549396 MED4Q9NPJ6 270 aa9.98□□□□□ -0.81
PPFIA2-216ENST00000549396 STAP1Q9ULZ2 295 aa9.98□□□□□ -0.81
PPFIA2-216ENST00000549396 CYP2D7A0A087X1C5 515 aa9.97□□□□□ -0.81
PPFIA2-216ENST00000549396 GGPS1O95749 300 aa9.97□□□□□ -0.81
PPFIA2-216ENST00000549396 XPAP23025 273 aaPredicted RBP9.97□□□□□ -0.81
PPFIA2-216ENST00000549396 REM2Q8IYK8 340 aaPredicted RBP9.97□□□□□ -0.81
PPFIA2-216ENST00000549396 GPD1LQ8N335 351 aa9.97□□□□□ -0.81
PPFIA2-216ENST00000549396 RASGRP4Q8TDF6 673 aa9.97□□□□□ -0.81
PPFIA2-216ENST00000549396 SCFD2Q8WU76 684 aa9.97□□□□□ -0.81
PPFIA2-216ENST00000549396 ASNSD1Q9NWL6 643 aa9.97□□□□□ -0.81
PPFIA2-216ENST00000549396 ANAPC5Q9UJX4 755 aa9.97□□□□□ -0.81
PPFIA2-216ENST00000549396 LGALS16A8MUM7 142 aa9.97□□□□□ -0.81
PPFIA2-216ENST00000549396 PGRMC1O00264 195 aaKnown RBP9.97□□□□□ -0.81
PPFIA2-216ENST00000549396 PSMD14O00487 310 aa9.97□□□□□ -0.81
PPFIA2-216ENST00000549396 KCNK3O14649 394 aa9.97□□□□□ -0.81
PPFIA2-216ENST00000549396 PRPSAP2O60256 369 aa9.97□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms