RNA–Protein interactions for RNA: ENST00000538834.5

CD9-208, Transcript of CD9 molecule, humanhuman

TSL 5

Gene CD9, Length 564 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD9-208ENST00000538834 BAG4O95429 457 aaKnown RBP15.42■□□□□ 0.06
CD9-208ENST00000538834 P4HBP07237 508 aaKnown RBP15.42■□□□□ 0.06
CD9-208ENST00000538834 WDR5P61964 334 aaKnown RBP15.42■□□□□ 0.06
CD9-208ENST00000538834 PSMC5P62195 406 aa15.42■□□□□ 0.06
CD9-208ENST00000538834 IGBP1P78318 339 aa15.42■□□□□ 0.06
CD9-208ENST00000538834 MRPS6P82932 125 aaKnown RBP15.42■□□□□ 0.06
CD9-208ENST00000538834 FAM43BQ6ZT52 329 aaPredicted RBP15.42■□□□□ 0.06
CD9-208ENST00000538834 CRIPAKQ8N1N5 446 aa15.42■□□□□ 0.06
CD9-208ENST00000538834 PBX4Q9BYU1 374 aa15.42■□□□□ 0.06
CD9-208ENST00000538834 TTYH1Q9H313 450 aaPredicted RBP15.42■□□□□ 0.06
CD9-208ENST00000538834 NRBP2Q9NSY0 501 aa15.42■□□□□ 0.06
CD9-208ENST00000538834 TCEAL9Q9UHQ7 104 aa15.42■□□□□ 0.06
CD9-208ENST00000538834 PCDHA12Q9UN75 941 aa15.42■□□□□ 0.06
CD9-208ENST00000538834 CEP131Q9UPN4 1083 aa15.42■□□□□ 0.06
CD9-208ENST00000538834 SAMM50Q9Y512 469 aa15.42■□□□□ 0.06
CD9-208ENST00000538834 MYH11P35749 1972 aa15.42■□□□□ 0.06
CD9-208ENST00000538834 KIAA1671Q9BY89 1806 aa15.41■□□□□ 0.06
CD9-208ENST00000538834 REV3LO60673 3130 aa15.41■□□□□ 0.06
CD9-208ENST00000538834 EFCAB14O75071 495 aa15.41■□□□□ 0.06
CD9-208ENST00000538834 ACTN1P12814 892 aa15.41■□□□□ 0.06
CD9-208ENST00000538834 QARSP47897 775 aaKnown RBP15.41■□□□□ 0.06
CD9-208ENST00000538834 LPIN1Q14693 890 aa15.41■□□□□ 0.06
CD9-208ENST00000538834 CALCRLQ16602 461 aa15.41■□□□□ 0.06
CD9-208ENST00000538834 RSPH3Q86UC2 560 aa15.41■□□□□ 0.06
CD9-208ENST00000538834 SLC9A7Q96T83 725 aa15.41■□□□□ 0.06
CD9-208ENST00000538834 CELF4Q9BZC1 486 aaKnown RBP15.41■□□□□ 0.06
CD9-208ENST00000538834 MTIF3Q9H2K0 278 aaKnown RBP15.41■□□□□ 0.06
CD9-208ENST00000538834 TTC12Q9H892 705 aaPredicted RBP15.41■□□□□ 0.06
CD9-208ENST00000538834 EIF4ENIF1Q9NRA8 985 aaKnown RBP15.41■□□□□ 0.06
CD9-208ENST00000538834 MTMR10Q9NXD2 777 aa15.41■□□□□ 0.06
CD9-208ENST00000538834 CDY2AQ9Y6F7 541 aa15.41■□□□□ 0.06
CD9-208ENST00000538834 SLC4A7Q9Y6M7 1214 aa15.41■□□□□ 0.06
CD9-208ENST00000538834 LOC101059915A0A1B0GWI6 518 aaPredicted RBP15.4■□□□□ 0.06
CD9-208ENST00000538834 GPR32O75388 356 aa15.4■□□□□ 0.06
CD9-208ENST00000538834 SPATA31C1P0DKV0 1188 aa15.4■□□□□ 0.06
CD9-208ENST00000538834 PBX2P40425 430 aa15.4■□□□□ 0.06
CD9-208ENST00000538834 TTC38Q5R3I4 469 aa15.4■□□□□ 0.06
CD9-208ENST00000538834 IER5Q5VY09 327 aa15.4■□□□□ 0.06
CD9-208ENST00000538834 ZNF710Q8N1W2 664 aa15.4■□□□□ 0.06
CD9-208ENST00000538834 USP38Q8NB14 1042 aa15.4■□□□□ 0.06
CD9-208ENST00000538834 BANK1Q8NDB2 785 aa15.4■□□□□ 0.06
CD9-208ENST00000538834 FTOQ9C0B1 505 aaKnown RBP eCLIP15.4■□□□□ 0.06
CD9-208ENST00000538834 AGO3Q9H9G7 860 aaKnown RBP15.4■□□□□ 0.06
CD9-208ENST00000538834 CDHR5Q9HBB8 845 aa15.4■□□□□ 0.06
CD9-208ENST00000538834 RGL1Q9NZL6 768 aa15.4■□□□□ 0.06
CD9-208ENST00000538834 SMC3Q9UQE7 1217 aa15.4■□□□□ 0.06
CD9-208ENST00000538834 PPME1Q9Y570 386 aa15.4■□□□□ 0.06
CD9-208ENST00000538834 PCDHB6Q9Y5E3 794 aa15.4■□□□□ 0.06
CD9-208ENST00000538834 PCDHA11Q9Y5I1 949 aa15.4■□□□□ 0.06
CD9-208ENST00000538834 ATG2AQ2TAZ0 1938 aa15.4■□□□□ 0.06
CD9-208ENST00000538834 TCHHQ07283 1943 aa15.39■□□□□ 0.05
CD9-208ENST00000538834 K7ELQ4 463 aaPredicted RBP15.39■□□□□ 0.05
CD9-208ENST00000538834 MAFO75444 373 aaPredicted RBP15.39■□□□□ 0.05
CD9-208ENST00000538834 CTSHP09668 335 aa15.39■□□□□ 0.05
CD9-208ENST00000538834 DNAJB2P25686 324 aa15.39■□□□□ 0.05
CD9-208ENST00000538834 MCM7P33993 719 aa15.39■□□□□ 0.05
CD9-208ENST00000538834 FXR2P51116 673 aaKnown RBP eCLIP15.39■□□□□ 0.05
CD9-208ENST00000538834 IKBKEQ14164 716 aa15.39■□□□□ 0.05
CD9-208ENST00000538834 ZNF174Q15697 407 aa15.39■□□□□ 0.05
CD9-208ENST00000538834 TSHZ1Q6ZSZ6 1077 aa15.39■□□□□ 0.05
CD9-208ENST00000538834 ZNF579Q8NAF0 562 aaKnown RBP15.39■□□□□ 0.05
CD9-208ENST00000538834 NEK9Q8TD19 979 aa15.39■□□□□ 0.05
CD9-208ENST00000538834 APBB2Q92870 758 aa15.39■□□□□ 0.05
CD9-208ENST00000538834 EIF2AK1Q9BQI3 630 aaKnown RBP15.39■□□□□ 0.05
CD9-208ENST00000538834 ADAMTS10Q9H324 1103 aa15.39■□□□□ 0.05
CD9-208ENST00000538834 SEMA6BQ9H3T3 888 aa15.39■□□□□ 0.05
CD9-208ENST00000538834 DHX33Q9H6R0 707 aaKnown RBP15.39■□□□□ 0.05
CD9-208ENST00000538834 YBX2Q9Y2T7 364 aaKnown RBP15.39■□□□□ 0.05
CD9-208ENST00000538834 TRPV2Q9Y5S1 764 aa15.39■□□□□ 0.05
CD9-208ENST00000538834 EYSQ5T1H1 3165 aa15.39■□□□□ 0.05
CD9-208ENST00000538834 TMEM150BA6NC51 233 aa15.38■□□□□ 0.05
CD9-208ENST00000538834 DKC1O60832 514 aaKnown RBP eCLIP15.38■□□□□ 0.05
CD9-208ENST00000538834 OR52Z1P0C646 297 aa15.38■□□□□ 0.05
CD9-208ENST00000538834 XRCC6P12956 609 aaKnown RBP eCLIP15.38■□□□□ 0.05
CD9-208ENST00000538834 ATP2A2P16615 1042 aaKnown RBP15.38■□□□□ 0.05
CD9-208ENST00000538834 PRPHP41219 470 aa15.38■□□□□ 0.05
CD9-208ENST00000538834 TXKP42681 527 aa15.38■□□□□ 0.05
CD9-208ENST00000538834 DEFB103AP81534 67 aa15.38■□□□□ 0.05
CD9-208ENST00000538834 PDIA5Q14554 519 aa15.38■□□□□ 0.05
CD9-208ENST00000538834 NBR1Q14596 966 aa15.38■□□□□ 0.05
CD9-208ENST00000538834 LARP1BQ659C4 914 aaKnown RBP15.38■□□□□ 0.05
CD9-208ENST00000538834 EFCAB12Q6NXP0 572 aa15.38■□□□□ 0.05
CD9-208ENST00000538834 LIN28BQ6ZN17 250 aaKnown RBP eCLIP15.38■□□□□ 0.05
CD9-208ENST00000538834 RTN4RL1Q86UN2 441 aaPredicted RBP15.38■□□□□ 0.05
CD9-208ENST00000538834 HERC6Q8IVU3 1022 aa15.38■□□□□ 0.05
CD9-208ENST00000538834 CKAP2LQ8IYA6 745 aa15.38■□□□□ 0.05
CD9-208ENST00000538834 IGSF22Q8N9C0 903 aa15.38■□□□□ 0.05
CD9-208ENST00000538834 TMEM40Q8WWA1 233 aa15.38■□□□□ 0.05
CD9-208ENST00000538834 SEPT8Q92599 483 aa15.38■□□□□ 0.05
CD9-208ENST00000538834 DYDC2Q96IM9 177 aa15.38■□□□□ 0.05
CD9-208ENST00000538834 LXNQ9BS40 222 aa15.38■□□□□ 0.05
CD9-208ENST00000538834 IFIH1Q9BYX4 1025 aaKnown RBP15.38■□□□□ 0.05
CD9-208ENST00000538834 FAM49AQ9H0Q0 323 aaPredicted RBP15.38■□□□□ 0.05
CD9-208ENST00000538834 ZSWIM4Q9H7M6 989 aa15.38■□□□□ 0.05
CD9-208ENST00000538834 PRUNE2Q8WUY3 3088 aa15.37■□□□□ 0.05
CD9-208ENST00000538834 POTEMA6NI47 508 aa15.37■□□□□ 0.05
CD9-208ENST00000538834 LAD1O00515 517 aa15.37■□□□□ 0.05
CD9-208ENST00000538834 ZBTB39O15060 712 aa15.37■□□□□ 0.05
CD9-208ENST00000538834 GJB5O95377 273 aa15.37■□□□□ 0.05
CD9-208ENST00000538834 GHRP10912 638 aa15.37■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms