RNA–Protein interactions for RNA: ENST00000536634.5

CLIP1-207, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 3

Gene CLIP1, Length 929 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-207ENST00000536634 DSEQ9UL01 958 aa7.84□□□□□ -1.15
CLIP1-207ENST00000536634 CBLCQ9ULV8 474 aa7.84□□□□□ -1.15
CLIP1-207ENST00000536634 WASF3Q9UPY6 502 aa7.84□□□□□ -1.15
CLIP1-207ENST00000536634 PTPRUQ92729 1446 aa7.84□□□□□ -1.15
CLIP1-207ENST00000536634 KANK1Q14678 1352 aa7.84□□□□□ -1.16
CLIP1-207ENST00000536634 NKX3-2P78367 333 aa7.83□□□□□ -1.16
CLIP1-207ENST00000536634 FBLN7Q53RD9 439 aa7.83□□□□□ -1.16
CLIP1-207ENST00000536634 FGD2Q7Z6J4 655 aa7.83□□□□□ -1.16
CLIP1-207ENST00000536634 MARCH10Q8NA82 808 aaPredicted RBP7.83□□□□□ -1.16
CLIP1-207ENST00000536634 DDX17Q92841 729 aaKnown RBP7.83□□□□□ -1.16
CLIP1-207ENST00000536634 FBXW5Q969U6 566 aa7.83□□□□□ -1.16
CLIP1-207ENST00000536634 KCNC2Q96PR1 638 aa7.83□□□□□ -1.16
CLIP1-207ENST00000536634 MRPL4Q9BYD3 311 aaKnown RBP7.83□□□□□ -1.16
CLIP1-207ENST00000536634 TBX22Q9Y458 520 aa7.83□□□□□ -1.16
CLIP1-207ENST00000536634 MST1RQ04912 1400 aa7.83□□□□□ -1.16
CLIP1-207ENST00000536634 PNPLA6Q8IY17 1366 aa7.83□□□□□ -1.16
CLIP1-207ENST00000536634 CCDC163A0A0D9SF12 145 aa7.82□□□□□ -1.16
CLIP1-207ENST00000536634 EFCAB14O75071 495 aa7.82□□□□□ -1.16
CLIP1-207ENST00000536634 DAPK1P53355 1430 aa7.82□□□□□ -1.16
CLIP1-207ENST00000536634 LIPIQ6XZB0 460 aa7.82□□□□□ -1.16
CLIP1-207ENST00000536634 TRIM48Q8IWZ4 208 aa7.82□□□□□ -1.16
CLIP1-207ENST00000536634 SYT8Q8NBV8 401 aa7.82□□□□□ -1.16
CLIP1-207ENST00000536634 TTLL11Q8NHH1 800 aa7.82□□□□□ -1.16
CLIP1-207ENST00000536634 RNPC3Q96LT9 517 aaKnown RBP7.82□□□□□ -1.16
CLIP1-207ENST00000536634 CLUHP3Q96NS8 147 aa7.82□□□□□ -1.16
CLIP1-207ENST00000536634 TRIM39Q9HCM9 518 aa7.82□□□□□ -1.16
CLIP1-207ENST00000536634 CATSPERZQ9NTU4 200 aa7.82□□□□□ -1.16
CLIP1-207ENST00000536634 SLC52A1Q9NWF4 448 aa7.82□□□□□ -1.16
CLIP1-207ENST00000536634 TRPM2O94759 1503 aa7.82□□□□□ -1.16
CLIP1-207ENST00000536634 PTPN23Q9H3S7 1636 aa7.81□□□□□ -1.16
CLIP1-207ENST00000536634 XRN1Q8IZH2 1706 aaKnown RBP7.81□□□□□ -1.16
CLIP1-207ENST00000536634 DCCP43146 1447 aa7.81□□□□□ -1.16
CLIP1-207ENST00000536634 ESYT3A0FGR9 886 aa7.81□□□□□ -1.16
CLIP1-207ENST00000536634 CCDC66A2RUB6 948 aa7.81□□□□□ -1.16
CLIP1-207ENST00000536634 SH3D21A4FU49 640 aa7.81□□□□□ -1.16
CLIP1-207ENST00000536634 AMY2AP04746 511 aa7.81□□□□□ -1.16
CLIP1-207ENST00000536634 CKMP06732 381 aa7.81□□□□□ -1.16
CLIP1-207ENST00000536634 PDE6AP16499 860 aa7.81□□□□□ -1.16
CLIP1-207ENST00000536634 AMY2BP19961 511 aa7.81□□□□□ -1.16
CLIP1-207ENST00000536634 THBS2P35442 1172 aa7.81□□□□□ -1.16
CLIP1-207ENST00000536634 ADAM9Q13443 819 aa7.81□□□□□ -1.16
CLIP1-207ENST00000536634 KCTD1Q719H9 257 aa7.81□□□□□ -1.16
CLIP1-207ENST00000536634 PNPLA5Q7Z6Z6 429 aaPredicted RBP7.81□□□□□ -1.16
CLIP1-207ENST00000536634 PROSER1Q86XN7 944 aa7.81□□□□□ -1.16
CLIP1-207ENST00000536634 ZC3H7AQ8IWR0 971 aaKnown RBP7.81□□□□□ -1.16
CLIP1-207ENST00000536634 KYQ8NBH2 561 aa7.81□□□□□ -1.16
CLIP1-207ENST00000536634 TMEM260Q9NX78 707 aa7.81□□□□□ -1.16
CLIP1-207ENST00000536634 USP35Q9P2H5 1018 aa7.81□□□□□ -1.16
CLIP1-207ENST00000536634 UNC13BO14795 1591 aa7.8□□□□□ -1.16
CLIP1-207ENST00000536634 PPP1R12AO14974 1030 aaPredicted RBP7.8□□□□□ -1.16
CLIP1-207ENST00000536634 KCNQ2O43526 872 aa7.8□□□□□ -1.16
CLIP1-207ENST00000536634 INHBBP09529 407 aa7.8□□□□□ -1.16
CLIP1-207ENST00000536634 NAT1P18440 290 aa7.8□□□□□ -1.16
CLIP1-207ENST00000536634 KRT15P19012 456 aa7.8□□□□□ -1.16
CLIP1-207ENST00000536634 DNM2P50570 870 aa7.8□□□□□ -1.16
CLIP1-207ENST00000536634 EPHA5P54756 1037 aa7.8□□□□□ -1.16
CLIP1-207ENST00000536634 SLURP1P55000 103 aa7.8□□□□□ -1.16
CLIP1-207ENST00000536634 RTP5Q14D33 572 aa7.8□□□□□ -1.16
CLIP1-207ENST00000536634 ABHD17CQ6PCB6 329 aa7.8□□□□□ -1.16
CLIP1-207ENST00000536634 TMC5Q6UXY8 1006 aa7.8□□□□□ -1.16
CLIP1-207ENST00000536634 ARHGAP36Q6ZRI8 547 aa7.8□□□□□ -1.16
CLIP1-207ENST00000536634 C16orf59Q7L2K0 433 aa7.8□□□□□ -1.16
CLIP1-207ENST00000536634 OSTM1Q86WC4 334 aa7.8□□□□□ -1.16
CLIP1-207ENST00000536634 PTRH1Q86Y79 214 aaKnown RBP7.8□□□□□ -1.16
CLIP1-207ENST00000536634 ZSWIM3Q96MP5 696 aa7.8□□□□□ -1.16
CLIP1-207ENST00000536634 NGRNQ9NPE2 291 aaKnown RBP7.8□□□□□ -1.16
CLIP1-207ENST00000536634 COQ6Q9Y2Z9 468 aa7.8□□□□□ -1.16
CLIP1-207ENST00000536634 NRXN3Q9Y4C0 1643 aa7.8□□□□□ -1.16
CLIP1-207ENST00000536634 PIK3R4Q99570 1358 aa7.8□□□□□ -1.16
CLIP1-207ENST00000536634 RPRD2Q5VT52 1461 aaKnown RBP7.8□□□□□ -1.16
CLIP1-207ENST00000536634 NALCNQ8IZF0 1738 aa7.79□□□□□ -1.16
CLIP1-207ENST00000536634 TCRBV16S1A1N1A0A5B0 115 aa7.79□□□□□ -1.16
CLIP1-207ENST00000536634 MAN2B1O00754 1011 aa7.79□□□□□ -1.16
CLIP1-207ENST00000536634 PLD2O14939 933 aa7.79□□□□□ -1.16
CLIP1-207ENST00000536634 FAHP16930 419 aa7.79□□□□□ -1.16
CLIP1-207ENST00000536634 JAM2P57087 298 aa7.79□□□□□ -1.16
CLIP1-207ENST00000536634 ST5P78524 1137 aa7.79□□□□□ -1.16
CLIP1-207ENST00000536634 GPR19Q15760 415 aa7.79□□□□□ -1.16
CLIP1-207ENST00000536634 PAN2Q504Q3 1202 aaKnown RBP7.79□□□□□ -1.16
CLIP1-207ENST00000536634 CARFQ8N187 725 aa7.79□□□□□ -1.16
CLIP1-207ENST00000536634 CISD2Q8N5K1 135 aaKnown RBP7.79□□□□□ -1.16
CLIP1-207ENST00000536634 FEZF2Q8TBJ5 459 aa7.79□□□□□ -1.16
CLIP1-207ENST00000536634 MAGEB10Q96LZ2 347 aaPredicted RBP7.79□□□□□ -1.16
CLIP1-207ENST00000536634 SPATA25Q9BR10 227 aa7.79□□□□□ -1.16
CLIP1-207ENST00000536634 PDGFDQ9GZP0 370 aaPredicted RBP7.79□□□□□ -1.16
CLIP1-207ENST00000536634 ZCCHC4Q9H5U6 513 aa7.79□□□□□ -1.16
CLIP1-207ENST00000536634 PCDH18Q9HCL0 1135 aa7.79□□□□□ -1.16
CLIP1-207ENST00000536634 PARD6AQ9NPB6 346 aa7.79□□□□□ -1.16
CLIP1-207ENST00000536634 HSPBP1Q9NZL4 362 aa7.79□□□□□ -1.16
CLIP1-207ENST00000536634 SRPK3Q9UPE1 567 aa7.79□□□□□ -1.16
CLIP1-207ENST00000536634 ATRNO75882 1429 aa7.78□□□□□ -1.16
CLIP1-207ENST00000536634 ZNF561-AS1K7EIQ3 104 aa7.78□□□□□ -1.16
CLIP1-207ENST00000536634 ACOT7O00154 380 aa7.78□□□□□ -1.16
CLIP1-207ENST00000536634 KCNK3O14649 394 aa7.78□□□□□ -1.16
CLIP1-207ENST00000536634 SMARCA5O60264 1052 aaPredicted RBP7.78□□□□□ -1.16
CLIP1-207ENST00000536634 PRR31Q5SQ13 230 aa7.78□□□□□ -1.16
CLIP1-207ENST00000536634 TTLL6Q8N841 843 aa7.78□□□□□ -1.16
CLIP1-207ENST00000536634 LRRC59Q96AG4 307 aaKnown RBP7.78□□□□□ -1.16
CLIP1-207ENST00000536634 SMURF1Q9HCE7 757 aa7.78□□□□□ -1.16
CLIP1-207ENST00000536634 LUC7LQ9NQ29 371 aaKnown RBP7.78□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms