RNA–Protein interactions for RNA: ENST00000546304.1

PRKDC-211, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 2

Gene PRKDC, Length 589 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-211ENST00000546304 GCOM1H8Y6P7 765 aaPredicted RBP7.25□□□□□ -1.25
PRKDC-211ENST00000546304 COBLO75128 1261 aa7.25□□□□□ -1.25
PRKDC-211ENST00000546304 MICAL2O94851 1124 aa7.25□□□□□ -1.25
PRKDC-211ENST00000546304 CFBP00751 764 aa7.25□□□□□ -1.25
PRKDC-211ENST00000546304 PGK2P07205 417 aa7.25□□□□□ -1.25
PRKDC-211ENST00000546304 HOXC6P09630 235 aa7.25□□□□□ -1.25
PRKDC-211ENST00000546304 POLR2MP0CAP2 368 aa7.25□□□□□ -1.25
PRKDC-211ENST00000546304 FDPSP14324 419 aaKnown RBP7.25□□□□□ -1.25
PRKDC-211ENST00000546304 CALML3P27482 149 aa7.25□□□□□ -1.25
PRKDC-211ENST00000546304 HOXD10P28358 340 aa7.25□□□□□ -1.25
PRKDC-211ENST00000546304 HOXA13P31271 388 aaPredicted RBP7.25□□□□□ -1.25
PRKDC-211ENST00000546304 ARSDP51689 593 aa7.25□□□□□ -1.25
PRKDC-211ENST00000546304 PRMT2P55345 433 aa7.25□□□□□ -1.25
PRKDC-211ENST00000546304 BAATQ14032 418 aaPredicted RBP7.25□□□□□ -1.25
PRKDC-211ENST00000546304 COX20Q5RI15 118 aa7.25□□□□□ -1.25
PRKDC-211ENST00000546304 RAB44Q7Z6P3 723 aaPredicted RBP7.25□□□□□ -1.25
PRKDC-211ENST00000546304 TEX2Q8IWB9 1127 aa7.25□□□□□ -1.25
PRKDC-211ENST00000546304 FAM177A1Q8N128 213 aaPredicted RBP7.25□□□□□ -1.25
PRKDC-211ENST00000546304 FAM133AQ8N9E0 248 aa7.25□□□□□ -1.25
PRKDC-211ENST00000546304 RGS22Q8NE09 1264 aa7.25□□□□□ -1.25
PRKDC-211ENST00000546304 RAET1EQ8TD07 263 aa7.25□□□□□ -1.25
PRKDC-211ENST00000546304 USP6NLQ92738 828 aa7.25□□□□□ -1.25
PRKDC-211ENST00000546304 IFT43Q96FT9 208 aa7.25□□□□□ -1.25
PRKDC-211ENST00000546304 FGD4Q96M96 766 aa7.25□□□□□ -1.25
PRKDC-211ENST00000546304 ALG1Q9BT22 464 aa7.25□□□□□ -1.25
PRKDC-211ENST00000546304 MAF1Q9H063 256 aa7.25□□□□□ -1.25
PRKDC-211ENST00000546304 PSTPIP2Q9H939 334 aa7.25□□□□□ -1.25
PRKDC-211ENST00000546304 SH3GLB2Q9NR46 395 aa7.25□□□□□ -1.25
PRKDC-211ENST00000546304 SLC5A4Q9NY91 659 aa7.25□□□□□ -1.25
PRKDC-211ENST00000546304 COL20A1Q9P218 1284 aa7.25□□□□□ -1.25
PRKDC-211ENST00000546304 GABRQQ9UN88 632 aa7.25□□□□□ -1.25
PRKDC-211ENST00000546304 KIF3AQ9Y496 699 aa7.25□□□□□ -1.25
PRKDC-211ENST00000546304 ZSCAN21Q9Y5A6 473 aaPredicted RBP7.25□□□□□ -1.25
PRKDC-211ENST00000546304 PTCH2Q9Y6C5 1203 aa7.25□□□□□ -1.25
PRKDC-211ENST00000546304 ASTN1O14525 1302 aa7.25□□□□□ -1.25
PRKDC-211ENST00000546304 FRMPD4Q14CM0 1322 aa7.25□□□□□ -1.25
PRKDC-211ENST00000546304 DOCK5Q9H7D0 1870 aa7.24□□□□□ -1.25
PRKDC-211ENST00000546304 MEIS2O14770 477 aa7.24□□□□□ -1.25
PRKDC-211ENST00000546304 IGHA1P01876 353 aa7.24□□□□□ -1.25
PRKDC-211ENST00000546304 HMGCRP04035 888 aa7.24□□□□□ -1.25
PRKDC-211ENST00000546304 HSP90AA1P07900 732 aaKnown RBP7.24□□□□□ -1.25
PRKDC-211ENST00000546304 XRCC5P13010 732 aaKnown RBP7.24□□□□□ -1.25
PRKDC-211ENST00000546304 XBP1P17861 261 aa7.24□□□□□ -1.25
PRKDC-211ENST00000546304 CYP2B6P20813 491 aa7.24□□□□□ -1.25
PRKDC-211ENST00000546304 COL8A1P27658 744 aa7.24□□□□□ -1.25
PRKDC-211ENST00000546304 GRNP28799 593 aaKnown RBP7.24□□□□□ -1.25
PRKDC-211ENST00000546304 ADH7P40394 386 aa7.24□□□□□ -1.25
PRKDC-211ENST00000546304 CNTN2Q02246 1040 aa7.24□□□□□ -1.25
PRKDC-211ENST00000546304 CCINQ13939 588 aa7.24□□□□□ -1.25
PRKDC-211ENST00000546304 TRIM29Q14134 588 aa7.24□□□□□ -1.25
PRKDC-211ENST00000546304 UBE2SQ16763 222 aa7.24□□□□□ -1.25
PRKDC-211ENST00000546304 ZNF792Q3KQV3 632 aa7.24□□□□□ -1.25
PRKDC-211ENST00000546304 USP17L6PQ6QN14 398 aa7.24□□□□□ -1.25
PRKDC-211ENST00000546304 DPP9Q86TI2 863 aa7.24□□□□□ -1.25
PRKDC-211ENST00000546304 REXO1Q8N1G1 1221 aaKnown RBP7.24□□□□□ -1.25
PRKDC-211ENST00000546304 SAMD3Q8N6K7 520 aa7.24□□□□□ -1.25
PRKDC-211ENST00000546304 FAM184AQ8NB25 1140 aa7.24□□□□□ -1.25
PRKDC-211ENST00000546304 NPLOC4Q8TAT6 608 aa7.24□□□□□ -1.25
PRKDC-211ENST00000546304 BICD2Q8TD16 824 aa7.24□□□□□ -1.25
PRKDC-211ENST00000546304 SYTL5Q8TDW5 730 aaPredicted RBP7.24□□□□□ -1.25
PRKDC-211ENST00000546304 TRIB2Q92519 343 aa7.24□□□□□ -1.25
PRKDC-211ENST00000546304 BHMTQ93088 406 aa7.24□□□□□ -1.25
PRKDC-211ENST00000546304 INTS4Q96HW7 963 aaKnown RBP7.24□□□□□ -1.25
PRKDC-211ENST00000546304 MAML3Q96JK9 1138 aa7.24□□□□□ -1.25
PRKDC-211ENST00000546304 ZMYND12Q9H0C1 365 aa7.24□□□□□ -1.25
PRKDC-211ENST00000546304 GLT8D2Q9H1C3 349 aa7.24□□□□□ -1.25
PRKDC-211ENST00000546304 RIC8AQ9NPQ8 531 aa7.24□□□□□ -1.25
PRKDC-211ENST00000546304 GJD2Q9UKL4 321 aa7.24□□□□□ -1.25
PRKDC-211ENST00000546304 SMC3Q9UQE7 1217 aa7.24□□□□□ -1.25
PRKDC-211ENST00000546304 SYNGAP1Q96PV0 1343 aa7.24□□□□□ -1.25
PRKDC-211ENST00000546304 SMCO2A6NFE2 343 aa7.23□□□□□ -1.25
PRKDC-211ENST00000546304 SPDYE3A6NKU9 549 aa7.23□□□□□ -1.25
PRKDC-211ENST00000546304 ELNP15502 786 aa7.23□□□□□ -1.25
PRKDC-211ENST00000546304 EIF2AK2P19525 551 aaKnown RBP7.23□□□□□ -1.25
PRKDC-211ENST00000546304 EDNRBP24530 442 aa7.23□□□□□ -1.25
PRKDC-211ENST00000546304 GJB2P29033 226 aa7.23□□□□□ -1.25
PRKDC-211ENST00000546304 GNA11P29992 359 aa7.23□□□□□ -1.25
PRKDC-211ENST00000546304 ANP32AP39687 249 aaKnown RBP7.23□□□□□ -1.25
PRKDC-211ENST00000546304 ALDH5A1P51649 535 aaPredicted RBP7.23□□□□□ -1.25
PRKDC-211ENST00000546304 MRPL12P52815 198 aaKnown RBP7.23□□□□□ -1.25
PRKDC-211ENST00000546304 NLRP5P59047 1200 aa7.23□□□□□ -1.25
PRKDC-211ENST00000546304 AP3B2Q13367 1082 aa7.23□□□□□ -1.25
PRKDC-211ENST00000546304 BECN1Q14457 450 aa7.23□□□□□ -1.25
PRKDC-211ENST00000546304 NPY5RQ15761 445 aa7.23□□□□□ -1.25
PRKDC-211ENST00000546304 PKN2Q16513 984 aaKnown RBP7.23□□□□□ -1.25
PRKDC-211ENST00000546304 CCL14Q16627 93 aa7.23□□□□□ -1.25
PRKDC-211ENST00000546304 SLC9C1Q4G0N8 1177 aa7.23□□□□□ -1.25
PRKDC-211ENST00000546304 OLFML2BQ68BL8 750 aa7.23□□□□□ -1.25
PRKDC-211ENST00000546304 GALNT17Q6IS24 598 aa7.23□□□□□ -1.25
PRKDC-211ENST00000546304 FBXO46Q6PJ61 603 aaPredicted RBP7.23□□□□□ -1.25
PRKDC-211ENST00000546304 ARMCX2Q7L311 632 aa7.23□□□□□ -1.25
PRKDC-211ENST00000546304 DAGLBQ8NCG7 672 aa7.23□□□□□ -1.25
PRKDC-211ENST00000546304 DNERQ8NFT8 737 aa7.23□□□□□ -1.25
PRKDC-211ENST00000546304 TBC1D5Q92609 795 aa7.23□□□□□ -1.25
PRKDC-211ENST00000546304 C8orf76Q96K31 380 aa7.23□□□□□ -1.25
PRKDC-211ENST00000546304 RMDN3Q96TC7 470 aa7.23□□□□□ -1.25
PRKDC-211ENST00000546304 PHF20Q9BVI0 1012 aa7.23□□□□□ -1.25
PRKDC-211ENST00000546304 ANO3Q9BYT9 981 aa7.23□□□□□ -1.25
PRKDC-211ENST00000546304 BRMS1Q9HCU9 246 aa7.23□□□□□ -1.25
PRKDC-211ENST00000546304 C6orf50Q9HD87 102 aa7.23□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms