RNA–Protein interactions for RNA: ENST00000544610.1

CDCA3-209, Transcript of cell division cycle associated 3, humanhuman

TSL 3

Gene CDCA3, Length 624 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3-209ENST00000544610 NASPP49321 788 aaPredicted RBP7.45□□□□□ -1.22
CDCA3-209ENST00000544610 ZNF200P98182 395 aaPredicted RBP7.45□□□□□ -1.22
CDCA3-209ENST00000544610 AP3B2Q13367 1082 aa7.45□□□□□ -1.22
CDCA3-209ENST00000544610 NPY5RQ15761 445 aa7.45□□□□□ -1.22
CDCA3-209ENST00000544610 SLC35G1Q2M3R5 365 aa7.45□□□□□ -1.22
CDCA3-209ENST00000544610 HSDL1Q3SXM5 330 aa7.45□□□□□ -1.22
CDCA3-209ENST00000544610 TMEM31Q5JXX7 168 aa7.45□□□□□ -1.22
CDCA3-209ENST00000544610 CELF3Q5SZQ8 465 aaKnown RBP7.45□□□□□ -1.22
CDCA3-209ENST00000544610 MYSM1Q5VVJ2 828 aa7.45□□□□□ -1.22
CDCA3-209ENST00000544610 KCNV1Q6PIU1 500 aa7.45□□□□□ -1.22
CDCA3-209ENST00000544610 MOXD1Q6UVY6 613 aa7.45□□□□□ -1.22
CDCA3-209ENST00000544610 Q6ZNB5 142 aa7.45□□□□□ -1.22
CDCA3-209ENST00000544610 KRT25Q7Z3Z0 450 aa7.45□□□□□ -1.22
CDCA3-209ENST00000544610 SERINC5Q86VE9 423 aa7.45□□□□□ -1.22
CDCA3-209ENST00000544610 DHX37Q8IY37 1157 aaKnown RBP7.45□□□□□ -1.22
CDCA3-209ENST00000544610 DIS3L2Q8IYB7 885 aaKnown RBP7.45□□□□□ -1.22
CDCA3-209ENST00000544610 BANK1Q8NDB2 785 aa7.45□□□□□ -1.22
CDCA3-209ENST00000544610 KCNG4Q8TDN1 519 aa7.45□□□□□ -1.22
CDCA3-209ENST00000544610 TNFRSF25Q93038 417 aa7.45□□□□□ -1.22
CDCA3-209ENST00000544610 PDCD2LQ9BRP1 358 aa7.45□□□□□ -1.22
CDCA3-209ENST00000544610 UBE2ZQ9H832 354 aaPredicted RBP7.45□□□□□ -1.22
CDCA3-209ENST00000544610 RIC8AQ9NPQ8 531 aa7.45□□□□□ -1.22
CDCA3-209ENST00000544610 C11orf16Q9NQ32 467 aa7.45□□□□□ -1.22
CDCA3-209ENST00000544610 RTEL1Q9NZ71 1219 aa7.45□□□□□ -1.22
CDCA3-209ENST00000544610 MTUS1Q9ULD2 1270 aa7.45□□□□□ -1.22
CDCA3-209ENST00000544610 CEP131Q9UPN4 1083 aa7.45□□□□□ -1.22
CDCA3-209ENST00000544610 HCN4Q9Y3Q4 1203 aa7.45□□□□□ -1.22
CDCA3-209ENST00000544610 INSL6Q9Y581 213 aa7.45□□□□□ -1.22
CDCA3-209ENST00000544610 SIP14410 1827 aa7.45□□□□□ -1.22
CDCA3-209ENST00000544610 TCF20Q9UGU0 1960 aaKnown RBP7.44□□□□□ -1.22
CDCA3-209ENST00000544610 PI4K2BG5E9Z4 385 aa7.44□□□□□ -1.22
CDCA3-209ENST00000544610 GGPS1O95749 300 aa7.44□□□□□ -1.22
CDCA3-209ENST00000544610 AMHP03971 560 aa7.44□□□□□ -1.22
CDCA3-209ENST00000544610 TGFB3P10600 412 aa7.44□□□□□ -1.22
CDCA3-209ENST00000544610 UBA1P22314 1058 aaKnown RBP7.44□□□□□ -1.22
CDCA3-209ENST00000544610 NAPAP54920 295 aa7.44□□□□□ -1.22
CDCA3-209ENST00000544610 NLRP5P59047 1200 aa7.44□□□□□ -1.22
CDCA3-209ENST00000544610 HTRA4P83105 476 aaPredicted RBP7.44□□□□□ -1.22
CDCA3-209ENST00000544610 SP2Q02086 613 aa7.44□□□□□ -1.22
CDCA3-209ENST00000544610 PKP1Q13835 747 aa7.44□□□□□ -1.22
CDCA3-209ENST00000544610 PGM5Q15124 567 aa7.44□□□□□ -1.22
CDCA3-209ENST00000544610 LEXMQ3ZCV2 418 aa7.44□□□□□ -1.22
CDCA3-209ENST00000544610 PLEKHG4Q58EX7 1191 aa7.44□□□□□ -1.22
CDCA3-209ENST00000544610 WWC2Q6AWC2 1192 aa7.44□□□□□ -1.22
CDCA3-209ENST00000544610 FAM117BQ6P1L5 589 aa7.44□□□□□ -1.22
CDCA3-209ENST00000544610 TMEM92Q6UXU6 159 aa7.44□□□□□ -1.22
CDCA3-209ENST00000544610 LIN28BQ6ZN17 250 aaKnown RBP eCLIP7.44□□□□□ -1.22
CDCA3-209ENST00000544610 VSIG10LQ86VR7 867 aa7.44□□□□□ -1.22
CDCA3-209ENST00000544610 BLIDQ8IZY5 108 aa7.44□□□□□ -1.22
CDCA3-209ENST00000544610 REXO1Q8N1G1 1221 aaKnown RBP7.44□□□□□ -1.22
CDCA3-209ENST00000544610 TET1Q8NFU7 2136 aa7.44□□□□□ -1.22
CDCA3-209ENST00000544610 IL31RAQ8NI17 732 aa7.44□□□□□ -1.22
CDCA3-209ENST00000544610 CUL5Q93034 780 aa7.44□□□□□ -1.22
CDCA3-209ENST00000544610 SPATA33Q96N06 139 aa7.44□□□□□ -1.22
CDCA3-209ENST00000544610 PIGSQ96S52 555 aa7.44□□□□□ -1.22
CDCA3-209ENST00000544610 C17orf80Q9BSJ5 609 aa7.44□□□□□ -1.22
CDCA3-209ENST00000544610 C16orf70Q9BSU1 422 aa7.44□□□□□ -1.22
CDCA3-209ENST00000544610 VAT1LQ9HCJ6 419 aa7.44□□□□□ -1.22
CDCA3-209ENST00000544610 CD320Q9NPF0 282 aa7.44□□□□□ -1.22
CDCA3-209ENST00000544610 RCOR1Q9UKL0 485 aa7.44□□□□□ -1.22
CDCA3-209ENST00000544610 NOL7Q9UMY1 257 aaKnown RBP7.44□□□□□ -1.22
CDCA3-209ENST00000544610 PCDHA1Q9Y5I3 950 aa7.44□□□□□ -1.22
CDCA3-209ENST00000544610 PRRC2BQ5JSZ5 2229 aaKnown RBP7.43□□□□□ -1.22
CDCA3-209ENST00000544610 C17orf102A2RUQ5 167 aa7.43□□□□□ -1.22
CDCA3-209ENST00000544610 SMCO2A6NFE2 343 aa7.43□□□□□ -1.22
CDCA3-209ENST00000544610 RSPH10B2B2RC85 870 aa7.43□□□□□ -1.22
CDCA3-209ENST00000544610 RBAK-RBAKDNI3L0D1 243 aa7.43□□□□□ -1.22
CDCA3-209ENST00000544610 SORBS3O60504 671 aa7.43□□□□□ -1.22
CDCA3-209ENST00000544610 CAND2O75155 1236 aa7.43□□□□□ -1.22
CDCA3-209ENST00000544610 PPP6R2O75170 966 aa7.43□□□□□ -1.22
CDCA3-209ENST00000544610 MBD3O95983 291 aa7.43□□□□□ -1.22
CDCA3-209ENST00000544610 OATP04181 439 aa7.43□□□□□ -1.22
CDCA3-209ENST00000544610 RSPH10BP0C881 870 aa7.43□□□□□ -1.22
CDCA3-209ENST00000544610 MYCLP12524 364 aaPredicted RBP7.43□□□□□ -1.22
CDCA3-209ENST00000544610 GCFC2P16383 781 aaKnown RBP7.43□□□□□ -1.22
CDCA3-209ENST00000544610 KCNA5P22460 613 aa7.43□□□□□ -1.22
CDCA3-209ENST00000544610 CCND2P30279 289 aa7.43□□□□□ -1.22
CDCA3-209ENST00000544610 HOXA13P31271 388 aaPredicted RBP7.43□□□□□ -1.22
CDCA3-209ENST00000544610 THPOP40225 353 aa7.43□□□□□ -1.22
CDCA3-209ENST00000544610 RFC5P40937 340 aa7.43□□□□□ -1.22
CDCA3-209ENST00000544610 USP11P51784 963 aa7.43□□□□□ -1.22
CDCA3-209ENST00000544610 ADCY7P51828 1080 aa7.43□□□□□ -1.22
CDCA3-209ENST00000544610 GNL2Q13823 731 aaKnown RBP7.43□□□□□ -1.22
CDCA3-209ENST00000544610 ARL6IP4Q66PJ3 421 aaKnown RBP7.43□□□□□ -1.22
CDCA3-209ENST00000544610 PPP4R3AQ6IN85 833 aa7.43□□□□□ -1.22
CDCA3-209ENST00000544610 XRRA1Q6P2D8 792 aa7.43□□□□□ -1.22
CDCA3-209ENST00000544610 HEATR3Q7Z4Q2 680 aa7.43□□□□□ -1.22
CDCA3-209ENST00000544610 RAB11FIP4Q86YS3 637 aa7.43□□□□□ -1.22
CDCA3-209ENST00000544610 FAM178BQ8IXR5 827 aa7.43□□□□□ -1.22
CDCA3-209ENST00000544610 MYOCDQ8IZQ8 938 aa7.43□□□□□ -1.22
CDCA3-209ENST00000544610 DBF4BQ8NFT6 615 aa7.43□□□□□ -1.22
CDCA3-209ENST00000544610 GADD45GIP1Q8TAE8 222 aaPredicted RBP7.43□□□□□ -1.22
CDCA3-209ENST00000544610 NLRP7Q8WX94 980 aa7.43□□□□□ -1.22
CDCA3-209ENST00000544610 GPKOWQ92917 476 aaPredicted RBP eCLIP7.43□□□□□ -1.22
CDCA3-209ENST00000544610 MRPL38Q96DV4 380 aaKnown RBP7.43□□□□□ -1.22
CDCA3-209ENST00000544610 SAMD11Q96NU1 681 aa7.43□□□□□ -1.22
CDCA3-209ENST00000544610 PSTPIP2Q9H939 334 aa7.43□□□□□ -1.22
CDCA3-209ENST00000544610 EHMT1Q9H9B1 1298 aa7.43□□□□□ -1.22
CDCA3-209ENST00000544610 VPS54Q9P1Q0 977 aa7.43□□□□□ -1.22
CDCA3-209ENST00000544610 FRMPD4Q14CM0 1322 aa7.43□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 62.1 ms