RNA–Protein interactions for RNA: ENST00000540581.5

CACFD1-206, Transcript of calcium channel flower domain containing 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene CACFD1, Length 2,880 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACFD1-206ENST00000540581 SHMT1P34896 483 aa17.35■□□□□ 0.37
CACFD1-206ENST00000540581 HSPA9P38646 679 aaKnown RBP17.35■□□□□ 0.37
CACFD1-206ENST00000540581 MAGOHP61326 146 aaKnown RBP17.35■□□□□ 0.37
CACFD1-206ENST00000540581 MAEAQ7L5Y9 396 aa17.35■□□□□ 0.37
CACFD1-206ENST00000540581 MAGOHBQ96A72 148 aaKnown RBP17.35■□□□□ 0.37
CACFD1-206ENST00000540581 PHF20L1A8MW92 1017 aa17.35■□□□□ 0.37
CACFD1-206ENST00000540581 HMGB1P1B2RPK0 211 aaPredicted RBP17.35■□□□□ 0.37
CACFD1-206ENST00000540581 FLOT1O75955 427 aa17.35■□□□□ 0.37
CACFD1-206ENST00000540581 TRIM49P0CI25 452 aa17.35■□□□□ 0.37
CACFD1-206ENST00000540581 TRIM49CP0CI26 452 aa17.35■□□□□ 0.37
CACFD1-206ENST00000540581 ZNF76P36508 570 aa17.35■□□□□ 0.37
CACFD1-206ENST00000540581 RBM5P52756 815 aaKnown RBP eCLIP17.35■□□□□ 0.37
CACFD1-206ENST00000540581 GALCP54803 685 aa17.35■□□□□ 0.37
CACFD1-206ENST00000540581 ARHGAP4P98171 946 aa17.35■□□□□ 0.37
CACFD1-206ENST00000540581 CERS5Q8N5B7 392 aa17.35■□□□□ 0.37
CACFD1-206ENST00000540581 BUD13Q9BRD0 619 aaKnown RBP eCLIP17.35■□□□□ 0.37
CACFD1-206ENST00000540581 CD248Q9HCU0 757 aa17.35■□□□□ 0.37
CACFD1-206ENST00000540581 hCG_1984214I3L0E3 225 aa17.34■□□□□ 0.37
CACFD1-206ENST00000540581 TBCAO75347 108 aaKnown RBP17.34■□□□□ 0.37
CACFD1-206ENST00000540581 GDF11O95390 407 aa17.34■□□□□ 0.37
CACFD1-206ENST00000540581 SNHG28P0DPA3 235 aa17.34■□□□□ 0.37
CACFD1-206ENST00000540581 ATP2B4P23634 1241 aa17.34■□□□□ 0.37
CACFD1-206ENST00000540581 GUCY2CP25092 1073 aa17.34■□□□□ 0.37
CACFD1-206ENST00000540581 CYP2J2P51589 502 aa17.34■□□□□ 0.37
CACFD1-206ENST00000540581 SPRED3Q2MJR0 410 aa17.34■□□□□ 0.37
CACFD1-206ENST00000540581 TBC1D10BQ4KMP7 808 aaPredicted RBP17.34■□□□□ 0.37
CACFD1-206ENST00000540581 SLF2Q8IX21 1173 aa17.34■□□□□ 0.37
CACFD1-206ENST00000540581 SPICE1Q8N0Z3 855 aa17.34■□□□□ 0.37
CACFD1-206ENST00000540581 ZNF713Q8N859 430 aaPredicted RBP17.34■□□□□ 0.37
CACFD1-206ENST00000540581 LRRC57Q8N9N7 239 aa17.34■□□□□ 0.37
CACFD1-206ENST00000540581 SCFD2Q8WU76 684 aa17.34■□□□□ 0.37
CACFD1-206ENST00000540581 GLG1Q92896 1179 aa17.34■□□□□ 0.37
CACFD1-206ENST00000540581 TNRC6CQ9HCJ0 1690 aaKnown RBP17.34■□□□□ 0.37
CACFD1-206ENST00000540581 FAM86B1E9PN63 330 aa17.34■□□□□ 0.37
CACFD1-206ENST00000540581 G3V3G9 751 aa17.34■□□□□ 0.37
CACFD1-206ENST00000540581 FAM86B2P0C5J1 330 aa17.34■□□□□ 0.37
CACFD1-206ENST00000540581 EEF2P13639 858 aaKnown RBP17.34■□□□□ 0.37
CACFD1-206ENST00000540581 GABPAQ06546 454 aa17.34■□□□□ 0.37
CACFD1-206ENST00000540581 DCAF8Q5TAQ9 597 aa17.34■□□□□ 0.37
CACFD1-206ENST00000540581 CYFIP2Q96F07 1278 aa17.34■□□□□ 0.37
CACFD1-206ENST00000540581 TMOD4Q9NZQ9 345 aa17.34■□□□□ 0.37
CACFD1-206ENST00000540581 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP17.34■□□□□ 0.37
CACFD1-206ENST00000540581 BUB1BO60566 1050 aaPredicted RBP17.34■□□□□ 0.37
CACFD1-206ENST00000540581 IL1R1P14778 569 aa17.34■□□□□ 0.37
CACFD1-206ENST00000540581 SEPT2Q15019 361 aa17.34■□□□□ 0.37
CACFD1-206ENST00000540581 MCTP2Q6DN12 878 aa17.34■□□□□ 0.37
CACFD1-206ENST00000540581 TPH2Q8IWU9 490 aa17.34■□□□□ 0.37
CACFD1-206ENST00000540581 JPH2Q9BR39 696 aaPredicted RBP17.34■□□□□ 0.37
CACFD1-206ENST00000540581 PPP1R9AQ9ULJ8 1098 aa17.34■□□□□ 0.37
CACFD1-206ENST00000540581 IGSF9BQ9UPX0 1349 aa17.33■□□□□ 0.37
CACFD1-206ENST00000540581 MYH7BA7E2Y1 1941 aa17.33■□□□□ 0.37
CACFD1-206ENST00000540581 EVI5O60447 810 aa17.33■□□□□ 0.36
CACFD1-206ENST00000540581 SPATA31C1P0DKV0 1188 aa17.33■□□□□ 0.36
CACFD1-206ENST00000540581 SLFN13Q68D06 897 aa17.33■□□□□ 0.36
CACFD1-206ENST00000540581 MREGQ8N565 214 aa17.33■□□□□ 0.36
CACFD1-206ENST00000540581 MYCT1Q8N699 235 aa17.33■□□□□ 0.36
CACFD1-206ENST00000540581 PBKQ96KB5 322 aa17.33■□□□□ 0.36
CACFD1-206ENST00000540581 TAS2R14Q9NYV8 317 aa17.33■□□□□ 0.36
CACFD1-206ENST00000540581 TMEM59LQ9UK28 342 aa17.33■□□□□ 0.36
CACFD1-206ENST00000540581 MYH4Q9Y623 1939 aa17.33■□□□□ 0.36
CACFD1-206ENST00000540581 GOLGA6L7A0A1B0GV03 622 aa17.33■□□□□ 0.36
CACFD1-206ENST00000540581 KRT13P13646 458 aa17.33■□□□□ 0.36
CACFD1-206ENST00000540581 GCFC2P16383 781 aaKnown RBP17.33■□□□□ 0.36
CACFD1-206ENST00000540581 EPHA7Q15375 998 aa17.33■□□□□ 0.36
CACFD1-206ENST00000540581 VPS36Q86VN1 386 aa17.33■□□□□ 0.36
CACFD1-206ENST00000540581 PALB2Q86YC2 1186 aa17.33■□□□□ 0.36
CACFD1-206ENST00000540581 LNX1Q8TBB1 728 aaPredicted RBP17.33■□□□□ 0.36
CACFD1-206ENST00000540581 SLC35C1Q96A29 364 aa17.33■□□□□ 0.36
CACFD1-206ENST00000540581 LRRC45Q96CN5 670 aa17.33■□□□□ 0.36
CACFD1-206ENST00000540581 PLCB1Q9NQ66 1216 aa17.33■□□□□ 0.36
CACFD1-206ENST00000540581 KCNQ5Q9NR82 932 aa17.33■□□□□ 0.36
CACFD1-206ENST00000540581 EML1O00423 815 aa17.32■□□□□ 0.36
CACFD1-206ENST00000540581 CALUO43852 315 aaPredicted RBP17.32■□□□□ 0.36
CACFD1-206ENST00000540581 SERPINB2P05120 415 aa17.32■□□□□ 0.36
CACFD1-206ENST00000540581 BARGINQ6ZT62 677 aa17.32■□□□□ 0.36
CACFD1-206ENST00000540581 SLC35G2Q8TBE7 412 aa17.32■□□□□ 0.36
CACFD1-206ENST00000540581 SELENOSQ9BQE4 189 aa17.32■□□□□ 0.36
CACFD1-206ENST00000540581 KCNMB3Q9NPA1 279 aa17.32■□□□□ 0.36
CACFD1-206ENST00000540581 ATF5Q9Y2D1 282 aaPredicted RBP17.32■□□□□ 0.36
CACFD1-206ENST00000540581 ASTN1O14525 1302 aa17.32■□□□□ 0.36
CACFD1-206ENST00000540581 MAST2Q6P0Q8 1798 aa17.32■□□□□ 0.36
CACFD1-206ENST00000540581 ACTN3Q08043 901 aaPredicted RBP17.32■□□□□ 0.36
CACFD1-206ENST00000540581 IFI16Q16666 785 aaKnown RBP17.32■□□□□ 0.36
CACFD1-206ENST00000540581 EDRF1Q3B7T1 1238 aa17.32■□□□□ 0.36
CACFD1-206ENST00000540581 UBAP2Q5T6F2 1119 aaKnown RBP17.32■□□□□ 0.36
CACFD1-206ENST00000540581 DPY19L2P1Q6NXN4 242 aa17.32■□□□□ 0.36
CACFD1-206ENST00000540581 MICALCLQ6ZW33 695 aa17.32■□□□□ 0.36
CACFD1-206ENST00000540581 CCDC114Q96M63 670 aa17.32■□□□□ 0.36
CACFD1-206ENST00000540581 SIX2Q9NPC8 291 aa17.32■□□□□ 0.36
CACFD1-206ENST00000540581 ZNF219Q9P2Y4 722 aaPredicted RBP17.32■□□□□ 0.36
CACFD1-206ENST00000540581 SNX24Q9Y343 169 aa17.32■□□□□ 0.36
CACFD1-206ENST00000540581 SPDYE3A6NKU9 549 aa17.31■□□□□ 0.36
CACFD1-206ENST00000540581 H0YGN5 161 aa17.31■□□□□ 0.36
CACFD1-206ENST00000540581 MEIS2O14770 477 aa17.31■□□□□ 0.36
CACFD1-206ENST00000540581 FAM107AO95990 144 aa17.31■□□□□ 0.36
CACFD1-206ENST00000540581 USP8P40818 1118 aa17.31■□□□□ 0.36
CACFD1-206ENST00000540581 MARSP56192 900 aaKnown RBP17.31■□□□□ 0.36
CACFD1-206ENST00000540581 GPATCH4Q5T3I0 446 aaKnown RBP17.31■□□□□ 0.36
CACFD1-206ENST00000540581 CDC42EP5Q6NZY7 148 aa17.31■□□□□ 0.36
CACFD1-206ENST00000540581 CABS1Q96KC9 395 aa17.31■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms