RNA–Protein interactions for RNA: ENST00000541342.2

SPIDR-227, Transcript of scaffold protein involved in DNA repair, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SPIDR, Length 3,311 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-227ENST00000541342 FAM184BQ9ULE4 1060 aa18.86■□□□□ 0.61
SPIDR-227ENST00000541342 CYP11B2P19099 503 aa18.86■□□□□ 0.61
SPIDR-227ENST00000541342 EIF4A3P38919 411 aaKnown RBP18.86■□□□□ 0.61
SPIDR-227ENST00000541342 COASYQ13057 564 aa18.86■□□□□ 0.61
SPIDR-227ENST00000541342 SPATA4Q8NEY3 305 aa18.86■□□□□ 0.61
SPIDR-227ENST00000541342 NDST4Q9H3R1 872 aa18.86■□□□□ 0.61
SPIDR-227ENST00000541342 RPTORQ8N122 1335 aa18.86■□□□□ 0.61
SPIDR-227ENST00000541342 PPFIA4O75335 1185 aa18.85■□□□□ 0.61
SPIDR-227ENST00000541342 ARP10275 920 aa18.85■□□□□ 0.61
SPIDR-227ENST00000541342 GHRHRQ02643 423 aa18.85■□□□□ 0.61
SPIDR-227ENST00000541342 GPBP1Q86WP2 473 aa18.85■□□□□ 0.61
SPIDR-227ENST00000541342 ERMNQ8TAM6 284 aa18.85■□□□□ 0.61
SPIDR-227ENST00000541342 CRACR2AQ9BSW2 395 aa18.85■□□□□ 0.61
SPIDR-227ENST00000541342 PPP2R3BQ9Y5P8 575 aa18.85■□□□□ 0.61
SPIDR-227ENST00000541342 CXCR5P32302 372 aa18.85■□□□□ 0.61
SPIDR-227ENST00000541342 HMGCS2P54868 508 aa18.85■□□□□ 0.61
SPIDR-227ENST00000541342 CACNB1Q02641 598 aaPredicted RBP18.85■□□□□ 0.61
SPIDR-227ENST00000541342 CYP4A11Q02928 519 aa18.85■□□□□ 0.61
SPIDR-227ENST00000541342 ITIH3Q06033 890 aa18.85■□□□□ 0.61
SPIDR-227ENST00000541342 SPA17Q15506 151 aa18.85■□□□□ 0.61
SPIDR-227ENST00000541342 IL31RAQ8NI17 732 aa18.85■□□□□ 0.61
SPIDR-227ENST00000541342 BAP1Q92560 729 aa18.85■□□□□ 0.61
SPIDR-227ENST00000541342 ATG4CQ96DT6 458 aa18.85■□□□□ 0.61
SPIDR-227ENST00000541342 OSBPL9Q96SU4 736 aa18.85■□□□□ 0.61
SPIDR-227ENST00000541342 EIF2AK1Q9BQI3 630 aaKnown RBP18.85■□□□□ 0.61
SPIDR-227ENST00000541342 FGFBP2Q9BYJ0 223 aa18.85■□□□□ 0.61
SPIDR-227ENST00000541342 EHMT1Q9H9B1 1298 aa18.85■□□□□ 0.61
SPIDR-227ENST00000541342 AS3MTQ9HBK9 375 aa18.85■□□□□ 0.61
SPIDR-227ENST00000541342 PPP1R2P41236 205 aa18.85■□□□□ 0.61
SPIDR-227ENST00000541342 FKBP15Q5T1M5 1219 aa18.85■□□□□ 0.61
SPIDR-227ENST00000541342 PSMB7Q99436 277 aa18.85■□□□□ 0.61
SPIDR-227ENST00000541342 PANK4Q9NVE7 773 aa18.85■□□□□ 0.61
SPIDR-227ENST00000541342 RGL1Q9NZL6 768 aa18.85■□□□□ 0.61
SPIDR-227ENST00000541342 WDR90Q96KV7 1748 aa18.85■□□□□ 0.61
SPIDR-227ENST00000541342 VWA5AO00534 786 aa18.84■□□□□ 0.61
SPIDR-227ENST00000541342 SLC7A5Q01650 507 aa18.84■□□□□ 0.61
SPIDR-227ENST00000541342 PRKG1Q13976 671 aa18.84■□□□□ 0.61
SPIDR-227ENST00000541342 LRRC41Q15345 812 aa18.84■□□□□ 0.61
SPIDR-227ENST00000541342 LRCH2Q5VUJ6 765 aa18.84■□□□□ 0.61
SPIDR-227ENST00000541342 GOLGA6BA6NDN3 693 aa18.84■□□□□ 0.61
SPIDR-227ENST00000541342 LRRC53A6NM62 1247 aa18.84■□□□□ 0.61
SPIDR-227ENST00000541342 PRLRP16471 622 aa18.84■□□□□ 0.61
SPIDR-227ENST00000541342 YBX3P16989 372 aaKnown RBP eCLIP18.84■□□□□ 0.61
SPIDR-227ENST00000541342 ASTE1Q2TB18 679 aaPredicted RBP18.84■□□□□ 0.61
SPIDR-227ENST00000541342 PCDHA2Q9Y5H9 948 aa18.84■□□□□ 0.61
SPIDR-227ENST00000541342 NCK2O43639 380 aa18.84■□□□□ 0.61
SPIDR-227ENST00000541342 ITGB5P18084 799 aa18.84■□□□□ 0.61
SPIDR-227ENST00000541342 ERCC3P19447 782 aa18.84■□□□□ 0.61
SPIDR-227ENST00000541342 CORO7P57737 925 aa18.84■□□□□ 0.61
SPIDR-227ENST00000541342 PSMD2Q13200 908 aa18.84■□□□□ 0.61
SPIDR-227ENST00000541342 PABPC4Q13310 644 aaKnown RBP eCLIP18.84■□□□□ 0.61
SPIDR-227ENST00000541342 PPP2R5CQ13362 524 aa18.84■□□□□ 0.61
SPIDR-227ENST00000541342 LRRC55Q6ZSA7 311 aa18.84■□□□□ 0.61
SPIDR-227ENST00000541342 GUF1Q8N442 669 aaKnown RBP18.84■□□□□ 0.61
SPIDR-227ENST00000541342 POLR3CQ9BUI4 534 aaPredicted RBP18.84■□□□□ 0.61
SPIDR-227ENST00000541342 RNF181Q9P0P0 153 aa18.84■□□□□ 0.61
SPIDR-227ENST00000541342 CCDC155Q8N6L0 562 aa18.83■□□□□ 0.61
SPIDR-227ENST00000541342 GOLGA6L1Q8N7Z2 621 aa18.83■□□□□ 0.61
SPIDR-227ENST00000541342 SYTL5Q8TDW5 730 aaPredicted RBP18.83■□□□□ 0.61
SPIDR-227ENST00000541342 C12orf42Q96LP6 360 aa18.83■□□□□ 0.61
SPIDR-227ENST00000541342 SYT17Q9BSW7 474 aa18.83■□□□□ 0.61
SPIDR-227ENST00000541342 CHMP2AO43633 222 aa18.83■□□□□ 0.6
SPIDR-227ENST00000541342 TACC1O75410 805 aa18.83■□□□□ 0.6
SPIDR-227ENST00000541342 SND1Q7KZF4 910 aaKnown RBP eCLIP18.83■□□□□ 0.6
SPIDR-227ENST00000541342 MCF2L2Q86YR7 1114 aa18.83■□□□□ 0.6
SPIDR-227ENST00000541342 SH3GL2Q99962 352 aa18.83■□□□□ 0.6
SPIDR-227ENST00000541342 HSD17B14Q9BPX1 270 aa18.83■□□□□ 0.6
SPIDR-227ENST00000541342 MXRA8Q9BRK3 442 aa18.83■□□□□ 0.6
SPIDR-227ENST00000541342 DNM3Q9UQ16 869 aa18.83■□□□□ 0.6
SPIDR-227ENST00000541342 RIPK3Q9Y572 518 aa18.83■□□□□ 0.6
SPIDR-227ENST00000541342 PAPPA2Q9BXP8 1791 aa18.83■□□□□ 0.6
SPIDR-227ENST00000541342 USP2O75604 605 aaPredicted RBP18.82■□□□□ 0.6
SPIDR-227ENST00000541342 IQCEQ6IPM2 695 aa18.82■□□□□ 0.6
SPIDR-227ENST00000541342 SYT2Q8N9I0 419 aaPredicted RBP18.82■□□□□ 0.6
SPIDR-227ENST00000541342 TSEN2Q8NCE0 465 aaKnown RBP18.82■□□□□ 0.6
SPIDR-227ENST00000541342 DDX55Q8NHQ9 600 aaKnown RBP eCLIP18.82■□□□□ 0.6
SPIDR-227ENST00000541342 ZNF577Q9BSK1 485 aa18.82■□□□□ 0.6
SPIDR-227ENST00000541342 TLR10Q9BXR5 811 aa18.82■□□□□ 0.6
SPIDR-227ENST00000541342 TBC1D7Q9P0N9 293 aa18.82■□□□□ 0.6
SPIDR-227ENST00000541342 OTOFQ9HC10 1997 aa18.82■□□□□ 0.6
SPIDR-227ENST00000541342 FRMD3A2A2Y4 597 aa18.82■□□□□ 0.6
SPIDR-227ENST00000541342 ZBED4O75132 1171 aa18.82■□□□□ 0.6
SPIDR-227ENST00000541342 HGSNATQ68CP4 663 aa18.82■□□□□ 0.6
SPIDR-227ENST00000541342 REPS2Q8NFH8 660 aa18.82■□□□□ 0.6
SPIDR-227ENST00000541342 BMP2KQ9NSY1 1161 aaPredicted RBP18.82■□□□□ 0.6
SPIDR-227ENST00000541342 STK24Q9Y6E0 443 aa18.82■□□□□ 0.6
SPIDR-227ENST00000541342 PITPNM2Q9BZ72 1349 aa18.82■□□□□ 0.6
SPIDR-227ENST00000541342 GOLGA6CA6NDK9 693 aa18.82■□□□□ 0.6
SPIDR-227ENST00000541342 GOLGA6DP0CG33 693 aa18.82■□□□□ 0.6
SPIDR-227ENST00000541342 MAGEA9P43362 315 aa18.82■□□□□ 0.6
SPIDR-227ENST00000541342 RPS6P62753 249 aaKnown RBP18.82■□□□□ 0.6
SPIDR-227ENST00000541342 SETQ01105 290 aaPredicted RBP18.82■□□□□ 0.6
SPIDR-227ENST00000541342 MAN2A1Q16706 1144 aa18.82■□□□□ 0.6
SPIDR-227ENST00000541342 NOL9Q5SY16 702 aaKnown RBP18.82■□□□□ 0.6
SPIDR-227ENST00000541342 RRAGAQ7L523 313 aa18.82■□□□□ 0.6
SPIDR-227ENST00000541342 ANKRD13CQ8N6S4 541 aa18.82■□□□□ 0.6
SPIDR-227ENST00000541342 MMRN2Q9H8L6 949 aa18.82■□□□□ 0.6
SPIDR-227ENST00000541342 GOLGA6AQ9NYA3 693 aa18.82■□□□□ 0.6
SPIDR-227ENST00000541342 USO1O60763 962 aaKnown RBP18.81■□□□□ 0.6
SPIDR-227ENST00000541342 GAS7O60861 476 aa18.81■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 66.3 ms