RNA–Protein interactions for RNA: ENST00000540683.1

CDCA3-208, Transcript of cell division cycle associated 3, humanhuman

TSL 2 BASIC

Gene CDCA3, Length 985 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3-208ENST00000540683 DISC1Q9NRI5 854 aa11.73□□□□□ -0.53
CDCA3-208ENST00000540683 C1orf112Q9NSG2 853 aa11.73□□□□□ -0.53
CDCA3-208ENST00000540683 LRFN2Q9ULH4 789 aa11.73□□□□□ -0.53
CDCA3-208ENST00000540683 IGSF9BQ9UPX0 1349 aa11.73□□□□□ -0.53
CDCA3-208ENST00000540683 PPME1Q9Y570 386 aa11.73□□□□□ -0.53
CDCA3-208ENST00000540683 MTCH2Q9Y6C9 303 aa11.73□□□□□ -0.53
CDCA3-208ENST00000540683 FSD2A1L4K1 749 aa11.72□□□□□ -0.53
CDCA3-208ENST00000540683 LINC01553A4QN01 128 aa11.72□□□□□ -0.53
CDCA3-208ENST00000540683 DHX15O43143 795 aaKnown RBP11.72□□□□□ -0.53
CDCA3-208ENST00000540683 PFKFB2O60825 505 aa11.72□□□□□ -0.53
CDCA3-208ENST00000540683 BAG4O95429 457 aaKnown RBP11.72□□□□□ -0.53
CDCA3-208ENST00000540683 MGAT3Q09327 533 aa11.72□□□□□ -0.53
CDCA3-208ENST00000540683 ADGRE1Q14246 886 aa11.72□□□□□ -0.53
CDCA3-208ENST00000540683 CCDC85BQ15834 202 aaPredicted RBP11.72□□□□□ -0.53
CDCA3-208ENST00000540683 MARCH8Q5T0T0 291 aa11.72□□□□□ -0.53
CDCA3-208ENST00000540683 RUFY4Q6ZNE9 571 aa11.72□□□□□ -0.53
CDCA3-208ENST00000540683 NPAS4Q8IUM7 802 aa11.72□□□□□ -0.53
CDCA3-208ENST00000540683 TBCKQ8TEA7 893 aa11.72□□□□□ -0.53
CDCA3-208ENST00000540683 HLA-CQ95604 372 aa11.72□□□□□ -0.53
CDCA3-208ENST00000540683 PCYT2Q99447 389 aa11.72□□□□□ -0.53
CDCA3-208ENST00000540683 PLVAPQ9BX97 442 aa11.72□□□□□ -0.53
CDCA3-208ENST00000540683 AAASQ9NRG9 546 aa11.72□□□□□ -0.53
CDCA3-208ENST00000540683 FAM50BQ9Y247 325 aa11.72□□□□□ -0.53
CDCA3-208ENST00000540683 CHD7Q9P2D1 2997 aa11.72□□□□□ -0.53
CDCA3-208ENST00000540683 DENND3A2RUS2 1198 aa11.71□□□□□ -0.53
CDCA3-208ENST00000540683 TBX3O15119 743 aa11.71□□□□□ -0.53
CDCA3-208ENST00000540683 HOXA2O43364 376 aa11.71□□□□□ -0.53
CDCA3-208ENST00000540683 RPS6KA5O75582 802 aa11.71□□□□□ -0.53
CDCA3-208ENST00000540683 UPP2O95045 317 aa11.71□□□□□ -0.53
CDCA3-208ENST00000540683 CCNE2O96020 404 aa11.71□□□□□ -0.53
CDCA3-208ENST00000540683 CRYBB1P53674 252 aaPredicted RBP11.71□□□□□ -0.53
CDCA3-208ENST00000540683 STK3Q13188 491 aa11.71□□□□□ -0.53
CDCA3-208ENST00000540683 GRB10Q13322 594 aa11.71□□□□□ -0.53
CDCA3-208ENST00000540683 CSPP1Q1MSJ5 1256 aa11.71□□□□□ -0.53
CDCA3-208ENST00000540683 PUS10Q3MIT2 529 aaKnown RBP11.71□□□□□ -0.53
CDCA3-208ENST00000540683 FAM117BQ6P1L5 589 aa11.71□□□□□ -0.53
CDCA3-208ENST00000540683 LIN28BQ6ZN17 250 aaKnown RBP eCLIP11.71□□□□□ -0.53
CDCA3-208ENST00000540683 MIER3Q7Z3K6 550 aa11.71□□□□□ -0.53
CDCA3-208ENST00000540683 CCDC60Q8IWA6 550 aaPredicted RBP11.71□□□□□ -0.53
CDCA3-208ENST00000540683 METTL13Q8N6R0 699 aa11.71□□□□□ -0.53
CDCA3-208ENST00000540683 SLC5A5Q92911 643 aa11.71□□□□□ -0.53
CDCA3-208ENST00000540683 CERS4Q9HA82 394 aa11.71□□□□□ -0.53
CDCA3-208ENST00000540683 GABBR1Q9UBS5 961 aa11.71□□□□□ -0.53
CDCA3-208ENST00000540683 DDX25Q9UHL0 483 aaKnown RBP11.71□□□□□ -0.53
CDCA3-208ENST00000540683 PRUNE2Q8WUY3 3088 aa11.71□□□□□ -0.53
CDCA3-208ENST00000540683 SIP14410 1827 aa11.71□□□□□ -0.54
CDCA3-208ENST00000540683 RALGAPA2Q2PPJ7 1873 aa11.7□□□□□ -0.54
CDCA3-208ENST00000540683 EYSQ5T1H1 3165 aa11.7□□□□□ -0.54
CDCA3-208ENST00000540683 ADGRA3Q8IWK6 1321 aa11.7□□□□□ -0.54
CDCA3-208ENST00000540683 H3BNC9 293 aa11.7□□□□□ -0.54
CDCA3-208ENST00000540683 ENPP3O14638 875 aa11.7□□□□□ -0.54
CDCA3-208ENST00000540683 MSH4O15457 936 aa11.7□□□□□ -0.54
CDCA3-208ENST00000540683 OATP04181 439 aa11.7□□□□□ -0.54
CDCA3-208ENST00000540683 ZSCAN20P17040 1043 aaPredicted RBP11.7□□□□□ -0.54
CDCA3-208ENST00000540683 TBC1D8BQ0IIM8 1120 aa11.7□□□□□ -0.54
CDCA3-208ENST00000540683 BTG3Q14201 252 aaPredicted RBP11.7□□□□□ -0.54
CDCA3-208ENST00000540683 SAFBQ15424 915 aaKnown RBP eCLIP11.7□□□□□ -0.54
CDCA3-208ENST00000540683 EPC2Q52LR7 807 aa11.7□□□□□ -0.54
CDCA3-208ENST00000540683 XKR3Q5GH77 459 aa11.7□□□□□ -0.54
CDCA3-208ENST00000540683 PPP4R3AQ6IN85 833 aa11.7□□□□□ -0.54
CDCA3-208ENST00000540683 NEK8Q86SG6 692 aa11.7□□□□□ -0.54
CDCA3-208ENST00000540683 TMEM192Q8IY95 271 aa11.7□□□□□ -0.54
CDCA3-208ENST00000540683 SLFN12Q8IYM2 578 aa11.7□□□□□ -0.54
CDCA3-208ENST00000540683 CMTR2Q8IYT2 770 aaKnown RBP11.7□□□□□ -0.54
CDCA3-208ENST00000540683 MRPL38Q96DV4 380 aaKnown RBP11.7□□□□□ -0.54
CDCA3-208ENST00000540683 PHF20Q9BVI0 1012 aa11.7□□□□□ -0.54
CDCA3-208ENST00000540683 COL25A1Q9BXS0 654 aaPredicted RBP11.7□□□□□ -0.54
CDCA3-208ENST00000540683 INO80BQ9C086 356 aaPredicted RBP11.7□□□□□ -0.54
CDCA3-208ENST00000540683 ORC3Q9UBD5 711 aaPredicted RBP11.7□□□□□ -0.54
CDCA3-208ENST00000540683 DAXXQ9UER7 740 aaPredicted RBP11.7□□□□□ -0.54
CDCA3-208ENST00000540683 PADI3Q9ULW8 664 aa11.7□□□□□ -0.54
CDCA3-208ENST00000540683 PCDHB7Q9Y5E2 793 aa11.7□□□□□ -0.54
CDCA3-208ENST00000540683 LOC101059915A0A1B0GWI6 518 aaPredicted RBP11.69□□□□□ -0.54
CDCA3-208ENST00000540683 LCHNA4D1U4 455 aa11.69□□□□□ -0.54
CDCA3-208ENST00000540683 KRT2P35908 639 aa11.69□□□□□ -0.54
CDCA3-208ENST00000540683 SCRN1Q12765 414 aa11.69□□□□□ -0.54
CDCA3-208ENST00000540683 NFX1Q12986 1120 aaKnown RBP11.69□□□□□ -0.54
CDCA3-208ENST00000540683 RASGRP4Q8TDF6 673 aa11.69□□□□□ -0.54
CDCA3-208ENST00000540683 LENG9Q96B70 501 aa11.69□□□□□ -0.54
CDCA3-208ENST00000540683 SCLT1Q96NL6 688 aa11.69□□□□□ -0.54
CDCA3-208ENST00000540683 SUGCTQ9HAC7 445 aa11.69□□□□□ -0.54
CDCA3-208ENST00000540683 UPF2Q9HAU5 1272 aaKnown RBP11.69□□□□□ -0.54
CDCA3-208ENST00000540683 MTUS1Q9ULD2 1270 aa11.69□□□□□ -0.54
CDCA3-208ENST00000540683 AKT3Q9Y243 479 aa11.69□□□□□ -0.54
CDCA3-208ENST00000540683 KIF3AQ9Y496 699 aa11.69□□□□□ -0.54
CDCA3-208ENST00000540683 PTPRSQ13332 1948 aa11.68□□□□□ -0.54
CDCA3-208ENST00000540683 C5orf67F2Z3F1 127 aa11.68□□□□□ -0.54
CDCA3-208ENST00000540683 TNFRSF10AO00220 468 aa11.68□□□□□ -0.54
CDCA3-208ENST00000540683 GAS2O43903 313 aaKnown RBP11.68□□□□□ -0.54
CDCA3-208ENST00000540683 PSMD10O75832 226 aa11.68□□□□□ -0.54
CDCA3-208ENST00000540683 DGKIO75912 1065 aa11.68□□□□□ -0.54
CDCA3-208ENST00000540683 C22orf31O95567 290 aa11.68□□□□□ -0.54
CDCA3-208ENST00000540683 SKIP12755 728 aa11.68□□□□□ -0.54
CDCA3-208ENST00000540683 CD52P31358 61 aa11.68□□□□□ -0.54
CDCA3-208ENST00000540683 CTNNB1P35222 781 aa11.68□□□□□ -0.54
CDCA3-208ENST00000540683 SARSP49591 514 aaKnown RBP11.68□□□□□ -0.54
CDCA3-208ENST00000540683 NEK4P51957 841 aa11.68□□□□□ -0.54
CDCA3-208ENST00000540683 PSMC5P62195 406 aa11.68□□□□□ -0.54
CDCA3-208ENST00000540683 PRKCEQ02156 737 aa11.68□□□□□ -0.54
CDCA3-208ENST00000540683 GPM6BQ13491 265 aa11.68□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms