RNA–Protein interactions for RNA: ENST00000538828.1

CLTCL1-205, Transcript of clathrin heavy chain like 1, human

TSL 5

Gene CLTCL1, Length 448 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CLTCL1-205	ENST00000538828	TTC3	P53804	2025 aa		13.86	□□□□□ -0.19
CLTCL1-205	ENST00000538828	CTSH	P09668	335 aa		13.85	□□□□□ -0.19
CLTCL1-205	ENST00000538828	POU3F3	P20264	500 aa	Predicted RBP	13.85	□□□□□ -0.19
CLTCL1-205	ENST00000538828	TRAPPC10	P48553	1259 aa		13.85	□□□□□ -0.19
CLTCL1-205	ENST00000538828	PSMC5	P62195	406 aa		13.85	□□□□□ -0.19
CLTCL1-205	ENST00000538828	IGBP1	P78318	339 aa		13.85	□□□□□ -0.19
CLTCL1-205	ENST00000538828	HTRA4	P83105	476 aa	Predicted RBP	13.85	□□□□□ -0.19
CLTCL1-205	ENST00000538828	LPIN1	Q14693	890 aa		13.85	□□□□□ -0.19
CLTCL1-205	ENST00000538828	LINC01465	Q8N7H1	131 aa		13.85	□□□□□ -0.19
CLTCL1-205	ENST00000538828	FAM184A	Q8NB25	1140 aa		13.85	□□□□□ -0.19
CLTCL1-205	ENST00000538828	HAS1	Q92839	578 aa		13.85	□□□□□ -0.19
CLTCL1-205	ENST00000538828	TOP1MT	Q969P6	601 aa		13.85	□□□□□ -0.19
CLTCL1-205	ENST00000538828	JPH2	Q9BR39	696 aa	Predicted RBP	13.85	□□□□□ -0.19
CLTCL1-205	ENST00000538828	RNF216	Q9NWF9	866 aa	Predicted RBP	13.85	□□□□□ -0.19
CLTCL1-205	ENST00000538828	VAV3	Q9UKW4	847 aa		13.85	□□□□□ -0.19
CLTCL1-205	ENST00000538828	INSL6	Q9Y581	213 aa		13.85	□□□□□ -0.19
CLTCL1-205	ENST00000538828	PTPRS	Q13332	1948 aa		13.85	□□□□□ -0.19
CLTCL1-205	ENST00000538828	SI	P14410	1827 aa		13.85	□□□□□ -0.19
CLTCL1-205	ENST00000538828	TRANK1	O15050	2925 aa		13.84	□□□□□ -0.19
CLTCL1-205	ENST00000538828	TLL1	O43897	1013 aa		13.84	□□□□□ -0.19
CLTCL1-205	ENST00000538828	P4HB	P07237	508 aa	Known RBP	13.84	□□□□□ -0.19
CLTCL1-205	ENST00000538828	QARS	P47897	775 aa	Known RBP	13.84	□□□□□ -0.19
CLTCL1-205	ENST00000538828	PRKCE	Q02156	737 aa		13.84	□□□□□ -0.19
CLTCL1-205	ENST00000538828	GRIN2C	Q14957	1233 aa		13.84	□□□□□ -0.19
CLTCL1-205	ENST00000538828	EPHA7	Q15375	998 aa		13.84	□□□□□ -0.19
CLTCL1-205	ENST00000538828	EARS2	Q5JPH6	523 aa	Known RBP	13.84	□□□□□ -0.19
CLTCL1-205	ENST00000538828	PPP2R2D	Q66LE6	453 aa		13.84	□□□□□ -0.19
CLTCL1-205	ENST00000538828	C4orf19	Q8IY42	314 aa		13.84	□□□□□ -0.19
CLTCL1-205	ENST00000538828	NEK9	Q8TD19	979 aa		13.84	□□□□□ -0.19
CLTCL1-205	ENST00000538828	SP7	Q8TDD2	431 aa	Predicted RBP	13.84	□□□□□ -0.19
CLTCL1-205	ENST00000538828	NKX2-4	Q9H2Z4	354 aa		13.84	□□□□□ -0.19
CLTCL1-205	ENST00000538828	IGKV6-21	A0A0C4DH24	114 aa		13.83	□□□□□ -0.2
CLTCL1-205	ENST00000538828	STBD1	O95210	358 aa		13.83	□□□□□ -0.2
CLTCL1-205	ENST00000538828	LYPLA2	O95372	231 aa		13.83	□□□□□ -0.2
CLTCL1-205	ENST00000538828	GHR	P10912	638 aa		13.83	□□□□□ -0.2
CLTCL1-205	ENST00000538828	U2AF2	P26368	475 aa	Known RBP eCLIP	13.83	□□□□□ -0.2
CLTCL1-205	ENST00000538828	RABGGTB	P53611	331 aa		13.83	□□□□□ -0.2
CLTCL1-205	ENST00000538828	CRYBB1	P53674	252 aa	Predicted RBP	13.83	□□□□□ -0.2
CLTCL1-205	ENST00000538828	DEFB103A	P81534	67 aa		13.83	□□□□□ -0.2
CLTCL1-205	ENST00000538828	SPIRE1	Q08AE8	756 aa		13.83	□□□□□ -0.2
CLTCL1-205	ENST00000538828	TCTN1	Q2MV58	587 aa		13.83	□□□□□ -0.2
CLTCL1-205	ENST00000538828	TRAPPC12	Q8WVT3	735 aa		13.83	□□□□□ -0.2
CLTCL1-205	ENST00000538828	SAMD11	Q96NU1	681 aa		13.83	□□□□□ -0.2
CLTCL1-205	ENST00000538828	MTMR9	Q96QG7	549 aa		13.83	□□□□□ -0.2
CLTCL1-205	ENST00000538828	MAP7D2	Q96T17	732 aa		13.83	□□□□□ -0.2
CLTCL1-205	ENST00000538828	GAS2L1	Q99501	681 aa	Predicted RBP	13.83	□□□□□ -0.2
CLTCL1-205	ENST00000538828	PCDHA12	Q9UN75	941 aa		13.83	□□□□□ -0.2
CLTCL1-205	ENST00000538828	LOC101059915	A0A1B0GWI6	518 aa	Predicted RBP	13.82	□□□□□ -0.2
CLTCL1-205	ENST00000538828	GPR182	O15218	404 aa		13.82	□□□□□ -0.2
CLTCL1-205	ENST00000538828	CHMP2A	O43633	222 aa		13.82	□□□□□ -0.2
CLTCL1-205	ENST00000538828	GAS2	O43903	313 aa	Known RBP	13.82	□□□□□ -0.2
CLTCL1-205	ENST00000538828	MARCH6	O60337	910 aa		13.82	□□□□□ -0.2
CLTCL1-205	ENST00000538828	NEMF	O60524	1076 aa		13.82	□□□□□ -0.2
CLTCL1-205	ENST00000538828	CA3	P07451	260 aa		13.82	□□□□□ -0.2
CLTCL1-205	ENST00000538828	TAP1	Q03518	808 aa		13.82	□□□□□ -0.2
CLTCL1-205	ENST00000538828	TBC1D8B	Q0IIM8	1120 aa		13.82	□□□□□ -0.2
CLTCL1-205	ENST00000538828	CALCRL	Q16602	461 aa		13.82	□□□□□ -0.2
CLTCL1-205	ENST00000538828	UGCG	Q16739	394 aa		13.82	□□□□□ -0.2
CLTCL1-205	ENST00000538828	POTED	Q86YR6	584 aa		13.82	□□□□□ -0.2
CLTCL1-205	ENST00000538828	TMX3	Q96JJ7	454 aa		13.82	□□□□□ -0.2
CLTCL1-205	ENST00000538828	FAM161B	Q96MY7	647 aa		13.82	□□□□□ -0.2
CLTCL1-205	ENST00000538828	CEP89	Q96ST8	783 aa		13.82	□□□□□ -0.2
CLTCL1-205	ENST00000538828	ZBED2	Q9BTP6	218 aa		13.82	□□□□□ -0.2
CLTCL1-205	ENST00000538828	BACH2	Q9BYV9	841 aa		13.82	□□□□□ -0.2
CLTCL1-205	ENST00000538828	FAM49A	Q9H0Q0	323 aa	Predicted RBP	13.82	□□□□□ -0.2
CLTCL1-205	ENST00000538828	TSPYL2	Q9H2G4	693 aa	Predicted RBP	13.82	□□□□□ -0.2
CLTCL1-205	ENST00000538828	LMCD1	Q9NZU5	365 aa		13.82	□□□□□ -0.2
CLTCL1-205	ENST00000538828	LOXHD1	Q8IVV2	1947 aa		13.82	□□□□□ -0.2
CLTCL1-205	ENST00000538828	CDH23	Q9H251	3354 aa		13.81	□□□□□ -0.2
CLTCL1-205	ENST00000538828	EML1	O00423	815 aa		13.81	□□□□□ -0.2
CLTCL1-205	ENST00000538828	ENPP3	O14638	875 aa		13.81	□□□□□ -0.2
CLTCL1-205	ENST00000538828	GPR32	O75388	356 aa		13.81	□□□□□ -0.2
CLTCL1-205	ENST00000538828	XRCC6	P12956	609 aa	Known RBP eCLIP	13.81	□□□□□ -0.2
CLTCL1-205	ENST00000538828	FOSL2	P15408	326 aa		13.81	□□□□□ -0.2
CLTCL1-205	ENST00000538828	ERVK-21	P61565	698 aa		13.81	□□□□□ -0.2
CLTCL1-205	ENST00000538828	PAK2	Q13177	524 aa		13.81	□□□□□ -0.2
CLTCL1-205	ENST00000538828	EFCAB12	Q6NXP0	572 aa		13.81	□□□□□ -0.2
CLTCL1-205	ENST00000538828	LIN28B	Q6ZN17	250 aa	Known RBP eCLIP	13.81	□□□□□ -0.2
CLTCL1-205	ENST00000538828	OTUD6A	Q7L8S5	288 aa		13.81	□□□□□ -0.2
CLTCL1-205	ENST00000538828	NOSTRIN	Q8IVI9	506 aa		13.81	□□□□□ -0.2
CLTCL1-205	ENST00000538828	MYOCD	Q8IZQ8	938 aa		13.81	□□□□□ -0.2
CLTCL1-205	ENST00000538828	MYLIP	Q8WY64	445 aa		13.81	□□□□□ -0.2
CLTCL1-205	ENST00000538828	UIMC1	Q96RL1	719 aa		13.81	□□□□□ -0.2
CLTCL1-205	ENST00000538828	OSBPL7	Q9BZF2	842 aa		13.81	□□□□□ -0.2
CLTCL1-205	ENST00000538828	ZSWIM4	Q9H7M6	989 aa		13.81	□□□□□ -0.2
CLTCL1-205	ENST00000538828	AGO3	Q9H9G7	860 aa	Known RBP	13.81	□□□□□ -0.2
CLTCL1-205	ENST00000538828	PADI3	Q9ULW8	664 aa		13.81	□□□□□ -0.2
CLTCL1-205	ENST00000538828	ZSCAN21	Q9Y5A6	473 aa	Predicted RBP	13.81	□□□□□ -0.2
CLTCL1-205	ENST00000538828	FAM205C	A6NFA0	338 aa		13.8	□□□□□ -0.2
CLTCL1-205	ENST00000538828	MAF	O75444	373 aa	Predicted RBP	13.8	□□□□□ -0.2
CLTCL1-205	ENST00000538828	MYOG	P15173	224 aa		13.8	□□□□□ -0.2
CLTCL1-205	ENST00000538828	MUT	P22033	750 aa		13.8	□□□□□ -0.2
CLTCL1-205	ENST00000538828	DNM2	P50570	870 aa		13.8	□□□□□ -0.2
CLTCL1-205	ENST00000538828	ANO5	Q75V66	913 aa		13.8	□□□□□ -0.2
CLTCL1-205	ENST00000538828	CRIPAK	Q8N1N5	446 aa		13.8	□□□□□ -0.2
CLTCL1-205	ENST00000538828	METTL13	Q8N6R0	699 aa		13.8	□□□□□ -0.2
CLTCL1-205	ENST00000538828	MAFA	Q8NHW3	353 aa	Predicted RBP	13.8	□□□□□ -0.2
CLTCL1-205	ENST00000538828	RSPH1	Q8WYR4	309 aa		13.8	□□□□□ -0.2
CLTCL1-205	ENST00000538828	GJA10	Q969M2	543 aa		13.8	□□□□□ -0.2
CLTCL1-205	ENST00000538828	TGS1	Q96RS0	853 aa	Known RBP	13.8	□□□□□ -0.2

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