RNA–Protein interactions for RNA: ENST00000542029.1

VTN-203, Transcript of vitronectin, humanhuman

TSL 3

Gene VTN, Length 501 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTN-203ENST00000542029 LENG9Q96B70 501 aa12.89□□□□□ -0.35
VTN-203ENST00000542029 ZNF689Q96CS4 500 aaPredicted RBP12.89□□□□□ -0.35
VTN-203ENST00000542029 RC3H2Q9HBD1 1191 aaKnown RBP12.89□□□□□ -0.35
VTN-203ENST00000542029 NCOA5Q9HCD5 579 aaKnown RBP12.89□□□□□ -0.35
VTN-203ENST00000542029 DISC1Q9NRI5 854 aa12.89□□□□□ -0.35
VTN-203ENST00000542029 C1orf112Q9NSG2 853 aa12.89□□□□□ -0.35
VTN-203ENST00000542029 NRBP2Q9NSY0 501 aa12.89□□□□□ -0.35
VTN-203ENST00000542029 PDRG1Q9NUG6 133 aa12.89□□□□□ -0.35
VTN-203ENST00000542029 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP12.88□□□□□ -0.35
VTN-203ENST00000542029 GAS7O60861 476 aa12.88□□□□□ -0.35
VTN-203ENST00000542029 XBP1P17861 261 aa12.88□□□□□ -0.35
VTN-203ENST00000542029 JAK3P52333 1124 aa12.88□□□□□ -0.35
VTN-203ENST00000542029 CRYBB1P53674 252 aaPredicted RBP12.88□□□□□ -0.35
VTN-203ENST00000542029 TMEM62Q0P6H9 643 aa12.88□□□□□ -0.35
VTN-203ENST00000542029 NFX1Q12986 1120 aaKnown RBP12.88□□□□□ -0.35
VTN-203ENST00000542029 LEXMQ3ZCV2 418 aa12.88□□□□□ -0.35
VTN-203ENST00000542029 MOXD1Q6UVY6 613 aa12.88□□□□□ -0.35
VTN-203ENST00000542029 DAGLBQ8NCG7 672 aa12.88□□□□□ -0.35
VTN-203ENST00000542029 ZBTB10Q96DT7 871 aa12.88□□□□□ -0.35
VTN-203ENST00000542029 MAP7D2Q96T17 732 aa12.88□□□□□ -0.35
VTN-203ENST00000542029 TEKT3Q9BXF9 490 aa12.88□□□□□ -0.35
VTN-203ENST00000542029 NSUN3Q9H649 340 aaKnown RBP12.88□□□□□ -0.35
VTN-203ENST00000542029 GABBR1Q9UBS5 961 aa12.88□□□□□ -0.35
VTN-203ENST00000542029 LRFN2Q9ULH4 789 aa12.88□□□□□ -0.35
VTN-203ENST00000542029 GINS2Q9Y248 185 aa12.88□□□□□ -0.35
VTN-203ENST00000542029 COL4A6Q14031 1691 aa12.88□□□□□ -0.35
VTN-203ENST00000542029 CYP3A7-CYP3A51PA0A087WV96 503 aa12.87□□□□□ -0.35
VTN-203ENST00000542029 ZBTB42B2RXF5 422 aa12.87□□□□□ -0.35
VTN-203ENST00000542029 MSH4O15457 936 aa12.87□□□□□ -0.35
VTN-203ENST00000542029 PPFIA3O75145 1194 aa12.87□□□□□ -0.35
VTN-203ENST00000542029 C22orf31O95567 290 aa12.87□□□□□ -0.35
VTN-203ENST00000542029 ATP4AP20648 1035 aa12.87□□□□□ -0.35
VTN-203ENST00000542029 CYP3A7P24462 503 aa12.87□□□□□ -0.35
VTN-203ENST00000542029 ANAPC15P60006 121 aa12.87□□□□□ -0.35
VTN-203ENST00000542029 CDC42EP1Q00587 391 aa12.87□□□□□ -0.35
VTN-203ENST00000542029 ANKRD1Q15327 319 aa12.87□□□□□ -0.35
VTN-203ENST00000542029 Q4G0T1 1027 aa12.87□□□□□ -0.35
VTN-203ENST00000542029 RTN4RL1Q86UN2 441 aaPredicted RBP12.87□□□□□ -0.35
VTN-203ENST00000542029 BLIDQ8IZY5 108 aa12.87□□□□□ -0.35
VTN-203ENST00000542029 CRIPAKQ8N1N5 446 aa12.87□□□□□ -0.35
VTN-203ENST00000542029 METTL13Q8N6R0 699 aa12.87□□□□□ -0.35
VTN-203ENST00000542029 TBCKQ8TEA7 893 aa12.87□□□□□ -0.35
VTN-203ENST00000542029 LINC01599Q8WXQ3 324 aa12.87□□□□□ -0.35
VTN-203ENST00000542029 SLC5A5Q92911 643 aa12.87□□□□□ -0.35
VTN-203ENST00000542029 P2RX5Q93086 422 aa12.87□□□□□ -0.35
VTN-203ENST00000542029 PPP2R3CQ969Q6 453 aa12.87□□□□□ -0.35
VTN-203ENST00000542029 C1QTNF1Q9BXJ1 281 aa12.87□□□□□ -0.35
VTN-203ENST00000542029 UPF3BQ9BZI7 483 aaKnown RBP12.87□□□□□ -0.35
VTN-203ENST00000542029 PPP4R2Q9NY27 417 aa12.87□□□□□ -0.35
VTN-203ENST00000542029 FAM50BQ9Y247 325 aa12.87□□□□□ -0.35
VTN-203ENST00000542029 PCDHB7Q9Y5E2 793 aa12.87□□□□□ -0.35
VTN-203ENST00000542029 DENND3A2RUS2 1198 aa12.86□□□□□ -0.35
VTN-203ENST00000542029 ADAMTS3O15072 1205 aa12.86□□□□□ -0.35
VTN-203ENST00000542029 KCNA5P22460 613 aa12.86□□□□□ -0.35
VTN-203ENST00000542029 SARSP49591 514 aaKnown RBP12.86□□□□□ -0.35
VTN-203ENST00000542029 LRCH2Q5VUJ6 765 aa12.86□□□□□ -0.35
VTN-203ENST00000542029 SLC24A5Q71RS6 500 aa12.86□□□□□ -0.35
VTN-203ENST00000542029 KRT25Q7Z3Z0 450 aa12.86□□□□□ -0.35
VTN-203ENST00000542029 PABPC5Q96DU9 382 aaKnown RBP12.86□□□□□ -0.35
VTN-203ENST00000542029 SLKQ9H2G2 1235 aaPredicted RBP12.86□□□□□ -0.35
VTN-203ENST00000542029 ERVK-5Q9HDB9 667 aa12.86□□□□□ -0.35
VTN-203ENST00000542029 SPTBN5Q9NRC6 3674 aaKnown RBP12.86□□□□□ -0.35
VTN-203ENST00000542029 GBF1Q92538 1859 aa12.85□□□□□ -0.35
VTN-203ENST00000542029 OATP04181 439 aa12.85□□□□□ -0.35
VTN-203ENST00000542029 LINC00271P0C7V0 271 aa12.85□□□□□ -0.35
VTN-203ENST00000542029 COL19A1Q14993 1142 aa12.85□□□□□ -0.35
VTN-203ENST00000542029 NONOQ15233 471 aaKnown RBP eCLIP12.85□□□□□ -0.35
VTN-203ENST00000542029 TMEM266Q2M3C6 531 aa12.85□□□□□ -0.35
VTN-203ENST00000542029 TCEAL5Q5H9L2 206 aa12.85□□□□□ -0.35
VTN-203ENST00000542029 MIER3Q7Z3K6 550 aa12.85□□□□□ -0.35
VTN-203ENST00000542029 NEK9Q8TD19 979 aa12.85□□□□□ -0.35
VTN-203ENST00000542029 NECAB3Q96P71 396 aaPredicted RBP12.85□□□□□ -0.35
VTN-203ENST00000542029 UIMC1Q96RL1 719 aa12.85□□□□□ -0.35
VTN-203ENST00000542029 NAP1L4Q99733 375 aaKnown RBP12.85□□□□□ -0.35
VTN-203ENST00000542029 ADAM2Q99965 735 aa12.85□□□□□ -0.35
VTN-203ENST00000542029 TMX1Q9H3N1 280 aa12.85□□□□□ -0.35
VTN-203ENST00000542029 AAASQ9NRG9 546 aa12.85□□□□□ -0.35
VTN-203ENST00000542029 RGS18Q9NS28 235 aa12.85□□□□□ -0.35
VTN-203ENST00000542029 ST3GAL5Q9UNP4 418 aa12.85□□□□□ -0.35
VTN-203ENST00000542029 NOC2LQ9Y3T9 749 aaKnown RBP12.85□□□□□ -0.35
VTN-203ENST00000542029 MUC3AQ02505 3323 aa12.85□□□□□ -0.35
VTN-203ENST00000542029 CCDC194A0A1B0GVG4 234 aa12.84□□□□□ -0.35
VTN-203ENST00000542029 M0R2N6 131 aa12.84□□□□□ -0.35
VTN-203ENST00000542029 HOXA2O43364 376 aa12.84□□□□□ -0.35
VTN-203ENST00000542029 EDIL3O43854 480 aa12.84□□□□□ -0.35
VTN-203ENST00000542029 DKC1O60832 514 aaKnown RBP eCLIP12.84□□□□□ -0.35
VTN-203ENST00000542029 GPR32O75388 356 aa12.84□□□□□ -0.35
VTN-203ENST00000542029 PSMD10O75832 226 aa12.84□□□□□ -0.35
VTN-203ENST00000542029 MMP1P03956 469 aa12.84□□□□□ -0.35
VTN-203ENST00000542029 GCFC2P16383 781 aaKnown RBP12.84□□□□□ -0.35
VTN-203ENST00000542029 EIF4BP23588 611 aaKnown RBP12.84□□□□□ -0.35
VTN-203ENST00000542029 PRKCEQ02156 737 aa12.84□□□□□ -0.35
VTN-203ENST00000542029 TBC1D8BQ0IIM8 1120 aa12.84□□□□□ -0.35
VTN-203ENST00000542029 STK3Q13188 491 aa12.84□□□□□ -0.35
VTN-203ENST00000542029 CSPP1Q1MSJ5 1256 aa12.84□□□□□ -0.35
VTN-203ENST00000542029 KIZQ2M2Z5 673 aa12.84□□□□□ -0.35
VTN-203ENST00000542029 XKR3Q5GH77 459 aa12.84□□□□□ -0.35
VTN-203ENST00000542029 EFCAB12Q6NXP0 572 aa12.84□□□□□ -0.35
VTN-203ENST00000542029 TRMT1LQ7Z2T5 733 aaKnown RBP12.84□□□□□ -0.35
VTN-203ENST00000542029 WASF1Q92558 559 aa12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms