RNA–Protein interactions for RNA: ENST00000541304.5

CDKN3-206, Transcript of cyclin dependent kinase inhibitor 3, humanhuman

TSL 2 BASIC

Gene CDKN3, Length 1,070 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN3-206ENST00000541304 CCAR1Q8IX12 1150 aaKnown RBP6.53□□□□□ -1.36
CDKN3-206ENST00000541304 DNERQ8NFT8 737 aa6.53□□□□□ -1.36
CDKN3-206ENST00000541304 SOCS4Q8WXH5 440 aa6.53□□□□□ -1.36
CDKN3-206ENST00000541304 MYO19Q96H55 970 aa6.53□□□□□ -1.36
CDKN3-206ENST00000541304 ZNF396Q96N95 335 aaPredicted RBP6.53□□□□□ -1.36
CDKN3-206ENST00000541304 SCAND2PQ9GZW5 306 aaPredicted RBP6.53□□□□□ -1.36
CDKN3-206ENST00000541304 VAT1LQ9HCJ6 419 aa6.53□□□□□ -1.36
CDKN3-206ENST00000541304 RNF146Q9NTX7 359 aa6.53□□□□□ -1.36
CDKN3-206ENST00000541304 FBXO28Q9NVF7 368 aa6.53□□□□□ -1.36
CDKN3-206ENST00000541304 KLK14Q9P0G3 267 aa6.53□□□□□ -1.36
CDKN3-206ENST00000541304 VPS54Q9P1Q0 977 aa6.53□□□□□ -1.36
CDKN3-206ENST00000541304 ADD3Q9UEY8 706 aaKnown RBP6.53□□□□□ -1.36
CDKN3-206ENST00000541304 MTMR6Q9Y217 621 aa6.53□□□□□ -1.36
CDKN3-206ENST00000541304 IVNS1ABPQ9Y6Y0 642 aa6.53□□□□□ -1.36
CDKN3-206ENST00000541304 RBBP6Q7Z6E9 1792 aaKnown RBP6.53□□□□□ -1.36
CDKN3-206ENST00000541304 PARP14Q460N5 1801 aa6.53□□□□□ -1.36
CDKN3-206ENST00000541304 ZNF236Q9UL36 1845 aa6.53□□□□□ -1.36
CDKN3-206ENST00000541304 FRMPD4Q14CM0 1322 aa6.52□□□□□ -1.37
CDKN3-206ENST00000541304 ADGRA2Q96PE1 1338 aa6.52□□□□□ -1.37
CDKN3-206ENST00000541304 YEATS4O95619 227 aa6.52□□□□□ -1.37
CDKN3-206ENST00000541304 ALAS1P13196 640 aa6.52□□□□□ -1.37
CDKN3-206ENST00000541304 ELNP15502 786 aa6.52□□□□□ -1.37
CDKN3-206ENST00000541304 USP11P51784 963 aa6.52□□□□□ -1.37
CDKN3-206ENST00000541304 RAC1P63000 192 aa6.52□□□□□ -1.37
CDKN3-206ENST00000541304 KRT85P78386 507 aa6.52□□□□□ -1.37
CDKN3-206ENST00000541304 SETQ01105 290 aaPredicted RBP6.52□□□□□ -1.37
CDKN3-206ENST00000541304 MAP2K1Q02750 393 aaPredicted RBP6.52□□□□□ -1.37
CDKN3-206ENST00000541304 KCTD2Q14681 263 aa6.52□□□□□ -1.37
CDKN3-206ENST00000541304 TMEM132BQ14DG7 1078 aa6.52□□□□□ -1.37
CDKN3-206ENST00000541304 SLC35G1Q2M3R5 365 aa6.52□□□□□ -1.37
CDKN3-206ENST00000541304 USH1GQ495M9 461 aa6.52□□□□□ -1.37
CDKN3-206ENST00000541304 MCTP1Q6DN14 999 aa6.52□□□□□ -1.37
CDKN3-206ENST00000541304 PSAPL1Q6NUJ1 521 aa6.52□□□□□ -1.37
CDKN3-206ENST00000541304 CCDC174Q6PII3 467 aa6.52□□□□□ -1.37
CDKN3-206ENST00000541304 RNF207Q6ZRF8 634 aa6.52□□□□□ -1.37
CDKN3-206ENST00000541304 RASGRP2Q7LDG7 609 aa6.52□□□□□ -1.37
CDKN3-206ENST00000541304 NEK8Q86SG6 692 aa6.52□□□□□ -1.37
CDKN3-206ENST00000541304 CMTR1Q8N1G2 835 aaKnown RBP6.52□□□□□ -1.37
CDKN3-206ENST00000541304 FAM43AQ8N2R8 423 aa6.52□□□□□ -1.37
CDKN3-206ENST00000541304 MSL3Q8N5Y2 521 aaKnown RBP6.52□□□□□ -1.37
CDKN3-206ENST00000541304 JMYQ8N9B5 988 aa6.52□□□□□ -1.37
CDKN3-206ENST00000541304 FAM200AQ8TCP9 573 aa6.52□□□□□ -1.37
CDKN3-206ENST00000541304 NUDT8Q8WV74 236 aa6.52□□□□□ -1.37
CDKN3-206ENST00000541304 P2RX7Q99572 595 aaKnown RBP6.52□□□□□ -1.37
CDKN3-206ENST00000541304 DIS3Q9Y2L1 958 aaKnown RBP6.52□□□□□ -1.37
CDKN3-206ENST00000541304 A0A0A0MRY4 1105 aa6.51□□□□□ -1.37
CDKN3-206ENST00000541304 IGF2BP3O00425 579 aaKnown RBP eCLIP6.51□□□□□ -1.37
CDKN3-206ENST00000541304 PPP1R11O60927 126 aaPredicted RBP6.51□□□□□ -1.37
CDKN3-206ENST00000541304 MAP3K6O95382 1288 aa6.51□□□□□ -1.37
CDKN3-206ENST00000541304 FCER1AP12319 257 aa6.51□□□□□ -1.37
CDKN3-206ENST00000541304 GRNP28799 593 aaKnown RBP6.51□□□□□ -1.37
CDKN3-206ENST00000541304 SREBF1P36956 1147 aa6.51□□□□□ -1.37
CDKN3-206ENST00000541304 C1QTNF8P60827 252 aa6.51□□□□□ -1.37
CDKN3-206ENST00000541304 RESTQ13127 1097 aa6.51□□□□□ -1.37
CDKN3-206ENST00000541304 PLS1Q14651 629 aa6.51□□□□□ -1.37
CDKN3-206ENST00000541304 KIF22Q14807 665 aa6.51□□□□□ -1.37
CDKN3-206ENST00000541304 NPY5RQ15761 445 aa6.51□□□□□ -1.37
CDKN3-206ENST00000541304 GRIK4Q16099 956 aa6.51□□□□□ -1.37
CDKN3-206ENST00000541304 RSPO4Q2I0M5 234 aaPredicted RBP6.51□□□□□ -1.37
CDKN3-206ENST00000541304 PPP4R3AQ6IN85 833 aa6.51□□□□□ -1.37
CDKN3-206ENST00000541304 CYP4F22Q6NT55 531 aa6.51□□□□□ -1.37
CDKN3-206ENST00000541304 NIPA1Q7RTP0 329 aa6.51□□□□□ -1.37
CDKN3-206ENST00000541304 CPXCR1Q8N123 301 aa6.51□□□□□ -1.37
CDKN3-206ENST00000541304 ANKRD35Q8N283 1001 aa6.51□□□□□ -1.37
CDKN3-206ENST00000541304 KCNG4Q8TDN1 519 aa6.51□□□□□ -1.37
CDKN3-206ENST00000541304 NSUN6Q8TEA1 469 aaKnown RBP6.51□□□□□ -1.37
CDKN3-206ENST00000541304 COA7Q96BR5 231 aa6.51□□□□□ -1.37
CDKN3-206ENST00000541304 CDHR1Q96JP9 859 aa6.51□□□□□ -1.37
CDKN3-206ENST00000541304 IWS1Q96ST2 819 aa6.51□□□□□ -1.37
CDKN3-206ENST00000541304 PTPN18Q99952 460 aa6.51□□□□□ -1.37
CDKN3-206ENST00000541304 MOV10L1Q9BXT6 1211 aaKnown RBP6.51□□□□□ -1.37
CDKN3-206ENST00000541304 ANO3Q9BYT9 981 aa6.51□□□□□ -1.37
CDKN3-206ENST00000541304 RAB34Q9BZG1 259 aa6.51□□□□□ -1.37
CDKN3-206ENST00000541304 SEMA6BQ9H3T3 888 aa6.51□□□□□ -1.37
CDKN3-206ENST00000541304 RAVER2Q9HCJ3 691 aaKnown RBP6.51□□□□□ -1.37
CDKN3-206ENST00000541304 C11orf16Q9NQ32 467 aa6.51□□□□□ -1.37
CDKN3-206ENST00000541304 UTP3Q9NQZ2 479 aaKnown RBP eCLIP6.51□□□□□ -1.379e-13■■■■■ 192.3
CDKN3-206ENST00000541304 TPSG1Q9NRR2 321 aa6.51□□□□□ -1.37
CDKN3-206ENST00000541304 RBPJLQ9UBG7 517 aa6.51□□□□□ -1.37
CDKN3-206ENST00000541304 ELP1O95163 1332 aa6.5□□□□□ -1.37
CDKN3-206ENST00000541304 RLFQ13129 1914 aa6.5□□□□□ -1.37
CDKN3-206ENST00000541304 hCG_1642624A0A1W2PR95 340 aa6.5□□□□□ -1.37
CDKN3-206ENST00000541304 SLC15A5A6NIM6 579 aa6.5□□□□□ -1.37
CDKN3-206ENST00000541304 ASB14A6NK59 587 aa6.5□□□□□ -1.37
CDKN3-206ENST00000541304 BTBD18B2RXH4 712 aa6.5□□□□□ -1.37
CDKN3-206ENST00000541304 C9orf172C9J069 976 aa6.5□□□□□ -1.37
CDKN3-206ENST00000541304 MEIS2O14770 477 aa6.5□□□□□ -1.37
CDKN3-206ENST00000541304 TBX3O15119 743 aa6.5□□□□□ -1.37
CDKN3-206ENST00000541304 MAFGO15525 162 aa6.5□□□□□ -1.37
CDKN3-206ENST00000541304 RGS9O75916 674 aaPredicted RBP6.5□□□□□ -1.37
CDKN3-206ENST00000541304 CFBP00751 764 aa6.5□□□□□ -1.37
CDKN3-206ENST00000541304 CYP3A4P08684 503 aa6.5□□□□□ -1.37
CDKN3-206ENST00000541304 ERCC3P19447 782 aa6.5□□□□□ -1.37
CDKN3-206ENST00000541304 CIITAP33076 1130 aa6.5□□□□□ -1.37
CDKN3-206ENST00000541304 PRPHP41219 470 aa6.5□□□□□ -1.37
CDKN3-206ENST00000541304 NASPP49321 788 aaPredicted RBP6.5□□□□□ -1.37
CDKN3-206ENST00000541304 AFF1P51825 1210 aaKnown RBP6.5□□□□□ -1.37
CDKN3-206ENST00000541304 PRMT2P55345 433 aa6.5□□□□□ -1.37
CDKN3-206ENST00000541304 C11orf91Q3C1V1 193 aa6.5□□□□□ -1.37
CDKN3-206ENST00000541304 GNPTABQ3T906 1256 aa6.5□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms