RNA–Protein interactions for RNA: ENST00000549034.1

RAB5B-205, Transcript of RAB5B, member RAS oncogene family, humanhuman

TSL 2

Gene RAB5B, Length 558 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5B-205ENST00000549034 DNAJB3Q8WWF6 145 aa10.75□□□□□ -0.69
RAB5B-205ENST00000549034 DHX38Q92620 1227 aaKnown RBP10.75□□□□□ -0.69
RAB5B-205ENST00000549034 WNT8BQ93098 351 aa10.75□□□□□ -0.69
RAB5B-205ENST00000549034 SCLYQ96I15 445 aa10.75□□□□□ -0.69
RAB5B-205ENST00000549034 CEP170P1Q96L14 293 aa10.75□□□□□ -0.69
RAB5B-205ENST00000549034 USP28Q96RU2 1077 aa10.75□□□□□ -0.69
RAB5B-205ENST00000549034 LXNQ9BS40 222 aa10.75□□□□□ -0.69
RAB5B-205ENST00000549034 POLR3CQ9BUI4 534 aaPredicted RBP10.75□□□□□ -0.69
RAB5B-205ENST00000549034 FTOQ9C0B1 505 aaKnown RBP eCLIP10.75□□□□□ -0.69
RAB5B-205ENST00000549034 FAM49AQ9H0Q0 323 aaPredicted RBP10.75□□□□□ -0.69
RAB5B-205ENST00000549034 SUGCTQ9HAC7 445 aa10.75□□□□□ -0.69
RAB5B-205ENST00000549034 TUFT1Q9NNX1 390 aa10.75□□□□□ -0.69
RAB5B-205ENST00000549034 WRAP73Q9P2S5 460 aaPredicted RBP10.75□□□□□ -0.69
RAB5B-205ENST00000549034 TUBE1Q9UJT0 475 aa10.75□□□□□ -0.69
RAB5B-205ENST00000549034 PCDHA2Q9Y5H9 948 aa10.75□□□□□ -0.69
RAB5B-205ENST00000549034 STK24Q9Y6E0 443 aa10.75□□□□□ -0.69
RAB5B-205ENST00000549034 MKI67P46013 3256 aaKnown RBP10.75□□□□□ -0.69
RAB5B-205ENST00000549034 MBLAC1A4D2B0 266 aaPredicted RBP10.74□□□□□ -0.69
RAB5B-205ENST00000549034 RSPH10B2B2RC85 870 aa10.74□□□□□ -0.69
RAB5B-205ENST00000549034 ZBTB42B2RXF5 422 aa10.74□□□□□ -0.69
RAB5B-205ENST00000549034 MED24O75448 989 aa10.74□□□□□ -0.69
RAB5B-205ENST00000549034 BRD1O95696 1058 aa10.74□□□□□ -0.69
RAB5B-205ENST00000549034 RSPH10BP0C881 870 aa10.74□□□□□ -0.69
RAB5B-205ENST00000549034 SPATA31C1P0DKV0 1188 aa10.74□□□□□ -0.69
RAB5B-205ENST00000549034 CSF2RAP15509 400 aa10.74□□□□□ -0.69
RAB5B-205ENST00000549034 CD44P16070 742 aaKnown RBP10.74□□□□□ -0.69
RAB5B-205ENST00000549034 SELPP16109 830 aa10.74□□□□□ -0.69
RAB5B-205ENST00000549034 RPA1P27694 616 aa10.74□□□□□ -0.69
RAB5B-205ENST00000549034 YWHABP31946 246 aaKnown RBP10.74□□□□□ -0.69
RAB5B-205ENST00000549034 NPEPPSP55786 919 aa10.74□□□□□ -0.69
RAB5B-205ENST00000549034 FPGSQ05932 587 aa10.74□□□□□ -0.69
RAB5B-205ENST00000549034 PTPAQ15257 358 aa10.74□□□□□ -0.69
RAB5B-205ENST00000549034 ZRSR1Q15695 479 aaKnown RBP10.74□□□□□ -0.69
RAB5B-205ENST00000549034 TRIM71Q2Q1W2 868 aaKnown RBP10.74□□□□□ -0.69
RAB5B-205ENST00000549034 XKR9Q5GH70 373 aa10.74□□□□□ -0.69
RAB5B-205ENST00000549034 KRT79Q5XKE5 535 aa10.74□□□□□ -0.69
RAB5B-205ENST00000549034 PLA2G4FQ68DD2 849 aa10.74□□□□□ -0.69
RAB5B-205ENST00000549034 TAF2Q6P1X5 1199 aa10.74□□□□□ -0.69
RAB5B-205ENST00000549034 ANO5Q75V66 913 aa10.74□□□□□ -0.69
RAB5B-205ENST00000549034 DEFB128Q7Z7B8 93 aa10.74□□□□□ -0.69
RAB5B-205ENST00000549034 RPUSD2Q8IZ73 545 aaKnown RBP10.74□□□□□ -0.69
RAB5B-205ENST00000549034 IGSF22Q8N9C0 903 aa10.74□□□□□ -0.69
RAB5B-205ENST00000549034 PIGOQ8TEQ8 1089 aa10.74□□□□□ -0.69
RAB5B-205ENST00000549034 NACC1Q96RE7 527 aa10.74□□□□□ -0.69
RAB5B-205ENST00000549034 UBE2OQ9C0C9 1292 aaKnown RBP10.74□□□□□ -0.69
RAB5B-205ENST00000549034 ZDHHC9Q9Y397 364 aa10.74□□□□□ -0.69
RAB5B-205ENST00000549034 COL1A2P08123 1366 aa10.74□□□□□ -0.69
RAB5B-205ENST00000549034 PDE4DIPQ5VU43 2346 aa10.74□□□□□ -0.69
RAB5B-205ENST00000549034 SMIM35A0A1B0GVV1 85 aa10.73□□□□□ -0.69
RAB5B-205ENST00000549034 PP2D1A8MPX8 630 aa10.73□□□□□ -0.69
RAB5B-205ENST00000549034 HAX1O00165 279 aa10.73□□□□□ -0.69
RAB5B-205ENST00000549034 ACRP10323 421 aa10.73□□□□□ -0.69
RAB5B-205ENST00000549034 XRCC6P12956 609 aaKnown RBP eCLIP10.73□□□□□ -0.69
RAB5B-205ENST00000549034 TMOD1P28289 359 aa10.73□□□□□ -0.69
RAB5B-205ENST00000549034 TBC1D8BQ0IIM8 1120 aa10.73□□□□□ -0.69
RAB5B-205ENST00000549034 TMEM62Q0P6H9 643 aa10.73□□□□□ -0.69
RAB5B-205ENST00000549034 PPIGQ13427 754 aaKnown RBP eCLIP10.73□□□□□ -0.69
RAB5B-205ENST00000549034 SLC39A14Q15043 492 aa10.73□□□□□ -0.69
RAB5B-205ENST00000549034 STK38Q15208 465 aa10.73□□□□□ -0.69
RAB5B-205ENST00000549034 TARBP2Q15633 366 aaKnown RBP10.73□□□□□ -0.69
RAB5B-205ENST00000549034 PRPF38BQ5VTL8 546 aaKnown RBP10.73□□□□□ -0.69
RAB5B-205ENST00000549034 IER5Q5VY09 327 aa10.73□□□□□ -0.69
RAB5B-205ENST00000549034 HAUS3Q68CZ6 603 aa10.73□□□□□ -0.69
RAB5B-205ENST00000549034 LRRC8DQ7L1W4 858 aa10.73□□□□□ -0.69
RAB5B-205ENST00000549034 NME8Q8N427 588 aa10.73□□□□□ -0.69
RAB5B-205ENST00000549034 ZNF579Q8NAF0 562 aaKnown RBP10.73□□□□□ -0.69
RAB5B-205ENST00000549034 SNX29Q8TEQ0 813 aa10.73□□□□□ -0.69
RAB5B-205ENST00000549034 GDF15Q99988 308 aa10.73□□□□□ -0.69
RAB5B-205ENST00000549034 WNT8AQ9H1J5 351 aa10.73□□□□□ -0.69
RAB5B-205ENST00000549034 CYP26B1Q9NR63 512 aa10.73□□□□□ -0.69
RAB5B-205ENST00000549034 ANKEF1Q9NU02 776 aa10.73□□□□□ -0.69
RAB5B-205ENST00000549034 CFAP45Q9UL16 551 aa10.73□□□□□ -0.69
RAB5B-205ENST00000549034 KIAA1024Q9UPX6 916 aa10.73□□□□□ -0.69
RAB5B-205ENST00000549034 SCN5AQ14524 2016 aa10.72□□□□□ -0.69
RAB5B-205ENST00000549034 M0QZ92 97 aa10.72□□□□□ -0.69
RAB5B-205ENST00000549034 LYPLA2O95372 231 aa10.72□□□□□ -0.69
RAB5B-205ENST00000549034 C22orf31O95567 290 aa10.72□□□□□ -0.69
RAB5B-205ENST00000549034 FGBP02675 491 aa10.72□□□□□ -0.69
RAB5B-205ENST00000549034 CHRNA1P02708 482 aa10.72□□□□□ -0.69
RAB5B-205ENST00000549034 CTSHP09668 335 aa10.72□□□□□ -0.69
RAB5B-205ENST00000549034 BMP8BP34820 402 aa10.72□□□□□ -0.69
RAB5B-205ENST00000549034 LONP1P36776 959 aaKnown RBP10.72□□□□□ -0.69
RAB5B-205ENST00000549034 UBA7P41226 1012 aa10.72□□□□□ -0.69
RAB5B-205ENST00000549034 DNM2P50570 870 aa10.72□□□□□ -0.69
RAB5B-205ENST00000549034 NUCB2P80303 420 aa10.72□□□□□ -0.69
RAB5B-205ENST00000549034 DNM1Q05193 864 aaKnown RBP10.72□□□□□ -0.69
RAB5B-205ENST00000549034 GRIN1Q05586 938 aa10.72□□□□□ -0.69
RAB5B-205ENST00000549034 ECM1Q16610 540 aa10.72□□□□□ -0.69
RAB5B-205ENST00000549034 SPECC1Q5M775 1068 aa10.72□□□□□ -0.69
RAB5B-205ENST00000549034 EXOC8Q8IYI6 725 aa10.72□□□□□ -0.69
RAB5B-205ENST00000549034 KIAA0319LQ8IZA0 1049 aa10.72□□□□□ -0.69
RAB5B-205ENST00000549034 LRRC71Q8N4P6 559 aa10.72□□□□□ -0.69
RAB5B-205ENST00000549034 LINC00301Q8NCQ3 95 aa10.72□□□□□ -0.69
RAB5B-205ENST00000549034 CCDC43Q96MW1 224 aaKnown RBP10.72□□□□□ -0.69
RAB5B-205ENST00000549034 PLIN2Q99541 437 aa10.72□□□□□ -0.69
RAB5B-205ENST00000549034 CSRNP2Q9H175 543 aa10.72□□□□□ -0.69
RAB5B-205ENST00000549034 IL23AQ9NPF7 189 aa10.72□□□□□ -0.69
RAB5B-205ENST00000549034 DNM3Q9UQ16 869 aa10.72□□□□□ -0.69
RAB5B-205ENST00000549034 COLQQ9Y215 455 aaPredicted RBP10.72□□□□□ -0.69
RAB5B-205ENST00000549034 AKT3Q9Y243 479 aa10.72□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms