RNA–Protein interactions for RNA: ENST00000540236.3

PBX1-212, Transcript of PBX homeobox 1, humanhuman

TSL 1 (best) BASIC

Gene PBX1, Length 6,175 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBX1-212ENST00000540236 PPP1R36Q96LQ0 422 aa11.92□□□□□ -0.5
PBX1-212ENST00000540236 GSDMAQ96QA5 445 aa11.92□□□□□ -0.5
PBX1-212ENST00000540236 SCINQ9Y6U3 715 aa11.92□□□□□ -0.5
PBX1-212ENST00000540236 PPP1R3GB7ZBB8 358 aa11.91□□□□□ -0.5
PBX1-212ENST00000540236 AP2B1P63010 937 aa11.91□□□□□ -0.5
PBX1-212ENST00000540236 AGBL2Q5U5Z8 902 aa11.91□□□□□ -0.5
PBX1-212ENST00000540236 PHC3Q8NDX5 983 aa11.91□□□□□ -0.5
PBX1-212ENST00000540236 PPP1R14BQ96C90 147 aa11.91□□□□□ -0.5
PBX1-212ENST00000540236 EYA1Q99502 592 aa11.91□□□□□ -0.5
PBX1-212ENST00000540236 THTPAQ9BU02 230 aa11.91□□□□□ -0.5
PBX1-212ENST00000540236 GRIP2Q9C0E4 1043 aa11.91□□□□□ -0.5
PBX1-212ENST00000540236 NMRK1Q9NWW6 199 aa11.91□□□□□ -0.5
PBX1-212ENST00000540236 BLOC1S6Q9UL45 172 aa11.91□□□□□ -0.5
PBX1-212ENST00000540236 ARHGAP26Q9UNA1 814 aa11.91□□□□□ -0.5
PBX1-212ENST00000540236 SRPRBQ9Y5M8 271 aaKnown RBP11.91□□□□□ -0.5
PBX1-212ENST00000540236 MEI4A8MW99 385 aa11.91□□□□□ -0.5
PBX1-212ENST00000540236 DCTN3O75935 186 aa11.91□□□□□ -0.5
PBX1-212ENST00000540236 GFPT2O94808 682 aa11.91□□□□□ -0.5
PBX1-212ENST00000540236 VWA3BQ502W6 1294 aa11.91□□□□□ -0.5
PBX1-212ENST00000540236 CNNM4Q6P4Q7 775 aa11.91□□□□□ -0.5
PBX1-212ENST00000540236 STK32AQ8WU08 396 aa11.91□□□□□ -0.5
PBX1-212ENST00000540236 PLEKHG4BQ96PX9 1271 aa11.91□□□□□ -0.5
PBX1-212ENST00000540236 TMEM60Q9H2L4 133 aa11.91□□□□□ -0.5
PBX1-212ENST00000540236 CYP39A1Q9NYL5 469 aa11.91□□□□□ -0.5
PBX1-212ENST00000540236 PPARGC1AQ9UBK2 798 aaKnown RBP11.91□□□□□ -0.5
PBX1-212ENST00000540236 DLATP10515 647 aaKnown RBP11.91□□□□□ -0.5
PBX1-212ENST00000540236 MARK3P27448 753 aa11.91□□□□□ -0.5
PBX1-212ENST00000540236 SYCP2LQ5T4T6 812 aa11.91□□□□□ -0.5
PBX1-212ENST00000540236 CAVIN3Q969G5 261 aa11.91□□□□□ -0.5
PBX1-212ENST00000540236 TTC17Q96AE7 1141 aa11.91□□□□□ -0.5
PBX1-212ENST00000540236 SH3GL2Q99962 352 aa11.91□□□□□ -0.5
PBX1-212ENST00000540236 PDP2Q9P2J9 529 aa11.91□□□□□ -0.5
PBX1-212ENST00000540236 MAP3K5Q99683 1374 aa11.91□□□□□ -0.5
PBX1-212ENST00000540236 RARAP10276 462 aa11.91□□□□□ -0.5
PBX1-212ENST00000540236 ADORA1P30542 326 aa11.91□□□□□ -0.5
PBX1-212ENST00000540236 PSMD7P51665 324 aa11.91□□□□□ -0.5
PBX1-212ENST00000540236 POLA2Q14181 598 aa11.91□□□□□ -0.5
PBX1-212ENST00000540236 CRACR2BQ8N4Y2 399 aaPredicted RBP11.91□□□□□ -0.5
PBX1-212ENST00000540236 P2RX5Q93086 422 aa11.91□□□□□ -0.5
PBX1-212ENST00000540236 OSBP2Q969R2 916 aa11.91□□□□□ -0.5
PBX1-212ENST00000540236 LRRC59Q96AG4 307 aaKnown RBP11.91□□□□□ -0.5
PBX1-212ENST00000540236 DCUN1D5Q9BTE7 237 aa11.91□□□□□ -0.5
PBX1-212ENST00000540236 ZBED2Q9BTP6 218 aa11.91□□□□□ -0.5
PBX1-212ENST00000540236 FRMD4AQ9P2Q2 1039 aaPredicted RBP11.91□□□□□ -0.5
PBX1-212ENST00000540236 FBXO2Q9UK22 296 aaPredicted RBP11.91□□□□□ -0.5
PBX1-212ENST00000540236 LRRC7Q96NW7 1537 aa11.91□□□□□ -0.5
PBX1-212ENST00000540236 I3L4J1 428 aa11.91□□□□□ -0.5
PBX1-212ENST00000540236 TMEM266Q2M3C6 531 aa11.91□□□□□ -0.5
PBX1-212ENST00000540236 LRRC24Q50LG9 513 aa11.91□□□□□ -0.5
PBX1-212ENST00000540236 CDCA2Q69YH5 1023 aaPredicted RBP11.91□□□□□ -0.5
PBX1-212ENST00000540236 TRIM67Q6ZTA4 783 aa11.91□□□□□ -0.5
PBX1-212ENST00000540236 ICA1LQ8NDH6 482 aa11.91□□□□□ -0.5
PBX1-212ENST00000540236 CCDC110Q8TBZ0 833 aa11.91□□□□□ -0.5
PBX1-212ENST00000540236 SYT15Q9BQS2 421 aa11.91□□□□□ -0.5
PBX1-212ENST00000540236 CENPOQ9BU64 300 aa11.91□□□□□ -0.5
PBX1-212ENST00000540236 TRAIPQ9BWF2 469 aa11.91□□□□□ -0.5
PBX1-212ENST00000540236 PCP4L1A6NKN8 68 aa11.9□□□□□ -0.5
PBX1-212ENST00000540236 CA4P22748 312 aa11.9□□□□□ -0.5
PBX1-212ENST00000540236 PIK3CAP42336 1068 aa11.9□□□□□ -0.5
PBX1-212ENST00000540236 ANO7Q6IWH7 933 aa11.9□□□□□ -0.5
PBX1-212ENST00000540236 LRRC74BQ6ZQY2 392 aa11.9□□□□□ -0.5
PBX1-212ENST00000540236 PAF1Q8N7H5 531 aa11.9□□□□□ -0.5
PBX1-212ENST00000540236 SLAIN2Q9P270 581 aa11.9□□□□□ -0.5
PBX1-212ENST00000540236 DSEQ9UL01 958 aa11.9□□□□□ -0.5
PBX1-212ENST00000540236 H3BRJ5 948 aa11.9□□□□□ -0.5
PBX1-212ENST00000540236 BOLA2-SMG1P6H3BVE0 249 aa11.9□□□□□ -0.5
PBX1-212ENST00000540236 APOEP02649 317 aa11.9□□□□□ -0.5
PBX1-212ENST00000540236 EXOC3L4Q17RC7 722 aa11.9□□□□□ -0.5
PBX1-212ENST00000540236 TBC1D25Q3MII6 688 aa11.9□□□□□ -0.5
PBX1-212ENST00000540236 CHADLQ6NUI6 762 aa11.9□□□□□ -0.5
PBX1-212ENST00000540236 LPIN2Q92539 896 aa11.9□□□□□ -0.5
PBX1-212ENST00000540236 GIPC1O14908 333 aa11.9□□□□□ -0.5
PBX1-212ENST00000540236 ABCC1P33527 1531 aa11.9□□□□□ -0.5
PBX1-212ENST00000540236 EIF3BP55884 814 aaKnown RBP11.9□□□□□ -0.5
PBX1-212ENST00000540236 MED21Q13503 144 aa11.9□□□□□ -0.5
PBX1-212ENST00000540236 FAM47AQ5JRC9 791 aa11.9□□□□□ -0.5
PBX1-212ENST00000540236 KRT27Q7Z3Y8 459 aa11.9□□□□□ -0.5
PBX1-212ENST00000540236 MTDHQ86UE4 582 aaKnown RBP11.9□□□□□ -0.5
PBX1-212ENST00000540236 SATL1Q86VE3 508 aa11.9□□□□□ -0.5
PBX1-212ENST00000540236 AMOTL2Q9Y2J4 779 aa11.9□□□□□ -0.5
PBX1-212ENST00000540236 CFAP65Q6ZU64 1925 aaKnown RBP11.9□□□□□ -0.5
PBX1-212ENST00000540236 MCF2LO15068 1137 aa11.9□□□□□ -0.5
PBX1-212ENST00000540236 GYS1P13807 737 aa11.9□□□□□ -0.5
PBX1-212ENST00000540236 NCF2P19878 526 aaPredicted RBP11.9□□□□□ -0.5
PBX1-212ENST00000540236 RNF19BQ6ZMZ0 732 aa11.9□□□□□ -0.5
PBX1-212ENST00000540236 XAGE2Q96GT9 111 aa11.9□□□□□ -0.5
PBX1-212ENST00000540236 GIMAP4Q9NUV9 329 aa11.9□□□□□ -0.5
PBX1-212ENST00000540236 USP1O94782 785 aa11.9□□□□□ -0.51
PBX1-212ENST00000540236 ATF2P15336 505 aa11.9□□□□□ -0.51
PBX1-212ENST00000540236 RBM44Q6ZP01 1051 aaKnown RBP11.9□□□□□ -0.51
PBX1-212ENST00000540236 CCT6BQ92526 530 aa11.9□□□□□ -0.51
PBX1-212ENST00000540236 ACSBG1Q96GR2 724 aa11.9□□□□□ -0.51
PBX1-212ENST00000540236 KLF6Q99612 283 aaPredicted RBP11.9□□□□□ -0.51
PBX1-212ENST00000540236 KIAA1683Q9H0B3 1180 aa11.9□□□□□ -0.51
PBX1-212ENST00000540236 MARCOQ9UEW3 520 aaPredicted RBP11.9□□□□□ -0.51
PBX1-212ENST00000540236 BCAP29Q9UHQ4 241 aa11.9□□□□□ -0.51
PBX1-212ENST00000540236 ITGA4P13612 1032 aa11.89□□□□□ -0.51
PBX1-212ENST00000540236 BARGINQ6ZT62 677 aa11.89□□□□□ -0.51
PBX1-212ENST00000540236 TMTC3Q6ZXV5 915 aa11.89□□□□□ -0.51
PBX1-212ENST00000540236 SYCE1Q8N0S2 351 aa11.89□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms