RNA–Protein interactions for RNA: ENST00000535544.1

LINC00943-203, long intergenic non-protein coding RNA 943, humanhuman

TSL 2 BASIC

Gene LINC00943, Length 2,815 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00943-203ENST00000535544 TRIM49P0CI25 452 aa10.1□□□□□ -0.79
LINC00943-203ENST00000535544 TRIM49CP0CI26 452 aa10.1□□□□□ -0.79
LINC00943-203ENST00000535544 DLG4P78352 724 aa10.1□□□□□ -0.79
LINC00943-203ENST00000535544 PDCL2Q8N4E4 241 aa10.1□□□□□ -0.79
LINC00943-203ENST00000535544 ELP3Q9H9T3 547 aa10.1□□□□□ -0.79
LINC00943-203ENST00000535544 PARVGQ9HBI0 331 aa10.1□□□□□ -0.79
LINC00943-203ENST00000535544 TRAF3IP3Q9Y228 551 aa10.1□□□□□ -0.79
LINC00943-203ENST00000535544 PAPPA2Q9BXP8 1791 aa10.1□□□□□ -0.79
LINC00943-203ENST00000535544 LCTP09848 1927 aa10.09□□□□□ -0.79
LINC00943-203ENST00000535544 CETN3O15182 167 aa10.09□□□□□ -0.79
LINC00943-203ENST00000535544 POTEJP0CG39 1038 aa10.09□□□□□ -0.79
LINC00943-203ENST00000535544 ZSCAN20P17040 1043 aaPredicted RBP10.09□□□□□ -0.79
LINC00943-203ENST00000535544 RARRES1P49788 294 aa10.09□□□□□ -0.79
LINC00943-203ENST00000535544 TRIM14Q14142 442 aa10.09□□□□□ -0.79
LINC00943-203ENST00000535544 CCDC122Q5T0U0 273 aa10.09□□□□□ -0.79
LINC00943-203ENST00000535544 ANO5Q75V66 913 aa10.09□□□□□ -0.79
LINC00943-203ENST00000535544 VSIG10LQ86VR7 867 aa10.09□□□□□ -0.79
LINC00943-203ENST00000535544 MCF2L2Q86YR7 1114 aa10.09□□□□□ -0.79
LINC00943-203ENST00000535544 APOBEC3FQ8IUX4 373 aaKnown RBP10.09□□□□□ -0.79
LINC00943-203ENST00000535544 DRC1Q96MC2 740 aa10.09□□□□□ -0.79
LINC00943-203ENST00000535544 CYP39A1Q9NYL5 469 aa10.09□□□□□ -0.79
LINC00943-203ENST00000535544 ARHGEF35A5YM69 484 aa10.09□□□□□ -0.79
LINC00943-203ENST00000535544 KIF2AO00139 706 aaPredicted RBP10.09□□□□□ -0.79
LINC00943-203ENST00000535544 ZNF185O15231 689 aa10.09□□□□□ -0.79
LINC00943-203ENST00000535544 ATP1A1P05023 1023 aaKnown RBP10.09□□□□□ -0.79
LINC00943-203ENST00000535544 YWHABP31946 246 aaKnown RBP10.09□□□□□ -0.79
LINC00943-203ENST00000535544 PPP1R2P41236 205 aa10.09□□□□□ -0.79
LINC00943-203ENST00000535544 USP14P54578 494 aa10.09□□□□□ -0.79
LINC00943-203ENST00000535544 FAM178BQ8IXR5 827 aa10.09□□□□□ -0.79
LINC00943-203ENST00000535544 FAM133AQ8N9E0 248 aa10.09□□□□□ -0.79
LINC00943-203ENST00000535544 RBM46Q8TBY0 533 aaKnown RBP10.09□□□□□ -0.79
LINC00943-203ENST00000535544 OTUD5Q96G74 571 aa10.09□□□□□ -0.79
LINC00943-203ENST00000535544 ERO1AQ96HE7 468 aa10.09□□□□□ -0.79
LINC00943-203ENST00000535544 RIT2Q99578 217 aa10.09□□□□□ -0.79
LINC00943-203ENST00000535544 PACSIN1Q9BY11 444 aa10.09□□□□□ -0.79
LINC00943-203ENST00000535544 ZNF446Q9NWS9 450 aa10.09□□□□□ -0.79
LINC00943-203ENST00000535544 ADAMTS5Q9UNA0 930 aa10.09□□□□□ -0.79
LINC00943-203ENST00000535544 MCM3APO60318 1980 aa10.09□□□□□ -0.79
LINC00943-203ENST00000535544 PTPRFP10586 1907 aa10.08□□□□□ -0.8
LINC00943-203ENST00000535544 CCP110O43303 1012 aa10.08□□□□□ -0.8
LINC00943-203ENST00000535544 TADA3O75528 432 aa10.08□□□□□ -0.8
LINC00943-203ENST00000535544 ECM2O94769 699 aaPredicted RBP10.08□□□□□ -0.8
LINC00943-203ENST00000535544 P4HBP07237 508 aaKnown RBP10.08□□□□□ -0.8
LINC00943-203ENST00000535544 SETQ01105 290 aaPredicted RBP10.08□□□□□ -0.8
LINC00943-203ENST00000535544 PTPROQ16827 1216 aa10.08□□□□□ -0.8
LINC00943-203ENST00000535544 CBWD6Q4V339 395 aa10.08□□□□□ -0.8
LINC00943-203ENST00000535544 CBWD3Q5JTY5 395 aa10.08□□□□□ -0.8
LINC00943-203ENST00000535544 CBWD5Q5RIA9 395 aa10.08□□□□□ -0.8
LINC00943-203ENST00000535544 C9orf131Q5VYM1 1079 aa10.08□□□□□ -0.8
LINC00943-203ENST00000535544 CACNA2D4Q7Z3S7 1137 aa10.08□□□□□ -0.8
LINC00943-203ENST00000535544 ZC3H3Q8IXZ2 948 aaKnown RBP10.08□□□□□ -0.8
LINC00943-203ENST00000535544 NEK11Q8NG66 645 aa10.08□□□□□ -0.8
LINC00943-203ENST00000535544 SLC35C1Q96A29 364 aa10.08□□□□□ -0.8
LINC00943-203ENST00000535544 BORCS6Q96GS4 357 aa10.08□□□□□ -0.8
LINC00943-203ENST00000535544 PSMB7Q99436 277 aa10.08□□□□□ -0.8
LINC00943-203ENST00000535544 SMARCAL1Q9NZC9 954 aa10.08□□□□□ -0.8
LINC00943-203ENST00000535544 FHOD1Q9Y613 1164 aa10.08□□□□□ -0.8
LINC00943-203ENST00000535544 FRMPD4Q14CM0 1322 aa10.08□□□□□ -0.8
LINC00943-203ENST00000535544 DICER1Q9UPY3 1922 aaKnown RBP10.08□□□□□ -0.8
LINC00943-203ENST00000535544 GOLGA8IPA6NC78 632 aa10.08□□□□□ -0.8
LINC00943-203ENST00000535544 GOLGA8JA6NMD2 632 aa10.08□□□□□ -0.8
LINC00943-203ENST00000535544 PDXKO00764 312 aa10.08□□□□□ -0.8
LINC00943-203ENST00000535544 SLC16A4O15374 487 aa10.08□□□□□ -0.8
LINC00943-203ENST00000535544 KIF5CO60282 957 aa10.08□□□□□ -0.8
LINC00943-203ENST00000535544 QARSP47897 775 aaKnown RBP10.08□□□□□ -0.8
LINC00943-203ENST00000535544 KIF11P52732 1056 aa10.08□□□□□ -0.8
LINC00943-203ENST00000535544 MRPS25P82663 173 aaKnown RBP10.08□□□□□ -0.8
LINC00943-203ENST00000535544 PPP2R3AQ06190 1150 aa10.08□□□□□ -0.8
LINC00943-203ENST00000535544 TSR1Q2NL82 804 aaKnown RBP10.08□□□□□ -0.8
LINC00943-203ENST00000535544 Q3C1V9 767 aa10.08□□□□□ -0.8
LINC00943-203ENST00000535544 SWSAP1Q6NVH7 229 aa10.08□□□□□ -0.8
LINC00943-203ENST00000535544 PDXDC1Q6P996 788 aa10.08□□□□□ -0.8
LINC00943-203ENST00000535544 BSNDQ8WZ55 320 aa10.08□□□□□ -0.8
LINC00943-203ENST00000535544 CCDC42Q96M95 316 aa10.08□□□□□ -0.8
LINC00943-203ENST00000535544 CBWD1Q9BRT8 395 aa10.08□□□□□ -0.8
LINC00943-203ENST00000535544 PAGR1Q9BTK6 254 aa10.08□□□□□ -0.8
LINC00943-203ENST00000535544 SPON1Q9HCB6 807 aa10.08□□□□□ -0.8
LINC00943-203ENST00000535544 TXNRD2Q9NNW7 524 aa10.08□□□□□ -0.8
LINC00943-203ENST00000535544 OLFML3Q9NRN5 406 aa10.08□□□□□ -0.8
LINC00943-203ENST00000535544 ARMCX3Q9UH62 379 aaPredicted RBP10.08□□□□□ -0.8
LINC00943-203ENST00000535544 CAPN6Q9Y6Q1 641 aa10.08□□□□□ -0.8
LINC00943-203ENST00000535544 MYH9P35579 1960 aaKnown RBP10.08□□□□□ -0.8
LINC00943-203ENST00000535544 SEC31AO94979 1220 aaKnown RBP10.07□□□□□ -0.8
LINC00943-203ENST00000535544 BCRP11274 1271 aa10.07□□□□□ -0.8
LINC00943-203ENST00000535544 PON1P27169 355 aa10.07□□□□□ -0.8
LINC00943-203ENST00000535544 ZNF131P52739 623 aa10.07□□□□□ -0.8
LINC00943-203ENST00000535544 PEX3P56589 373 aa10.07□□□□□ -0.8
LINC00943-203ENST00000535544 GHRHRQ02643 423 aa10.07□□□□□ -0.8
LINC00943-203ENST00000535544 TRAF1Q13077 416 aa10.07□□□□□ -0.8
LINC00943-203ENST00000535544 EDRF1Q3B7T1 1238 aa10.07□□□□□ -0.8
LINC00943-203ENST00000535544 TEX35Q5T0J7 233 aa10.07□□□□□ -0.8
LINC00943-203ENST00000535544 GADL1Q6ZQY3 521 aa10.07□□□□□ -0.8
LINC00943-203ENST00000535544 CCDC60Q8IWA6 550 aaPredicted RBP10.07□□□□□ -0.8
LINC00943-203ENST00000535544 CEP63Q96MT8 703 aa10.07□□□□□ -0.8
LINC00943-203ENST00000535544 NUP58Q9BVL2 599 aa10.07□□□□□ -0.8
LINC00943-203ENST00000535544 EHMT1Q9H9B1 1298 aa10.07□□□□□ -0.8
LINC00943-203ENST00000535544 TYW1Q9NV66 732 aaKnown RBP10.07□□□□□ -0.8
LINC00943-203ENST00000535544 EHD2Q9NZN4 543 aa10.07□□□□□ -0.8
LINC00943-203ENST00000535544 GABBR1Q9UBS5 961 aa10.07□□□□□ -0.8
LINC00943-203ENST00000535544 ADAMTS1Q9UHI8 967 aa10.07□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms