RNA–Protein interactions for RNA: ENST00000538696.5

CLN6-202, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 2 BASIC

Gene CLN6, Length 1,343 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-202ENST00000538696 DKC1O60832 514 aaKnown RBP eCLIP19.22■□□□□ 0.67
CLN6-202ENST00000538696 CABYRO75952 493 aa19.22■□□□□ 0.67
CLN6-202ENST00000538696 SLFN14P0C7P3 912 aa19.22■□□□□ 0.67
CLN6-202ENST00000538696 MUTP22033 750 aa19.22■□□□□ 0.67
CLN6-202ENST00000538696 KIAA0753Q2KHM9 967 aa19.22■□□□□ 0.67
CLN6-202ENST00000538696 KCNK18Q7Z418 384 aa19.22■□□□□ 0.67
CLN6-202ENST00000538696 RNF214Q8ND24 703 aa19.22■□□□□ 0.67
CLN6-202ENST00000538696 ATP8B4Q8TF62 1192 aa19.22■□□□□ 0.67
CLN6-202ENST00000538696 PPP1R13LQ8WUF5 828 aa19.22■□□□□ 0.67
CLN6-202ENST00000538696 CALML4Q96GE6 196 aa19.22■□□□□ 0.67
CLN6-202ENST00000538696 RNPEPQ9H4A4 650 aa19.22■□□□□ 0.67
CLN6-202ENST00000538696 KIAA1024Q9UPX6 916 aa19.22■□□□□ 0.67
CLN6-202ENST00000538696 BRCA2P51587 3418 aa19.21■□□□□ 0.67
CLN6-202ENST00000538696 TMEM150BA6NC51 233 aa19.21■□□□□ 0.67
CLN6-202ENST00000538696 PLCG1P19174 1290 aa19.21■□□□□ 0.67
CLN6-202ENST00000538696 MRE11P49959 708 aa19.21■□□□□ 0.67
CLN6-202ENST00000538696 MDM2Q00987 491 aaPredicted RBP19.21■□□□□ 0.67
CLN6-202ENST00000538696 POSTNQ15063 836 aa19.21■□□□□ 0.67
CLN6-202ENST00000538696 XKR3Q5GH77 459 aa19.21■□□□□ 0.67
CLN6-202ENST00000538696 L1TD1Q5T7N2 865 aaKnown RBP19.21■□□□□ 0.67
CLN6-202ENST00000538696 TRMT1LQ7Z2T5 733 aaKnown RBP19.21■□□□□ 0.67
CLN6-202ENST00000538696 SH3RF1Q7Z6J0 888 aa19.21■□□□□ 0.67
CLN6-202ENST00000538696 CEP57L1Q8IYX8 460 aa19.21■□□□□ 0.67
CLN6-202ENST00000538696 IQUBQ8NA54 791 aa19.21■□□□□ 0.67
CLN6-202ENST00000538696 RASSF8Q8NHQ8 419 aa19.21■□□□□ 0.67
CLN6-202ENST00000538696 CDK5RAP3Q96JB5 506 aa19.21■□□□□ 0.67
CLN6-202ENST00000538696 FAM167AQ96KS9 214 aa19.21■□□□□ 0.67
CLN6-202ENST00000538696 PYM1Q9BRP8 204 aaKnown RBP19.21■□□□□ 0.67
CLN6-202ENST00000538696 SEPT9Q9UHD8 586 aaPredicted RBP19.21■□□□□ 0.67
CLN6-202ENST00000538696 ZBTB39O15060 712 aa19.2■□□□□ 0.66
CLN6-202ENST00000538696 CAPN2P17655 700 aa19.2■□□□□ 0.66
CLN6-202ENST00000538696 EN2P19622 333 aaPredicted RBP19.2■□□□□ 0.66
CLN6-202ENST00000538696 YWHABP31946 246 aaKnown RBP19.2■□□□□ 0.66
CLN6-202ENST00000538696 STAT6P42226 847 aa19.2■□□□□ 0.66
CLN6-202ENST00000538696 CHMP4BP1P59074 171 aa19.2■□□□□ 0.66
CLN6-202ENST00000538696 STX1AQ16623 288 aa19.2■□□□□ 0.66
CLN6-202ENST00000538696 NAALADL2Q58DX5 795 aa19.2■□□□□ 0.66
CLN6-202ENST00000538696 PLA2G4FQ68DD2 849 aa19.2■□□□□ 0.66
CLN6-202ENST00000538696 ANO5Q75V66 913 aa19.2■□□□□ 0.66
CLN6-202ENST00000538696 BBXQ8WY36 941 aaPredicted RBP19.2■□□□□ 0.66
CLN6-202ENST00000538696 PAGE5Q96GU1 130 aa19.2■□□□□ 0.66
CLN6-202ENST00000538696 GLT1D1Q96MS3 346 aa19.2■□□□□ 0.66
CLN6-202ENST00000538696 NT5C3AQ9H0P0 336 aa19.2■□□□□ 0.66
CLN6-202ENST00000538696 CCDC39Q9UFE4 941 aa19.2■□□□□ 0.66
CLN6-202ENST00000538696 TUBE1Q9UJT0 475 aa19.2■□□□□ 0.66
CLN6-202ENST00000538696 TRPC6Q9Y210 931 aa19.2■□□□□ 0.66
CLN6-202ENST00000538696 GRIN2DO15399 1336 aa19.2■□□□□ 0.66
CLN6-202ENST00000538696 EVPLQ92817 2033 aa19.19■□□□□ 0.66
CLN6-202ENST00000538696 ALPK3Q96L96 1907 aa19.19■□□□□ 0.66
CLN6-202ENST00000538696 E9PMD0 336 aa19.19■□□□□ 0.66
CLN6-202ENST00000538696 SMIM10L2AP0DMW4 78 aa19.19■□□□□ 0.66
CLN6-202ENST00000538696 SMIM10L2BP0DMW5 78 aa19.19■□□□□ 0.66
CLN6-202ENST00000538696 COL6A1P12109 1028 aa19.19■□□□□ 0.66
CLN6-202ENST00000538696 NBPF20Q3BBV1 942 aa19.19■□□□□ 0.66
CLN6-202ENST00000538696 ANO6Q4KMQ2 910 aa19.19■□□□□ 0.66
CLN6-202ENST00000538696 RRAGBQ5VZM2 374 aa19.19■□□□□ 0.66
CLN6-202ENST00000538696 KANK3Q6NY19 840 aa19.19■□□□□ 0.66
CLN6-202ENST00000538696 TNS4Q8IZW8 715 aa19.19■□□□□ 0.66
CLN6-202ENST00000538696 PIGOQ8TEQ8 1089 aa19.19■□□□□ 0.66
CLN6-202ENST00000538696 NACC1Q96RE7 527 aa19.19■□□□□ 0.66
CLN6-202ENST00000538696 STARD7Q9NQZ5 370 aa19.19■□□□□ 0.66
CLN6-202ENST00000538696 BLOC1S4Q9NUP1 217 aa19.19■□□□□ 0.66
CLN6-202ENST00000538696 HOOK1Q9UJC3 728 aaKnown RBP19.19■□□□□ 0.66
CLN6-202ENST00000538696 ZBTB42B2RXF5 422 aa19.18■□□□□ 0.66
CLN6-202ENST00000538696 BIN1O00499 593 aa19.18■□□□□ 0.66
CLN6-202ENST00000538696 HBP1O60381 514 aa19.18■□□□□ 0.66
CLN6-202ENST00000538696 XRCC6P12956 609 aaKnown RBP eCLIP19.18■□□□□ 0.66
CLN6-202ENST00000538696 AFMP43652 599 aa19.18■□□□□ 0.66
CLN6-202ENST00000538696 ITGA7Q13683 1181 aa19.18■□□□□ 0.66
CLN6-202ENST00000538696 C11orf57Q6ZUT1 292 aaPredicted RBP19.18■□□□□ 0.66
CLN6-202ENST00000538696 STAMQ92783 540 aa19.18■□□□□ 0.66
CLN6-202ENST00000538696 SH2D3AQ9BRG2 576 aa19.18■□□□□ 0.66
CLN6-202ENST00000538696 NIFKQ9BYG3 293 aaKnown RBP19.18■□□□□ 0.66
CLN6-202ENST00000538696 DNAJC25Q9H1X3 360 aa19.18■□□□□ 0.66
CLN6-202ENST00000538696 NRBP2Q9NSY0 501 aa19.18■□□□□ 0.66
CLN6-202ENST00000538696 HDAC6Q9UBN7 1215 aa19.18■□□□□ 0.66
CLN6-202ENST00000538696 PCDHA5Q9Y5H7 936 aa19.18■□□□□ 0.66
CLN6-202ENST00000538696 COL1A2P08123 1366 aa19.18■□□□□ 0.66
CLN6-202ENST00000538696 A0A0U1RQG5 324 aaPredicted RBP19.17■□□□□ 0.66
CLN6-202ENST00000538696 EYA4O95677 639 aa19.17■□□□□ 0.66
CLN6-202ENST00000538696 INSRRP14616 1297 aa19.17■□□□□ 0.66
CLN6-202ENST00000538696 CASP1P29466 404 aa19.17■□□□□ 0.66
CLN6-202ENST00000538696 RARRES1P49788 294 aa19.17■□□□□ 0.66
CLN6-202ENST00000538696 NPEPPSP55786 919 aa19.17■□□□□ 0.66
CLN6-202ENST00000538696 PPFIA1Q13136 1202 aa19.17■□□□□ 0.66
CLN6-202ENST00000538696 HIC1Q14526 733 aa19.17■□□□□ 0.66
CLN6-202ENST00000538696 TARBP2Q15633 366 aaKnown RBP19.17■□□□□ 0.66
CLN6-202ENST00000538696 GRIK4Q16099 956 aa19.17■□□□□ 0.66
CLN6-202ENST00000538696 MTERF2Q49AM1 385 aa19.17■□□□□ 0.66
CLN6-202ENST00000538696 SESTD1Q86VW0 696 aa19.17■□□□□ 0.66
CLN6-202ENST00000538696 KCTD17Q8N5Z5 321 aa19.17■□□□□ 0.66
CLN6-202ENST00000538696 TRAPPC12Q8WVT3 735 aa19.17■□□□□ 0.66
CLN6-202ENST00000538696 RAD54LQ92698 747 aa19.17■□□□□ 0.66
CLN6-202ENST00000538696 VTI1AQ96AJ9 217 aa19.17■□□□□ 0.66
CLN6-202ENST00000538696 CEP89Q96ST8 783 aa19.17■□□□□ 0.66
CLN6-202ENST00000538696 MTRQ99707 1265 aa19.17■□□□□ 0.66
CLN6-202ENST00000538696 C11orf49Q9H6J7 331 aa19.17■□□□□ 0.66
CLN6-202ENST00000538696 ANKEF1Q9NU02 776 aa19.17■□□□□ 0.66
CLN6-202ENST00000538696 ANO10Q9NW15 660 aa19.17■□□□□ 0.66
CLN6-202ENST00000538696 DBR1Q9UK59 544 aaKnown RBP19.17■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms