RNA–Protein interactions for RNA: ENST00000541488.1

PRKDC-210, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 3

Gene PRKDC, Length 719 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-210ENST00000541488 ZNF568Q3ZCX4 644 aa5.9□□□□□ -1.46
PRKDC-210ENST00000541488 TMEM177Q53S58 311 aa5.9□□□□□ -1.46
PRKDC-210ENST00000541488 TAX1BP1Q86VP1 789 aa5.9□□□□□ -1.46
PRKDC-210ENST00000541488 ZNF575Q86XF7 245 aa5.9□□□□□ -1.46
PRKDC-210ENST00000541488 WDR48Q8TAF3 677 aa5.9□□□□□ -1.46
PRKDC-210ENST00000541488 ASB15Q8WXK1 588 aa5.9□□□□□ -1.46
PRKDC-210ENST00000541488 GBP4Q96PP9 640 aa5.9□□□□□ -1.46
PRKDC-210ENST00000541488 MRPL4Q9BYD3 311 aaKnown RBP5.9□□□□□ -1.46
PRKDC-210ENST00000541488 KATNBL1Q9H079 304 aa5.9□□□□□ -1.46
PRKDC-210ENST00000541488 TRIM39Q9HCM9 518 aa5.9□□□□□ -1.46
PRKDC-210ENST00000541488 M0R2C6 588 aa5.89□□□□□ -1.47
PRKDC-210ENST00000541488 FOXP2O15409 715 aa5.89□□□□□ -1.47
PRKDC-210ENST00000541488 HIP1RO75146 1068 aa5.89□□□□□ -1.47
PRKDC-210ENST00000541488 AMHP03971 560 aa5.89□□□□□ -1.47
PRKDC-210ENST00000541488 HMGCRP04035 888 aa5.89□□□□□ -1.47
PRKDC-210ENST00000541488 IRF9Q00978 393 aa5.89□□□□□ -1.47
PRKDC-210ENST00000541488 SQSTM1Q13501 440 aa5.89□□□□□ -1.47
PRKDC-210ENST00000541488 LARP4Q71RC2 724 aaKnown RBP eCLIP5.89□□□□□ -1.47
PRKDC-210ENST00000541488 REXO1L1PQ8IX06 675 aa5.89□□□□□ -1.47
PRKDC-210ENST00000541488 JMYQ8N9B5 988 aa5.89□□□□□ -1.47
PRKDC-210ENST00000541488 MRFAP1L1Q96HT8 127 aa5.89□□□□□ -1.47
PRKDC-210ENST00000541488 KLC2Q9H0B6 622 aa5.89□□□□□ -1.47
PRKDC-210ENST00000541488 CD248Q9HCU0 757 aa5.89□□□□□ -1.47
PRKDC-210ENST00000541488 KCNH7Q9NS40 1196 aa5.89□□□□□ -1.47
PRKDC-210ENST00000541488 MAGEL2Q9UJ55 1249 aa5.89□□□□□ -1.47
PRKDC-210ENST00000541488 SLC4A7Q9Y6M7 1214 aa5.89□□□□□ -1.47
PRKDC-210ENST00000541488 PPP1R12AO14974 1030 aaPredicted RBP5.88□□□□□ -1.47
PRKDC-210ENST00000541488 FOXS1O43638 330 aa5.88□□□□□ -1.47
PRKDC-210ENST00000541488 OPA1O60313 960 aa5.88□□□□□ -1.47
PRKDC-210ENST00000541488 ECE1P42892 770 aa5.88□□□□□ -1.47
PRKDC-210ENST00000541488 STAT5BP51692 787 aa5.88□□□□□ -1.47
PRKDC-210ENST00000541488 HERVK_113P62684 666 aa5.88□□□□□ -1.47
PRKDC-210ENST00000541488 ZNF460Q14592 562 aa5.88□□□□□ -1.47
PRKDC-210ENST00000541488 NFE2L2Q16236 605 aa5.88□□□□□ -1.47
PRKDC-210ENST00000541488 TBR1Q16650 682 aa5.88□□□□□ -1.47
PRKDC-210ENST00000541488 C21orf62-AS1Q17RA5 79 aa5.88□□□□□ -1.47
PRKDC-210ENST00000541488 TCTN3Q6NUS6 607 aa5.88□□□□□ -1.47
PRKDC-210ENST00000541488 SH3TC2Q8TF17 1288 aa5.88□□□□□ -1.47
PRKDC-210ENST00000541488 NEIL1Q96FI4 390 aaPredicted RBP5.88□□□□□ -1.47
PRKDC-210ENST00000541488 WWC2-AS2Q96NR7 200 aa5.88□□□□□ -1.47
PRKDC-210ENST00000541488 DPYSL5Q9BPU6 564 aa5.88□□□□□ -1.47
PRKDC-210ENST00000541488 C12orf65Q9H3J6 166 aaKnown RBP5.88□□□□□ -1.47
PRKDC-210ENST00000541488 SAMD15Q9P1V8 674 aa5.88□□□□□ -1.47
PRKDC-210ENST00000541488 FAM184BQ9ULE4 1060 aa5.88□□□□□ -1.47
PRKDC-210ENST00000541488 CCDC163A0A0D9SF12 145 aa5.87□□□□□ -1.47
PRKDC-210ENST00000541488 PLD2O14939 933 aa5.87□□□□□ -1.47
PRKDC-210ENST00000541488 ZNF623O75123 536 aa5.87□□□□□ -1.47
PRKDC-210ENST00000541488 GLRX3O76003 335 aaKnown RBP5.87□□□□□ -1.47
PRKDC-210ENST00000541488 RAC3P60763 192 aa5.87□□□□□ -1.47
PRKDC-210ENST00000541488 MOGSQ13724 837 aa5.87□□□□□ -1.47
PRKDC-210ENST00000541488 CCDC144BQ3MJ40 725 aa5.87□□□□□ -1.47
PRKDC-210ENST00000541488 FILIP1Q7Z7B0 1213 aa5.87□□□□□ -1.47
PRKDC-210ENST00000541488 Q8TCH9 128 aa5.87□□□□□ -1.47
PRKDC-210ENST00000541488 WNK4Q96J92 1243 aa5.87□□□□□ -1.47
PRKDC-210ENST00000541488 BTBD2Q9BX70 525 aa5.87□□□□□ -1.47
PRKDC-210ENST00000541488 ZDHHC5Q9C0B5 715 aa5.87□□□□□ -1.47
PRKDC-210ENST00000541488 ZFR2Q9UPR6 939 aaKnown RBP5.87□□□□□ -1.47
PRKDC-210ENST00000541488 NR2E1Q9Y466 385 aa5.87□□□□□ -1.47
PRKDC-210ENST00000541488 TCAF1Q9Y4C2 921 aa5.87□□□□□ -1.47
PRKDC-210ENST00000541488 TNPO3Q9Y5L0 923 aaKnown RBP5.87□□□□□ -1.47
PRKDC-210ENST00000541488 TNFRSF18Q9Y5U5 241 aa5.87□□□□□ -1.47
PRKDC-210ENST00000541488 PATE3B3GLJ2 98 aa5.86□□□□□ -1.47
PRKDC-210ENST00000541488 CDC14BO60729 498 aa5.86□□□□□ -1.47
PRKDC-210ENST00000541488 CUTAO60888 179 aa5.86□□□□□ -1.47
PRKDC-210ENST00000541488 ASMTLO95671 621 aa5.86□□□□□ -1.47
PRKDC-210ENST00000541488 ETV4P43268 484 aa5.86□□□□□ -1.47
PRKDC-210ENST00000541488 KIF11P52732 1056 aa5.86□□□□□ -1.47
PRKDC-210ENST00000541488 SMN1Q16637 294 aaKnown RBP5.86□□□□□ -1.47
PRKDC-210ENST00000541488 CATSPEREQ5SY80 951 aa5.86□□□□□ -1.47
PRKDC-210ENST00000541488 RTKN2Q8IZC4 609 aa5.86□□□□□ -1.47
PRKDC-210ENST00000541488 DNERQ8NFT8 737 aa5.86□□□□□ -1.47
PRKDC-210ENST00000541488 DLG3Q92796 817 aa5.86□□□□□ -1.47
PRKDC-210ENST00000541488 OR14A2Q96R54 314 aa5.86□□□□□ -1.47
PRKDC-210ENST00000541488 OR10A5Q9H207 317 aa5.86□□□□□ -1.47
PRKDC-210ENST00000541488 PIF1Q9H611 641 aa5.86□□□□□ -1.47
PRKDC-210ENST00000541488 B3GALT1Q9Y5Z6 326 aa5.86□□□□□ -1.47
PRKDC-210ENST00000541488 DNAJC8O75937 253 aaPredicted RBP5.85□□□□□ -1.47
PRKDC-210ENST00000541488 ZBTB48P10074 688 aaPredicted RBP5.85□□□□□ -1.47
PRKDC-210ENST00000541488 SDSP20132 328 aa5.85□□□□□ -1.47
PRKDC-210ENST00000541488 IGFALSP35858 605 aa5.85□□□□□ -1.47
PRKDC-210ENST00000541488 PCOLCEQ15113 449 aa5.85□□□□□ -1.47
PRKDC-210ENST00000541488 ZMAT1Q5H9K5 638 aa5.85□□□□□ -1.47
PRKDC-210ENST00000541488 SPDYAQ5MJ70 313 aa5.85□□□□□ -1.47
PRKDC-210ENST00000541488 PIK3R6Q5UE93 754 aa5.85□□□□□ -1.47
PRKDC-210ENST00000541488 KANK2Q63ZY3 851 aa5.85□□□□□ -1.47
PRKDC-210ENST00000541488 ZCCHC8Q6NZY4 707 aaKnown RBP5.85□□□□□ -1.47
PRKDC-210ENST00000541488 DDX53Q86TM3 631 aaKnown RBP5.85□□□□□ -1.47
PRKDC-210ENST00000541488 FUKQ8N0W3 1084 aa5.85□□□□□ -1.47
PRKDC-210ENST00000541488 OR14K1Q8NGZ2 314 aa5.85□□□□□ -1.47
PRKDC-210ENST00000541488 BOCQ9BWV1 1114 aa5.85□□□□□ -1.47
PRKDC-210ENST00000541488 SEC61A2Q9H9S3 476 aa5.85□□□□□ -1.47
PRKDC-210ENST00000541488 A0A0G2JNJ9 132 aa5.84□□□□□ -1.47
PRKDC-210ENST00000541488 MUSKO15146 869 aa5.84□□□□□ -1.47
PRKDC-210ENST00000541488 KCNQ2O43526 872 aa5.84□□□□□ -1.47
PRKDC-210ENST00000541488 CR2P20023 1033 aa5.84□□□□□ -1.47
PRKDC-210ENST00000541488 MRE11P49959 708 aa5.84□□□□□ -1.47
PRKDC-210ENST00000541488 MEOX1P50221 254 aa5.84□□□□□ -1.47
PRKDC-210ENST00000541488 ACAP1Q15027 740 aa5.84□□□□□ -1.47
PRKDC-210ENST00000541488 STILQ15468 1287 aa5.84□□□□□ -1.47
PRKDC-210ENST00000541488 GRAMD4Q6IC98 578 aa5.84□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms