RNA–Protein interactions for RNA: ENST00000541102.1

LTBR-209, Transcript of lymphotoxin beta receptor, humanhuman

TSL 5 BASIC

Gene LTBR, Length 1,084 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-209ENST00000541102 SYT1P21579 422 aa16.03■□□□□ 0.16
LTBR-209ENST00000541102 FBXO47Q5MNV8 452 aa16.03■□□□□ 0.16
LTBR-209ENST00000541102 BBXQ8WY36 941 aaPredicted RBP16.03■□□□□ 0.16
LTBR-209ENST00000541102 APBB2Q92870 758 aa16.03■□□□□ 0.16
LTBR-209ENST00000541102 TSHZ2Q9NRE2 1034 aa16.03■□□□□ 0.16
LTBR-209ENST00000541102 GINS2Q9Y248 185 aa16.03■□□□□ 0.16
LTBR-209ENST00000541102 TRPV2Q9Y5S1 764 aa16.03■□□□□ 0.16
LTBR-209ENST00000541102 PTPRSQ13332 1948 aa16.03■□□□□ 0.16
LTBR-209ENST00000541102 COL1A2P08123 1366 aa16.02■□□□□ 0.16
LTBR-209ENST00000541102 LOC101059915A0A1B0GWI6 518 aaPredicted RBP16.02■□□□□ 0.16
LTBR-209ENST00000541102 EPOPA6NHQ4 379 aa16.02■□□□□ 0.16
LTBR-209ENST00000541102 ZBTB42B2RXF5 422 aa16.02■□□□□ 0.16
LTBR-209ENST00000541102 PSMD10O75832 226 aa16.02■□□□□ 0.16
LTBR-209ENST00000541102 RPLP2P05387 115 aaKnown RBP16.02■□□□□ 0.16
LTBR-209ENST00000541102 U2AF2P26368 475 aaKnown RBP eCLIP16.02■□□□□ 0.161e-6■■■■■ 28.8
LTBR-209ENST00000541102 CD52P31358 61 aa16.02■□□□□ 0.16
LTBR-209ENST00000541102 SFNP31947 248 aa16.02■□□□□ 0.16
LTBR-209ENST00000541102 JAK3P52333 1124 aa16.02■□□□□ 0.16
LTBR-209ENST00000541102 MKRN4PQ13434 485 aaPredicted RBP16.02■□□□□ 0.16
LTBR-209ENST00000541102 MOXD1Q6UVY6 613 aa16.02■□□□□ 0.16
LTBR-209ENST00000541102 TSHZ1Q6ZSZ6 1077 aa16.02■□□□□ 0.16
LTBR-209ENST00000541102 MIER3Q7Z3K6 550 aa16.02■□□□□ 0.16
LTBR-209ENST00000541102 NEK8Q86SG6 692 aa16.02■□□□□ 0.16
LTBR-209ENST00000541102 PHF6Q8IWS0 365 aaKnown RBP eCLIP16.02■□□□□ 0.16
LTBR-209ENST00000541102 MICALL1Q8N3F8 863 aa16.02■□□□□ 0.16
LTBR-209ENST00000541102 NME8Q8N427 588 aa16.02■□□□□ 0.16
LTBR-209ENST00000541102 METTL13Q8N6R0 699 aa16.02■□□□□ 0.16
LTBR-209ENST00000541102 USP38Q8NB14 1042 aa16.02■□□□□ 0.16
LTBR-209ENST00000541102 MBOAT7Q96N66 472 aa16.02■□□□□ 0.16
LTBR-209ENST00000541102 CELF4Q9BZC1 486 aaKnown RBP16.02■□□□□ 0.16
LTBR-209ENST00000541102 AGO3Q9H9G7 860 aaKnown RBP16.02■□□□□ 0.16
LTBR-209ENST00000541102 BRMS1Q9HCU9 246 aa16.02■□□□□ 0.16
LTBR-209ENST00000541102 NRBP2Q9NSY0 501 aa16.02■□□□□ 0.16
LTBR-209ENST00000541102 MTUS1Q9ULD2 1270 aa16.02■□□□□ 0.16
LTBR-209ENST00000541102 COL6A3P12111 3177 aa16.02■□□□□ 0.15
LTBR-209ENST00000541102 MYH9P35579 1960 aaKnown RBP16.01■□□□□ 0.15
LTBR-209ENST00000541102 LINC01553A4QN01 128 aa16.01■□□□□ 0.15
LTBR-209ENST00000541102 ENPP3O14638 875 aa16.01■□□□□ 0.15
LTBR-209ENST00000541102 SLC37A4O43826 429 aa16.01■□□□□ 0.15
LTBR-209ENST00000541102 ZNF862O60290 1169 aa16.01■□□□□ 0.15
LTBR-209ENST00000541102 MARCH6O60337 910 aa16.01■□□□□ 0.15
LTBR-209ENST00000541102 CCNT1O60563 726 aaKnown RBP16.01■□□□□ 0.15
LTBR-209ENST00000541102 PKP1Q13835 747 aa16.01■□□□□ 0.15
LTBR-209ENST00000541102 NBR1Q14596 966 aa16.01■□□□□ 0.15
LTBR-209ENST00000541102 SAFBQ15424 915 aaKnown RBP eCLIP16.01■□□□□ 0.15
LTBR-209ENST00000541102 MCTP1Q6DN14 999 aa16.01■□□□□ 0.15
LTBR-209ENST00000541102 NOSTRINQ8IVI9 506 aa16.01■□□□□ 0.15
LTBR-209ENST00000541102 KIAA0319LQ8IZA0 1049 aa16.01■□□□□ 0.15
LTBR-209ENST00000541102 FAM167AQ96KS9 214 aa16.01■□□□□ 0.15
LTBR-209ENST00000541102 PPP1R16BQ96T49 567 aa16.01■□□□□ 0.15
LTBR-209ENST00000541102 FOXP1Q9H334 677 aaPredicted RBP16.01■□□□□ 0.15
LTBR-209ENST00000541102 KIF3AQ9Y496 699 aa16.01■□□□□ 0.15
LTBR-209ENST00000541102 INSL6Q9Y581 213 aa16.01■□□□□ 0.15
LTBR-209ENST00000541102 IGSF9BQ9UPX0 1349 aa16■□□□□ 0.15
LTBR-209ENST00000541102 VPS37CA5D8V6 355 aaPredicted RBP16■□□□□ 0.15
LTBR-209ENST00000541102 H3BQV1 296 aa16■□□□□ 0.15
LTBR-209ENST00000541102 C22orf31O95567 290 aa16■□□□□ 0.15
LTBR-209ENST00000541102 OATP04181 439 aa16■□□□□ 0.15
LTBR-209ENST00000541102 HSP90AA1P07900 732 aaKnown RBP16■□□□□ 0.15
LTBR-209ENST00000541102 TOB1P50616 345 aaPredicted RBP16■□□□□ 0.15
LTBR-209ENST00000541102 UGCGQ16739 394 aa16■□□□□ 0.15
LTBR-209ENST00000541102 TMEM266Q2M3C6 531 aa16■□□□□ 0.15
LTBR-209ENST00000541102 FERMT3Q86UX7 667 aa16■□□□□ 0.15
LTBR-209ENST00000541102 ETNPPLQ8TBG4 499 aa16■□□□□ 0.15
LTBR-209ENST00000541102 TOP1MTQ969P6 601 aa16■□□□□ 0.15
LTBR-209ENST00000541102 YME1L1Q96TA2 773 aa16■□□□□ 0.15
LTBR-209ENST00000541102 CDHR5Q9HBB8 845 aa16■□□□□ 0.15
LTBR-209ENST00000541102 PRDM6Q9NQX0 595 aa16■□□□□ 0.15
LTBR-209ENST00000541102 CEP131Q9UPN4 1083 aa16■□□□□ 0.15
LTBR-209ENST00000541102 MTMR6Q9Y217 621 aa16■□□□□ 0.15
LTBR-209ENST00000541102 MICAL3Q7RTP6 2002 aa16■□□□□ 0.15
LTBR-209ENST00000541102 CHD9Q3L8U1 2897 aa16■□□□□ 0.15
LTBR-209ENST00000541102 GTPBP6O43824 516 aaPredicted RBP15.99■□□□□ 0.15
LTBR-209ENST00000541102 ATP2B1P20020 1258 aa15.99■□□□□ 0.15
LTBR-209ENST00000541102 PRKCEQ02156 737 aa15.99■□□□□ 0.15
LTBR-209ENST00000541102 PAK2Q13177 524 aa15.99■□□□□ 0.15
LTBR-209ENST00000541102 PPP4R3AQ6IN85 833 aa15.99■□□□□ 0.15
LTBR-209ENST00000541102 RDM1Q8NG50 284 aa15.99■□□□□ 0.15
LTBR-209ENST00000541102 TGS1Q96RS0 853 aaKnown RBP15.99■□□□□ 0.15
LTBR-209ENST00000541102 SUGCTQ9HAC7 445 aa15.99■□□□□ 0.15
LTBR-209ENST00000541102 PADI3Q9ULW8 664 aa15.99■□□□□ 0.15
LTBR-209ENST00000541102 SQORQ9Y6N5 450 aa15.99■□□□□ 0.15
LTBR-209ENST00000541102 EVPLQ92817 2033 aa15.99■□□□□ 0.15
LTBR-209ENST00000541102 MAGEB2O15479 319 aa15.98■□□□□ 0.15
LTBR-209ENST00000541102 VTNP04004 478 aa15.98■□□□□ 0.15
LTBR-209ENST00000541102 GCFC2P16383 781 aaKnown RBP15.98■□□□□ 0.15
LTBR-209ENST00000541102 IBSPP21815 317 aaPredicted RBP15.98■□□□□ 0.15
LTBR-209ENST00000541102 CLCN3P51790 818 aa15.98■□□□□ 0.15
LTBR-209ENST00000541102 ERVK-21P61565 698 aa15.98■□□□□ 0.15
LTBR-209ENST00000541102 HTRA4P83105 476 aaPredicted RBP15.98■□□□□ 0.15
LTBR-209ENST00000541102 NFX1Q12986 1120 aaKnown RBP15.98■□□□□ 0.15
LTBR-209ENST00000541102 GRB10Q13322 594 aa15.98■□□□□ 0.15
LTBR-209ENST00000541102 KIZQ2M2Z5 673 aa15.98■□□□□ 0.15
LTBR-209ENST00000541102 FOXD4L5Q5VV16 416 aaPredicted RBP15.98■□□□□ 0.15
LTBR-209ENST00000541102 EFCAB12Q6NXP0 572 aa15.98■□□□□ 0.15
LTBR-209ENST00000541102 BANK1Q8NDB2 785 aa15.98■□□□□ 0.15
LTBR-209ENST00000541102 FOXD4L4Q8WXT5 416 aaPredicted RBP15.98■□□□□ 0.15
LTBR-209ENST00000541102 FAM20AQ96MK3 541 aa15.98■□□□□ 0.15
LTBR-209ENST00000541102 NAP1L4Q99733 375 aaKnown RBP15.98■□□□□ 0.15
LTBR-209ENST00000541102 C17orf80Q9BSJ5 609 aa15.98■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms