RNA–Protein interactions for RNA: ENST00000539739.5

DDB1-216, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 5

Gene DDB1, Length 1,624 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-216ENST00000539739 E9PMD0 336 aa17.2■□□□□ 0.34
DDB1-216ENST00000539739 STBD1O95210 358 aa17.2■□□□□ 0.34
DDB1-216ENST00000539739 EYA4O95677 639 aa17.2■□□□□ 0.34
DDB1-216ENST00000539739 SMIM10L2AP0DMW4 78 aa17.2■□□□□ 0.34
DDB1-216ENST00000539739 SMIM10L2BP0DMW5 78 aa17.2■□□□□ 0.34
DDB1-216ENST00000539739 GNAT1P11488 350 aa17.2■□□□□ 0.34
DDB1-216ENST00000539739 INSRRP14616 1297 aa17.2■□□□□ 0.34
DDB1-216ENST00000539739 NDUFA8P51970 172 aa17.2■□□□□ 0.34
DDB1-216ENST00000539739 FAM47CQ5HY64 1035 aa17.2■□□□□ 0.34
DDB1-216ENST00000539739 DHX58Q96C10 678 aa17.2■□□□□ 0.34
DDB1-216ENST00000539739 CUEDC2Q9H467 287 aa17.2■□□□□ 0.34
DDB1-216ENST00000539739 USP25Q9UHP3 1055 aa17.2■□□□□ 0.34
DDB1-216ENST00000539739 COL1A2P08123 1366 aa17.19■□□□□ 0.34
DDB1-216ENST00000539739 ARHGEF35A5YM69 484 aa17.19■□□□□ 0.34
DDB1-216ENST00000539739 ZBTB39O15060 712 aa17.19■□□□□ 0.34
DDB1-216ENST00000539739 EN2P19622 333 aaPredicted RBP17.19■□□□□ 0.34
DDB1-216ENST00000539739 CLCN1P35523 988 aa17.19■□□□□ 0.34
DDB1-216ENST00000539739 RARRES1P49788 294 aa17.19■□□□□ 0.34
DDB1-216ENST00000539739 MNX1P50219 401 aaPredicted RBP17.19■□□□□ 0.34
DDB1-216ENST00000539739 PTPN11Q06124 597 aaPredicted RBP17.19■□□□□ 0.34
DDB1-216ENST00000539739 MTERF2Q49AM1 385 aa17.19■□□□□ 0.34
DDB1-216ENST00000539739 NECAB2Q7Z6G3 386 aa17.19■□□□□ 0.34
DDB1-216ENST00000539739 EXOC8Q8IYI6 725 aa17.19■□□□□ 0.34
DDB1-216ENST00000539739 LARP4BQ92615 738 aaKnown RBP17.19■□□□□ 0.34
DDB1-216ENST00000539739 RAD54LQ92698 747 aa17.19■□□□□ 0.34
DDB1-216ENST00000539739 BHMT2Q9H2M3 363 aa17.19■□□□□ 0.34
DDB1-216ENST00000539739 GOLPH3LQ9H4A5 285 aa17.19■□□□□ 0.34
DDB1-216ENST00000539739 C11orf49Q9H6J7 331 aa17.19■□□□□ 0.34
DDB1-216ENST00000539739 CYP26B1Q9NR63 512 aa17.19■□□□□ 0.34
DDB1-216ENST00000539739 HDAC6Q9UBN7 1215 aa17.19■□□□□ 0.34
DDB1-216ENST00000539739 SCN10AQ9Y5Y9 1956 aa17.19■□□□□ 0.34
DDB1-216ENST00000539739 BRCA2P51587 3418 aa17.19■□□□□ 0.34
DDB1-216ENST00000539739 WDR81Q562E7 1941 aa17.19■□□□□ 0.34
DDB1-216ENST00000539739 A0A087X0B3 334 aa17.18■□□□□ 0.34
DDB1-216ENST00000539739 C17orf102A2RUQ5 167 aa17.18■□□□□ 0.34
DDB1-216ENST00000539739 TMEM150BA6NC51 233 aa17.18■□□□□ 0.34
DDB1-216ENST00000539739 SSBP05455 408 aaKnown RBP eCLIP17.18■□□□□ 0.34
DDB1-216ENST00000539739 TPM2P07951 284 aa17.18■□□□□ 0.34
DDB1-216ENST00000539739 PLA2G4BP0C869 781 aa17.18■□□□□ 0.34
DDB1-216ENST00000539739 PTMSP20962 102 aa17.18■□□□□ 0.34
DDB1-216ENST00000539739 NPEPPSP55786 919 aa17.18■□□□□ 0.34
DDB1-216ENST00000539739 IGBP1P78318 339 aa17.18■□□□□ 0.34
DDB1-216ENST00000539739 FAM160A1Q05DH4 1040 aa17.18■□□□□ 0.34
DDB1-216ENST00000539739 GRIK4Q16099 956 aa17.18■□□□□ 0.34
DDB1-216ENST00000539739 PLA2G4FQ68DD2 849 aa17.18■□□□□ 0.34
DDB1-216ENST00000539739 KCNK18Q7Z418 384 aa17.18■□□□□ 0.34
DDB1-216ENST00000539739 SESTD1Q86VW0 696 aa17.18■□□□□ 0.34
DDB1-216ENST00000539739 CEP57L1Q8IYX8 460 aa17.18■□□□□ 0.34
DDB1-216ENST00000539739 CCDC34Q96HJ3 373 aa17.18■□□□□ 0.34
DDB1-216ENST00000539739 PAWRQ96IZ0 340 aaKnown RBP17.18■□□□□ 0.34
DDB1-216ENST00000539739 ARVCFO00192 962 aa17.18■□□□□ 0.34
DDB1-216ENST00000539739 ZNF202O95125 648 aa17.18■□□□□ 0.34
DDB1-216ENST00000539739 COL6A1P12109 1028 aa17.18■□□□□ 0.34
DDB1-216ENST00000539739 TBC1D8BQ0IIM8 1120 aa17.18■□□□□ 0.34
DDB1-216ENST00000539739 E2F4Q16254 413 aa17.18■□□□□ 0.34
DDB1-216ENST00000539739 NAALADL2Q58DX5 795 aa17.18■□□□□ 0.34
DDB1-216ENST00000539739 SV2BQ7L1I2 683 aa17.18■□□□□ 0.34
DDB1-216ENST00000539739 SYT2Q8N9I0 419 aaPredicted RBP17.18■□□□□ 0.34
DDB1-216ENST00000539739 DIS3LQ8TF46 1054 aaKnown RBP17.18■□□□□ 0.34
DDB1-216ENST00000539739 JPH2Q9BR39 696 aaPredicted RBP17.18■□□□□ 0.34
DDB1-216ENST00000539739 SH2D3AQ9BRG2 576 aa17.18■□□□□ 0.34
DDB1-216ENST00000539739 MAGEF1Q9HAY2 307 aa17.18■□□□□ 0.34
DDB1-216ENST00000539739 BLOC1S4Q9NUP1 217 aa17.18■□□□□ 0.34
DDB1-216ENST00000539739 SETD4Q9NVD3 440 aa17.18■□□□□ 0.34
DDB1-216ENST00000539739 GTF2IRD1Q9UHL9 959 aa17.18■□□□□ 0.34
DDB1-216ENST00000539739 PRDM4Q9UKN5 801 aa17.18■□□□□ 0.34
DDB1-216ENST00000539739 GRIN2DO15399 1336 aa17.17■□□□□ 0.34
DDB1-216ENST00000539739 CCDC85CA6NKD9 419 aa17.17■□□□□ 0.34
DDB1-216ENST00000539739 MAGEB2O15479 319 aa17.17■□□□□ 0.34
DDB1-216ENST00000539739 SLFN14P0C7P3 912 aa17.17■□□□□ 0.34
DDB1-216ENST00000539739 POLGP54098 1239 aaPredicted RBP17.17■□□□□ 0.34
DDB1-216ENST00000539739 DHX8Q14562 1220 aaKnown RBP17.17■□□□□ 0.34
DDB1-216ENST00000539739 MCM6Q14566 821 aa17.17■□□□□ 0.34
DDB1-216ENST00000539739 TARBP2Q15633 366 aaKnown RBP17.17■□□□□ 0.34
DDB1-216ENST00000539739 SLC43A3Q8NBI5 491 aa17.17■□□□□ 0.34
DDB1-216ENST00000539739 SLC7A3Q8WY07 619 aa17.17■□□□□ 0.34
DDB1-216ENST00000539739 LRRC27Q9C0I9 530 aa17.17■□□□□ 0.34
DDB1-216ENST00000539739 MROH7Q68CQ1 1323 aa17.16■□□□□ 0.34
DDB1-216ENST00000539739 DGAT1O75907 488 aa17.16■□□□□ 0.34
DDB1-216ENST00000539739 RFC5P40937 340 aa17.16■□□□□ 0.34
DDB1-216ENST00000539739 SLC12A3P55017 1021 aa17.16■□□□□ 0.34
DDB1-216ENST00000539739 AMPD3Q01432 767 aa17.16■□□□□ 0.34
DDB1-216ENST00000539739 PADI6Q6TGC4 694 aa17.16■□□□□ 0.34
DDB1-216ENST00000539739 SLC39A5Q6ZMH5 540 aa17.16■□□□□ 0.34
DDB1-216ENST00000539739 FMR1NBQ8N0W7 255 aaPredicted RBP17.16■□□□□ 0.34
DDB1-216ENST00000539739 RETREG2Q8NC44 543 aa17.16■□□□□ 0.34
DDB1-216ENST00000539739 CNNM3Q8NE01 707 aa17.16■□□□□ 0.34
DDB1-216ENST00000539739 ENGASEQ8NFI3 743 aa17.16■□□□□ 0.34
DDB1-216ENST00000539739 PPP1R13LQ8WUF5 828 aa17.16■□□□□ 0.34
DDB1-216ENST00000539739 LMBR1Q8WVP7 490 aa17.16■□□□□ 0.34
DDB1-216ENST00000539739 TRAPPC12Q8WVT3 735 aa17.16■□□□□ 0.34
DDB1-216ENST00000539739 SERTAD1Q9UHV2 236 aa17.16■□□□□ 0.34
DDB1-216ENST00000539739 ZBTB42B2RXF5 422 aa17.15■□□□□ 0.34
DDB1-216ENST00000539739 KINO60870 393 aaKnown RBP17.15■□□□□ 0.34
DDB1-216ENST00000539739 NR1I2O75469 434 aa17.15■□□□□ 0.34
DDB1-216ENST00000539739 LIG1P18858 919 aa17.15■□□□□ 0.34
DDB1-216ENST00000539739 KLRC1P26715 233 aa17.15■□□□□ 0.34
DDB1-216ENST00000539739 ATN1P54259 1190 aaPredicted RBP17.15■□□□□ 0.34
DDB1-216ENST00000539739 SNW1Q13573 536 aaKnown RBP17.15■□□□□ 0.34
DDB1-216ENST00000539739 KANK3Q6NY19 840 aa17.15■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms