RNA–Protein interactions for RNA: ENST00000537556.1

SRGAP1-202, Transcript of SLIT-ROBO Rho GTPase activating protein 1, humanhuman

TSL 2

Gene SRGAP1, Length 2,976 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP1-202ENST00000537556 TBC1D10AQ9BXI6 508 aa9.21□□□□□ -0.94
SRGAP1-202ENST00000537556 DENND2DQ9H6A0 471 aaPredicted RBP9.21□□□□□ -0.94
SRGAP1-202ENST00000537556 UBAP1Q9NZ09 502 aa9.21□□□□□ -0.94
SRGAP1-202ENST00000537556 TBC1D30Q9Y2I9 924 aa9.21□□□□□ -0.94
SRGAP1-202ENST00000537556 FADS3Q9Y5Q0 445 aa9.21□□□□□ -0.94
SRGAP1-202ENST00000537556 BHMG1C9JSJ3 638 aaPredicted RBP9.21□□□□□ -0.94
SRGAP1-202ENST00000537556 HNRNPCL1O60812 293 aaKnown RBP9.21□□□□□ -0.94
SRGAP1-202ENST00000537556 EYA4O95677 639 aa9.21□□□□□ -0.94
SRGAP1-202ENST00000537556 HSPD1P10809 573 aaKnown RBP9.21□□□□□ -0.94
SRGAP1-202ENST00000537556 GNAT2P19087 354 aa9.21□□□□□ -0.94
SRGAP1-202ENST00000537556 RNASELQ05823 741 aaKnown RBP9.21□□□□□ -0.94
SRGAP1-202ENST00000537556 ADRM1Q16186 407 aa9.21□□□□□ -0.94
SRGAP1-202ENST00000537556 SPTY2D1Q68D10 685 aaPredicted RBP9.21□□□□□ -0.94
SRGAP1-202ENST00000537556 PHLDB3Q6NSJ2 640 aa9.21□□□□□ -0.94
SRGAP1-202ENST00000537556 TRIM50Q86XT4 487 aa9.21□□□□□ -0.94
SRGAP1-202ENST00000537556 RIBC1Q8N443 379 aaPredicted RBP9.21□□□□□ -0.94
SRGAP1-202ENST00000537556 TTC8Q8TAM2 541 aa9.21□□□□□ -0.94
SRGAP1-202ENST00000537556 WASF1Q92558 559 aa9.21□□□□□ -0.94
SRGAP1-202ENST00000537556 FMO2Q99518 471 aa9.21□□□□□ -0.94
SRGAP1-202ENST00000537556 PYM1Q9BRP8 204 aaKnown RBP9.21□□□□□ -0.94
SRGAP1-202ENST00000537556 DHX36Q9H2U1 1008 aaKnown RBP9.21□□□□□ -0.94
SRGAP1-202ENST00000537556 EPB41L1Q9H4G0 881 aa9.21□□□□□ -0.94
SRGAP1-202ENST00000537556 VPS54Q9P1Q0 977 aa9.21□□□□□ -0.94
SRGAP1-202ENST00000537556 ZNF212Q9UDV6 495 aa9.21□□□□□ -0.94
SRGAP1-202ENST00000537556 UTP11Q9Y3A2 253 aaKnown RBP9.21□□□□□ -0.94
SRGAP1-202ENST00000537556 COBLO75128 1261 aa9.2□□□□□ -0.94
SRGAP1-202ENST00000537556 S100A1P23297 94 aa9.2□□□□□ -0.94
SRGAP1-202ENST00000537556 STIP1P31948 543 aaKnown RBP9.2□□□□□ -0.94
SRGAP1-202ENST00000537556 METAP2P50579 478 aaKnown RBP eCLIP9.2□□□□□ -0.94
SRGAP1-202ENST00000537556 CTDSPL2Q05D32 466 aa9.2□□□□□ -0.94
SRGAP1-202ENST00000537556 RALYLQ86SE5 291 aaKnown RBP9.2□□□□□ -0.94
SRGAP1-202ENST00000537556 C2CD5Q86YS7 1000 aa9.2□□□□□ -0.94
SRGAP1-202ENST00000537556 KBTBD3Q8NAB2 608 aa9.2□□□□□ -0.94
SRGAP1-202ENST00000537556 ATP6V0A1Q93050 837 aa9.2□□□□□ -0.94
SRGAP1-202ENST00000537556 RNF25Q96BH1 459 aaPredicted RBP9.2□□□□□ -0.94
SRGAP1-202ENST00000537556 DGCR14Q96DF8 476 aaKnown RBP9.2□□□□□ -0.94
SRGAP1-202ENST00000537556 MTMR8Q96EF0 704 aa9.2□□□□□ -0.94
SRGAP1-202ENST00000537556 NEUROG2Q9H2A3 272 aa9.2□□□□□ -0.94
SRGAP1-202ENST00000537556 METTL14Q9HCE5 456 aaKnown RBP9.2□□□□□ -0.94
SRGAP1-202ENST00000537556 GPHNQ9NQX3 736 aaPredicted RBP9.2□□□□□ -0.94
SRGAP1-202ENST00000537556 FAIMQ9NVQ4 179 aa9.2□□□□□ -0.94
SRGAP1-202ENST00000537556 MAP3K19Q56UN5 1328 aa9.2□□□□□ -0.94
SRGAP1-202ENST00000537556 CCDC162PA2VCL2 907 aa9.2□□□□□ -0.94
SRGAP1-202ENST00000537556 DAPK3O43293 454 aa9.2□□□□□ -0.94
SRGAP1-202ENST00000537556 BUB1O43683 1085 aa9.2□□□□□ -0.94
SRGAP1-202ENST00000537556 FLT3P36888 993 aa9.2□□□□□ -0.94
SRGAP1-202ENST00000537556 EIF4A3P38919 411 aaKnown RBP9.2□□□□□ -0.94
SRGAP1-202ENST00000537556 HALP42357 657 aa9.2□□□□□ -0.94
SRGAP1-202ENST00000537556 TTLL12Q14166 644 aaPredicted RBP9.2□□□□□ -0.94
SRGAP1-202ENST00000537556 RCN1Q15293 331 aa9.2□□□□□ -0.94
SRGAP1-202ENST00000537556 SH3D19Q5HYK7 790 aa9.2□□□□□ -0.94
SRGAP1-202ENST00000537556 EPHA10Q5JZY3 1008 aa9.2□□□□□ -0.94
SRGAP1-202ENST00000537556 MEI1Q5TIA1 1274 aa9.2□□□□□ -0.94
SRGAP1-202ENST00000537556 CHADLQ6NUI6 762 aa9.2□□□□□ -0.94
SRGAP1-202ENST00000537556 BTNL9Q6UXG8 535 aa9.2□□□□□ -0.94
SRGAP1-202ENST00000537556 B3GNT6Q6ZMB0 384 aa9.2□□□□□ -0.94
SRGAP1-202ENST00000537556 C3orf62Q6ZUJ4 267 aa9.2□□□□□ -0.94
SRGAP1-202ENST00000537556 SCFD2Q8WU76 684 aa9.2□□□□□ -0.94
SRGAP1-202ENST00000537556 SREK1Q8WXA9 508 aaKnown RBP9.2□□□□□ -0.94
SRGAP1-202ENST00000537556 LPIN2Q92539 896 aa9.2□□□□□ -0.94
SRGAP1-202ENST00000537556 STMN2Q93045 179 aa9.2□□□□□ -0.94
SRGAP1-202ENST00000537556 TRIM11Q96F44 468 aa9.2□□□□□ -0.94
SRGAP1-202ENST00000537556 SETDB2Q96T68 719 aa9.2□□□□□ -0.94
SRGAP1-202ENST00000537556 DDX50Q9BQ39 737 aaKnown RBP9.2□□□□□ -0.94
SRGAP1-202ENST00000537556 PABPC3Q9H361 631 aaKnown RBP9.2□□□□□ -0.94
SRGAP1-202ENST00000537556 SLITRK6Q9H5Y7 841 aa9.2□□□□□ -0.94
SRGAP1-202ENST00000537556 DBF4Q9UBU7 674 aaPredicted RBP9.2□□□□□ -0.94
SRGAP1-202ENST00000537556 SAP30BPQ9UHR5 308 aaKnown RBP9.2□□□□□ -0.94
SRGAP1-202ENST00000537556 WDR19Q8NEZ3 1342 aa9.2□□□□□ -0.94
SRGAP1-202ENST00000537556 A6NJR5 290 aa9.19□□□□□ -0.94
SRGAP1-202ENST00000537556 EIF3FO00303 357 aaPredicted RBP9.19□□□□□ -0.94
SRGAP1-202ENST00000537556 TRAFD1O14545 582 aaPredicted RBP9.19□□□□□ -0.94
SRGAP1-202ENST00000537556 CAPN9O14815 690 aa9.19□□□□□ -0.94
SRGAP1-202ENST00000537556 RANBP6O60518 1105 aaKnown RBP9.19□□□□□ -0.94
SRGAP1-202ENST00000537556 PDE5AO76074 875 aa9.19□□□□□ -0.94
SRGAP1-202ENST00000537556 MYL6BP14649 208 aa9.19□□□□□ -0.94
SRGAP1-202ENST00000537556 DNA2P51530 1060 aa9.19□□□□□ -0.94
SRGAP1-202ENST00000537556 PMS2P54278 862 aa9.19□□□□□ -0.94
SRGAP1-202ENST00000537556 RNASE9P60153 205 aaKnown RBP9.19□□□□□ -0.94
SRGAP1-202ENST00000537556 PSMC1P62191 440 aaKnown RBP9.19□□□□□ -0.94
SRGAP1-202ENST00000537556 GIT2Q14161 759 aa9.19□□□□□ -0.94
SRGAP1-202ENST00000537556 GET4Q7L5D6 327 aaPredicted RBP9.19□□□□□ -0.94
SRGAP1-202ENST00000537556 NME9Q86XW9 330 aa9.19□□□□□ -0.94
SRGAP1-202ENST00000537556 IRF2BP1Q8IU81 584 aa9.19□□□□□ -0.94
SRGAP1-202ENST00000537556 NELFCDQ8IXH7 590 aa9.19□□□□□ -0.94
SRGAP1-202ENST00000537556 PEX5LQ8IYB4 626 aa9.19□□□□□ -0.94
SRGAP1-202ENST00000537556 NCOA7Q8NI08 942 aa9.19□□□□□ -0.94
SRGAP1-202ENST00000537556 DYDC2Q96IM9 177 aa9.19□□□□□ -0.94
SRGAP1-202ENST00000537556 TUBGCP2Q9BSJ2 902 aa9.19□□□□□ -0.94
SRGAP1-202ENST00000537556 ZMYND12Q9H0C1 365 aa9.19□□□□□ -0.94
SRGAP1-202ENST00000537556 CCDC113Q9H0I3 377 aa9.19□□□□□ -0.94
SRGAP1-202ENST00000537556 AZI2Q9H6S1 392 aa9.19□□□□□ -0.94
SRGAP1-202ENST00000537556 ARHGAP20Q9P2F6 1191 aa9.19□□□□□ -0.94
SRGAP1-202ENST00000537556 HESX1Q9UBX0 185 aa9.19□□□□□ -0.94
SRGAP1-202ENST00000537556 FRMD4BQ9Y2L6 1034 aa9.19□□□□□ -0.94
SRGAP1-202ENST00000537556 KIDINS220Q9ULH0 1771 aa9.19□□□□□ -0.94
SRGAP1-202ENST00000537556 MAPK13O15264 365 aa9.19□□□□□ -0.94
SRGAP1-202ENST00000537556 TBC1D12O60347 775 aa9.19□□□□□ -0.94
SRGAP1-202ENST00000537556 CBFA2T3O75081 653 aa9.19□□□□□ -0.94
SRGAP1-202ENST00000537556 PALMO75781 387 aa9.19□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 60 ms