RNA–Protein interactions for RNA: ENST00000539372.5

TNFRSF1A-212, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 2

Gene TNFRSF1A, Length 1,063 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-212ENST00000539372 RIT2Q99578 217 aa21.55■■□□□ 1.04
TNFRSF1A-212ENST00000539372 TEKT3Q9BXF9 490 aa21.55■■□□□ 1.04
TNFRSF1A-212ENST00000539372 UNC45AQ9H3U1 944 aa21.55■■□□□ 1.04
TNFRSF1A-212ENST00000539372 CDHR5Q9HBB8 845 aa21.55■■□□□ 1.04
TNFRSF1A-212ENST00000539372 LMCD1Q9NZU5 365 aa21.55■■□□□ 1.04
TNFRSF1A-212ENST00000539372 SQORQ9Y6N5 450 aa21.55■■□□□ 1.04
TNFRSF1A-212ENST00000539372 NONOQ15233 471 aaKnown RBP eCLIP21.54■■□□□ 1.04
TNFRSF1A-212ENST00000539372 INF2Q27J81 1249 aa21.54■■□□□ 1.04
TNFRSF1A-212ENST00000539372 TMEM192Q8IY95 271 aa21.54■■□□□ 1.04
TNFRSF1A-212ENST00000539372 METTL13Q8N6R0 699 aa21.54■■□□□ 1.04
TNFRSF1A-212ENST00000539372 IL27Q8NEV9 243 aa21.54■■□□□ 1.04
TNFRSF1A-212ENST00000539372 GJB4Q9NTQ9 266 aa21.54■■□□□ 1.04
TNFRSF1A-212ENST00000539372 KDM3AQ9Y4C1 1321 aa21.54■■□□□ 1.04
TNFRSF1A-212ENST00000539372 CYP3A7-CYP3A51PA0A087WV96 503 aa21.53■■□□□ 1.04
TNFRSF1A-212ENST00000539372 ZNF862O60290 1169 aa21.53■■□□□ 1.04
TNFRSF1A-212ENST00000539372 CTDNEP1O95476 244 aa21.53■■□□□ 1.04
TNFRSF1A-212ENST00000539372 CYP3A7P24462 503 aa21.53■■□□□ 1.04
TNFRSF1A-212ENST00000539372 NFX1Q12986 1120 aaKnown RBP21.53■■□□□ 1.04
TNFRSF1A-212ENST00000539372 ANKRD1Q15327 319 aa21.53■■□□□ 1.04
TNFRSF1A-212ENST00000539372 UGCGQ16739 394 aa21.53■■□□□ 1.04
TNFRSF1A-212ENST00000539372 KRT25Q7Z3Z0 450 aa21.53■■□□□ 1.04
TNFRSF1A-212ENST00000539372 FAM177A1Q8N128 213 aaPredicted RBP21.53■■□□□ 1.04
TNFRSF1A-212ENST00000539372 FIBCD1Q8N539 461 aa21.53■■□□□ 1.04
TNFRSF1A-212ENST00000539372 NECAB1Q8N987 351 aa21.53■■□□□ 1.04
TNFRSF1A-212ENST00000539372 ADAMTS19Q8TE59 1207 aa21.53■■□□□ 1.04
TNFRSF1A-212ENST00000539372 SAMD11Q96NU1 681 aa21.53■■□□□ 1.04
TNFRSF1A-212ENST00000539372 PHF20Q9BVI0 1012 aa21.53■■□□□ 1.04
TNFRSF1A-212ENST00000539372 FTHL17Q9BXU8 183 aa21.53■■□□□ 1.04
TNFRSF1A-212ENST00000539372 TMX1Q9H3N1 280 aa21.53■■□□□ 1.04
TNFRSF1A-212ENST00000539372 STK36Q9NRP7 1315 aa21.53■■□□□ 1.04
TNFRSF1A-212ENST00000539372 XIRP2A4UGR9 3374 aa21.53■■□□□ 1.04
TNFRSF1A-212ENST00000539372 PSMD10O75832 226 aa21.52■■□□□ 1.04
TNFRSF1A-212ENST00000539372 VTNP04004 478 aa21.52■■□□□ 1.04
TNFRSF1A-212ENST00000539372 IBSPP21815 317 aaPredicted RBP21.52■■□□□ 1.04
TNFRSF1A-212ENST00000539372 KCNQ1P51787 676 aa21.52■■□□□ 1.04
TNFRSF1A-212ENST00000539372 JAK3P52333 1124 aa21.52■■□□□ 1.04
TNFRSF1A-212ENST00000539372 PRKCEQ02156 737 aa21.52■■□□□ 1.04
TNFRSF1A-212ENST00000539372 KIZQ2M2Z5 673 aa21.52■■□□□ 1.04
TNFRSF1A-212ENST00000539372 TMEM40Q8WWA1 233 aa21.52■■□□□ 1.04
TNFRSF1A-212ENST00000539372 FAM167AQ96KS9 214 aa21.52■■□□□ 1.04
TNFRSF1A-212ENST00000539372 ORC3Q9UBD5 711 aaPredicted RBP21.52■■□□□ 1.04
TNFRSF1A-212ENST00000539372 DDX25Q9UHL0 483 aaKnown RBP21.52■■□□□ 1.04
TNFRSF1A-212ENST00000539372 CEP131Q9UPN4 1083 aa21.52■■□□□ 1.04
TNFRSF1A-212ENST00000539372 NOC2LQ9Y3T9 749 aaKnown RBP21.52■■□□□ 1.04
TNFRSF1A-212ENST00000539372 ADGRA3Q8IWK6 1321 aa21.52■■□□□ 1.03
TNFRSF1A-212ENST00000539372 COL4A6Q14031 1691 aa21.51■■□□□ 1.03
TNFRSF1A-212ENST00000539372 MYH9P35579 1960 aaKnown RBP21.51■■□□□ 1.03
TNFRSF1A-212ENST00000539372 CCDC194A0A1B0GVG4 234 aa21.51■■□□□ 1.03
TNFRSF1A-212ENST00000539372 RPS6KA5O75582 802 aa21.51■■□□□ 1.03
TNFRSF1A-212ENST00000539372 LARGE1O95461 756 aa21.51■■□□□ 1.03
TNFRSF1A-212ENST00000539372 SEC24BO95487 1268 aa21.51■■□□□ 1.03
TNFRSF1A-212ENST00000539372 OATP04181 439 aa21.51■■□□□ 1.03
TNFRSF1A-212ENST00000539372 XBP1P17861 261 aa21.51■■□□□ 1.03
TNFRSF1A-212ENST00000539372 SFNP31947 248 aa21.51■■□□□ 1.03
TNFRSF1A-212ENST00000539372 CTNNB1P35222 781 aa21.51■■□□□ 1.03
TNFRSF1A-212ENST00000539372 CLCN3P51790 818 aa21.51■■□□□ 1.03
TNFRSF1A-212ENST00000539372 GPM6BQ13491 265 aa21.51■■□□□ 1.03
TNFRSF1A-212ENST00000539372 ME3Q16798 604 aa21.51■■□□□ 1.03
TNFRSF1A-212ENST00000539372 LETM2Q2VYF4 491 aa21.51■■□□□ 1.03
TNFRSF1A-212ENST00000539372 MIER3Q7Z3K6 550 aa21.51■■□□□ 1.03
TNFRSF1A-212ENST00000539372 ETNPPLQ8TBG4 499 aa21.51■■□□□ 1.03
TNFRSF1A-212ENST00000539372 OXER1Q8TDS5 423 aa21.51■■□□□ 1.03
TNFRSF1A-212ENST00000539372 HLA-CQ95604 372 aa21.51■■□□□ 1.03
TNFRSF1A-212ENST00000539372 OSMRQ99650 979 aa21.51■■□□□ 1.03
TNFRSF1A-212ENST00000539372 RC3H2Q9HBD1 1191 aaKnown RBP21.51■■□□□ 1.03
TNFRSF1A-212ENST00000539372 ERVK-5Q9HDB9 667 aa21.51■■□□□ 1.03
TNFRSF1A-212ENST00000539372 COG5Q9UP83 839 aa21.51■■□□□ 1.03
TNFRSF1A-212ENST00000539372 LOXHD1Q8IVV2 1947 aa21.51■■□□□ 1.03
TNFRSF1A-212ENST00000539372 H3BNC9 293 aa21.5■■□□□ 1.03
TNFRSF1A-212ENST00000539372 SLC37A4O43826 429 aa21.5■■□□□ 1.03
TNFRSF1A-212ENST00000539372 DGKIO75912 1065 aa21.5■■□□□ 1.03
TNFRSF1A-212ENST00000539372 BTG3Q14201 252 aaPredicted RBP21.5■■□□□ 1.03
TNFRSF1A-212ENST00000539372 AAK1Q2M2I8 961 aa21.5■■□□□ 1.03
TNFRSF1A-212ENST00000539372 EFCAB12Q6NXP0 572 aa21.5■■□□□ 1.03
TNFRSF1A-212ENST00000539372 MOXD1Q6UVY6 613 aa21.5■■□□□ 1.03
TNFRSF1A-212ENST00000539372 LRRC71Q8N4P6 559 aa21.5■■□□□ 1.03
TNFRSF1A-212ENST00000539372 ZNF689Q96CS4 500 aaPredicted RBP21.5■■□□□ 1.03
TNFRSF1A-212ENST00000539372 MBOAT7Q96N66 472 aa21.5■■□□□ 1.03
TNFRSF1A-212ENST00000539372 NRBP2Q9NSY0 501 aa21.5■■□□□ 1.03
TNFRSF1A-212ENST00000539372 TTC3P53804 2025 aa21.5■■□□□ 1.03
TNFRSF1A-212ENST00000539372 MAGEB2O15479 319 aa21.49■■□□□ 1.03
TNFRSF1A-212ENST00000539372 MGEA5O60502 916 aa21.49■■□□□ 1.03
TNFRSF1A-212ENST00000539372 GPR32O75388 356 aa21.49■■□□□ 1.03
TNFRSF1A-212ENST00000539372 LINC00271P0C7V0 271 aa21.49■■□□□ 1.03
TNFRSF1A-212ENST00000539372 NEK4P51957 841 aa21.49■■□□□ 1.03
TNFRSF1A-212ENST00000539372 PTPROQ16827 1216 aa21.49■■□□□ 1.03
TNFRSF1A-212ENST00000539372 PIK3AP1Q6ZUJ8 805 aa21.49■■□□□ 1.03
TNFRSF1A-212ENST00000539372 NPAS4Q8IUM7 802 aa21.49■■□□□ 1.03
TNFRSF1A-212ENST00000539372 MRPL38Q96DV4 380 aaKnown RBP21.49■■□□□ 1.03
TNFRSF1A-212ENST00000539372 UHRF1Q96T88 793 aaPredicted RBP21.49■■□□□ 1.03
TNFRSF1A-212ENST00000539372 ST3GAL5Q9UNP4 418 aa21.49■■□□□ 1.03
TNFRSF1A-212ENST00000539372 AKT3Q9Y243 479 aa21.49■■□□□ 1.03
TNFRSF1A-212ENST00000539372 EVPLQ92817 2033 aa21.49■■□□□ 1.03
TNFRSF1A-212ENST00000539372 BMP1P13497 986 aa21.48■■□□□ 1.03
TNFRSF1A-212ENST00000539372 FDPSP14324 419 aaKnown RBP21.48■■□□□ 1.03
TNFRSF1A-212ENST00000539372 BMPR1AP36894 532 aa21.48■■□□□ 1.03
TNFRSF1A-212ENST00000539372 GATMP50440 423 aa21.48■■□□□ 1.03
TNFRSF1A-212ENST00000539372 CRYBB1P53674 252 aaPredicted RBP21.48■■□□□ 1.03
TNFRSF1A-212ENST00000539372 PAN2Q504Q3 1202 aaKnown RBP21.48■■□□□ 1.03
TNFRSF1A-212ENST00000539372 NEK8Q86SG6 692 aa21.48■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms