RNA–Protein interactions for RNA: ENST00000535659.6

CNN1-202, Transcript of calponin 1, humanhuman

TSL 2 BASIC

Gene CNN1, Length 1,527 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNN1-202ENST00000535659 NFRKBQ6P4R8 1299 aa17.38■□□□□ 0.37
CNN1-202ENST00000535659 PAWRQ96IZ0 340 aaKnown RBP17.38■□□□□ 0.37
CNN1-202ENST00000535659 CEP170P1Q96L14 293 aa17.38■□□□□ 0.37
CNN1-202ENST00000535659 SEZ6LQ9BYH1 1024 aa17.38■□□□□ 0.37
CNN1-202ENST00000535659 CYP26B1Q9NR63 512 aa17.38■□□□□ 0.37
CNN1-202ENST00000535659 BLOC1S4Q9NUP1 217 aa17.38■□□□□ 0.37
CNN1-202ENST00000535659 SETD4Q9NVD3 440 aa17.38■□□□□ 0.37
CNN1-202ENST00000535659 HDAC6Q9UBN7 1215 aa17.38■□□□□ 0.37
CNN1-202ENST00000535659 STK17AQ9UEE5 414 aa17.38■□□□□ 0.37
CNN1-202ENST00000535659 NRCAMQ92823 1304 aa17.38■□□□□ 0.37
CNN1-202ENST00000535659 RRN3P2A6NIE6 340 aa17.37■□□□□ 0.37
CNN1-202ENST00000535659 RARRES1P49788 294 aa17.37■□□□□ 0.37
CNN1-202ENST00000535659 PTPN11Q06124 597 aaPredicted RBP17.37■□□□□ 0.37
CNN1-202ENST00000535659 PPFIA1Q13136 1202 aa17.37■□□□□ 0.37
CNN1-202ENST00000535659 TARBP2Q15633 366 aaKnown RBP17.37■□□□□ 0.37
CNN1-202ENST00000535659 E2F4Q16254 413 aa17.37■□□□□ 0.37
CNN1-202ENST00000535659 NAALADL2Q58DX5 795 aa17.37■□□□□ 0.37
CNN1-202ENST00000535659 PLA2G4FQ68DD2 849 aa17.37■□□□□ 0.37
CNN1-202ENST00000535659 SLC43A3Q8NBI5 491 aa17.37■□□□□ 0.37
CNN1-202ENST00000535659 ENGASEQ8NFI3 743 aa17.37■□□□□ 0.37
CNN1-202ENST00000535659 DIS3LQ8TF46 1054 aaKnown RBP17.37■□□□□ 0.37
CNN1-202ENST00000535659 LRRC15Q8TF66 581 aa17.37■□□□□ 0.37
CNN1-202ENST00000535659 PPP1R13LQ8WUF5 828 aa17.37■□□□□ 0.37
CNN1-202ENST00000535659 RAD54LQ92698 747 aa17.37■□□□□ 0.37
CNN1-202ENST00000535659 DHX58Q96C10 678 aa17.37■□□□□ 0.37
CNN1-202ENST00000535659 SH2D3AQ9BRG2 576 aa17.37■□□□□ 0.37
CNN1-202ENST00000535659 BHMT2Q9H2M3 363 aa17.37■□□□□ 0.37
CNN1-202ENST00000535659 DNAH12Q6ZR08 3092 aa17.37■□□□□ 0.37
CNN1-202ENST00000535659 A0A0U1RQG5 324 aaPredicted RBP17.37■□□□□ 0.37
CNN1-202ENST00000535659 ZBTB42B2RXF5 422 aa17.37■□□□□ 0.37
CNN1-202ENST00000535659 ARVCFO00192 962 aa17.37■□□□□ 0.37
CNN1-202ENST00000535659 ZNF202O95125 648 aa17.37■□□□□ 0.37
CNN1-202ENST00000535659 PLA2G4BP0C869 781 aa17.37■□□□□ 0.37
CNN1-202ENST00000535659 GNAT1P11488 350 aa17.37■□□□□ 0.37
CNN1-202ENST00000535659 FAM160A1Q05DH4 1040 aa17.37■□□□□ 0.37
CNN1-202ENST00000535659 GRIK4Q16099 956 aa17.37■□□□□ 0.37
CNN1-202ENST00000535659 MTERF2Q49AM1 385 aa17.37■□□□□ 0.37
CNN1-202ENST00000535659 NECAB2Q7Z6G3 386 aa17.37■□□□□ 0.37
CNN1-202ENST00000535659 SESTD1Q86VW0 696 aa17.37■□□□□ 0.37
CNN1-202ENST00000535659 FMR1NBQ8N0W7 255 aaPredicted RBP17.37■□□□□ 0.37
CNN1-202ENST00000535659 SYT2Q8N9I0 419 aaPredicted RBP17.37■□□□□ 0.37
CNN1-202ENST00000535659 CEP89Q96ST8 783 aa17.37■□□□□ 0.37
CNN1-202ENST00000535659 CUEDC2Q9H467 287 aa17.37■□□□□ 0.37
CNN1-202ENST00000535659 C11orf49Q9H6J7 331 aa17.37■□□□□ 0.37
CNN1-202ENST00000535659 USP25Q9UHP3 1055 aa17.37■□□□□ 0.37
CNN1-202ENST00000535659 PPME1Q9Y570 386 aa17.37■□□□□ 0.37
CNN1-202ENST00000535659 COL1A2P08123 1366 aa17.36■□□□□ 0.37
CNN1-202ENST00000535659 MYH9P35579 1960 aaKnown RBP17.36■□□□□ 0.37
CNN1-202ENST00000535659 KIAA0100Q14667 2235 aaKnown RBP17.36■□□□□ 0.37
CNN1-202ENST00000535659 C17orf102A2RUQ5 167 aa17.36■□□□□ 0.37
CNN1-202ENST00000535659 ARHGEF35A5YM69 484 aa17.36■□□□□ 0.37
CNN1-202ENST00000535659 LIG1P18858 919 aa17.36■□□□□ 0.37
CNN1-202ENST00000535659 CDK7P50613 346 aa17.36■□□□□ 0.37
CNN1-202ENST00000535659 IGBP1P78318 339 aa17.36■□□□□ 0.37
CNN1-202ENST00000535659 SNW1Q13573 536 aaKnown RBP17.36■□□□□ 0.37
CNN1-202ENST00000535659 MCM6Q14566 821 aa17.36■□□□□ 0.37
CNN1-202ENST00000535659 LONRF3Q496Y0 759 aa17.36■□□□□ 0.37
CNN1-202ENST00000535659 FAM47CQ5HY64 1035 aa17.36■□□□□ 0.37
CNN1-202ENST00000535659 SLC39A5Q6ZMH5 540 aa17.36■□□□□ 0.37
CNN1-202ENST00000535659 SV2BQ7L1I2 683 aa17.36■□□□□ 0.37
CNN1-202ENST00000535659 EXOC8Q8IYI6 725 aa17.36■□□□□ 0.37
CNN1-202ENST00000535659 LARP4BQ92615 738 aaKnown RBP17.36■□□□□ 0.37
CNN1-202ENST00000535659 CCDC43Q96MW1 224 aaKnown RBP17.36■□□□□ 0.37
CNN1-202ENST00000535659 GTF2IRD1Q9UHL9 959 aa17.36■□□□□ 0.37
CNN1-202ENST00000535659 SERTAD1Q9UHV2 236 aa17.36■□□□□ 0.37
CNN1-202ENST00000535659 SSBP05455 408 aaKnown RBP eCLIP17.35■□□□□ 0.37
CNN1-202ENST00000535659 SLFN14P0C7P3 912 aa17.35■□□□□ 0.37
CNN1-202ENST00000535659 KLRC1P26715 233 aa17.35■□□□□ 0.37
CNN1-202ENST00000535659 HOXC8P31273 242 aa17.35■□□□□ 0.37
CNN1-202ENST00000535659 SLC12A3P55017 1021 aa17.35■□□□□ 0.37
CNN1-202ENST00000535659 ADAM17P78536 824 aa17.35■□□□□ 0.37
CNN1-202ENST00000535659 HIC1Q14526 733 aa17.35■□□□□ 0.37
CNN1-202ENST00000535659 DHX8Q14562 1220 aaKnown RBP17.35■□□□□ 0.37
CNN1-202ENST00000535659 MARCH8Q5T0T0 291 aa17.35■□□□□ 0.37
CNN1-202ENST00000535659 PADI6Q6TGC4 694 aa17.35■□□□□ 0.37
CNN1-202ENST00000535659 LMBR1Q8WVP7 490 aa17.35■□□□□ 0.37
CNN1-202ENST00000535659 TRAPPC12Q8WVT3 735 aa17.35■□□□□ 0.37
CNN1-202ENST00000535659 WDR81Q562E7 1941 aa17.34■□□□□ 0.37
CNN1-202ENST00000535659 MAGEB2O15479 319 aa17.34■□□□□ 0.37
CNN1-202ENST00000535659 MAFO75444 373 aaPredicted RBP17.34■□□□□ 0.37
CNN1-202ENST00000535659 DGAT1O75907 488 aa17.34■□□□□ 0.37
CNN1-202ENST00000535659 RFC5P40937 340 aa17.34■□□□□ 0.37
CNN1-202ENST00000535659 TBC1D8BQ0IIM8 1120 aa17.34■□□□□ 0.37
CNN1-202ENST00000535659 GDF6Q6KF10 455 aaPredicted RBP17.34■□□□□ 0.37
CNN1-202ENST00000535659 RINT1Q6NUQ1 792 aa17.34■□□□□ 0.37
CNN1-202ENST00000535659 MTHFD1LQ6UB35 978 aa17.34■□□□□ 0.37
CNN1-202ENST00000535659 UBE2Q1Q7Z7E8 422 aa17.34■□□□□ 0.37
CNN1-202ENST00000535659 CEP57L1Q8IYX8 460 aa17.34■□□□□ 0.37
CNN1-202ENST00000535659 SCN10AQ9Y5Y9 1956 aa17.34■□□□□ 0.37
CNN1-202ENST00000535659 ACTN4O43707 911 aaKnown RBP17.33■□□□□ 0.37
CNN1-202ENST00000535659 NR1I2O75469 434 aa17.33■□□□□ 0.37
CNN1-202ENST00000535659 ATN1P54259 1190 aaPredicted RBP17.33■□□□□ 0.37
CNN1-202ENST00000535659 ZNF200P98182 395 aaPredicted RBP17.33■□□□□ 0.37
CNN1-202ENST00000535659 C1orf53Q5VUE5 145 aa17.33■□□□□ 0.37
CNN1-202ENST00000535659 KRBA2Q6ZNG9 492 aa17.33■□□□□ 0.37
CNN1-202ENST00000535659 C1orf186Q6ZWK4 172 aa17.33■□□□□ 0.37
CNN1-202ENST00000535659 CNNM3Q8NE01 707 aa17.33■□□□□ 0.37
CNN1-202ENST00000535659 SLC7A3Q8WY07 619 aa17.33■□□□□ 0.37
CNN1-202ENST00000535659 TIGD1Q96MW7 591 aa17.33■□□□□ 0.37
CNN1-202ENST00000535659 DHX33Q9H6R0 707 aaKnown RBP17.33■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms