RNA–Protein interactions for RNA: ENST00000535222.5

CPSF7-214, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 3

Gene CPSF7, Length 940 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-214ENST00000535222 MSRB2Q9Y3D2 182 aa8.84□□□□□ -0.99
CPSF7-214ENST00000535222 NEUROG3Q9Y4Z2 214 aa8.84□□□□□ -0.99
CPSF7-214ENST00000535222 GREB1Q4ZG55 1949 aa8.84□□□□□ -1
CPSF7-214ENST00000535222 FRMPD2Q68DX3 1309 aaPredicted RBP8.83□□□□□ -1
CPSF7-214ENST00000535222 WDR19Q8NEZ3 1342 aa8.83□□□□□ -1
CPSF7-214ENST00000535222 TBKBP1A7MCY6 615 aa8.83□□□□□ -1
CPSF7-214ENST00000535222 MBD4O95243 580 aa8.83□□□□□ -1
CPSF7-214ENST00000535222 TOP3BO95985 862 aaKnown RBP8.83□□□□□ -1
CPSF7-214ENST00000535222 LGALS2P05162 132 aa8.83□□□□□ -1
CPSF7-214ENST00000535222 TGFB3P10600 412 aa8.83□□□□□ -1
CPSF7-214ENST00000535222 PLA2G2AP14555 144 aa8.83□□□□□ -1
CPSF7-214ENST00000535222 CD52P31358 61 aa8.83□□□□□ -1
CPSF7-214ENST00000535222 CNR2P34972 360 aa8.83□□□□□ -1
CPSF7-214ENST00000535222 NOVP48745 357 aa8.83□□□□□ -1
CPSF7-214ENST00000535222 RARSP54136 660 aaKnown RBP8.83□□□□□ -1
CPSF7-214ENST00000535222 FOXC1Q12948 553 aa8.83□□□□□ -1
CPSF7-214ENST00000535222 IKQ13123 557 aaPredicted RBP8.83□□□□□ -1
CPSF7-214ENST00000535222 GIT2Q14161 759 aa8.83□□□□□ -1
CPSF7-214ENST00000535222 POLA2Q14181 598 aa8.83□□□□□ -1
CPSF7-214ENST00000535222 LPAL2Q16609 132 aa8.83□□□□□ -1
CPSF7-214ENST00000535222 ALDH1L2Q3SY69 923 aa8.83□□□□□ -1
CPSF7-214ENST00000535222 KCNV1Q6PIU1 500 aa8.83□□□□□ -1
CPSF7-214ENST00000535222 KCTD1Q719H9 257 aa8.83□□□□□ -1
CPSF7-214ENST00000535222 CABP7Q86V35 215 aa8.83□□□□□ -1
CPSF7-214ENST00000535222 LMBR1Q8WVP7 490 aa8.83□□□□□ -1
CPSF7-214ENST00000535222 USP26Q9BXU7 913 aa8.83□□□□□ -1
CPSF7-214ENST00000535222 TMX1Q9H3N1 280 aa8.83□□□□□ -1
CPSF7-214ENST00000535222 PRKRIP1Q9H875 184 aaPredicted RBP8.83□□□□□ -1
CPSF7-214ENST00000535222 WDR6Q9NNW5 1121 aaKnown RBP8.83□□□□□ -1
CPSF7-214ENST00000535222 LTB4R2Q9NPC1 389 aa8.83□□□□□ -1
CPSF7-214ENST00000535222 HCSTQ9UBK5 93 aa8.83□□□□□ -1
CPSF7-214ENST00000535222 PCDHB7Q9Y5E2 793 aa8.83□□□□□ -1
CPSF7-214ENST00000535222 PCNX2A6NKB5 2137 aa8.83□□□□□ -1
CPSF7-214ENST00000535222 UBR5O95071 2799 aaPredicted RBP8.82□□□□□ -1
CPSF7-214ENST00000535222 MBLAC1A4D2B0 266 aaPredicted RBP8.82□□□□□ -1
CPSF7-214ENST00000535222 EIF4E1BA6NMX2 242 aaKnown RBP8.82□□□□□ -1
CPSF7-214ENST00000535222 HRO43593 1189 aa8.82□□□□□ -1
CPSF7-214ENST00000535222 RPLP2P05387 115 aaKnown RBP8.82□□□□□ -1
CPSF7-214ENST00000535222 PDE4AP27815 886 aa8.82□□□□□ -1
CPSF7-214ENST00000535222 ADD2P35612 726 aa8.82□□□□□ -1
CPSF7-214ENST00000535222 FAM189BP81408 668 aa8.82□□□□□ -1
CPSF7-214ENST00000535222 TROAPQ12815 778 aa8.82□□□□□ -1
CPSF7-214ENST00000535222 HTR4Q13639 388 aa8.82□□□□□ -1
CPSF7-214ENST00000535222 WTAPQ15007 396 aa8.82□□□□□ -1
CPSF7-214ENST00000535222 AASDHQ4L235 1098 aaPredicted RBP8.82□□□□□ -1
CPSF7-214ENST00000535222 ZBTB41Q5SVQ8 909 aa8.82□□□□□ -1
CPSF7-214ENST00000535222 SPOUT1Q5T280 376 aaKnown RBP8.82□□□□□ -1
CPSF7-214ENST00000535222 FAM102BQ5T8I3 360 aa8.82□□□□□ -1
CPSF7-214ENST00000535222 GIMAP6Q6P9H5 292 aa8.82□□□□□ -1
CPSF7-214ENST00000535222 KCNT2Q6UVM3 1135 aa8.82□□□□□ -1
CPSF7-214ENST00000535222 LRRC55Q6ZSA7 311 aa8.82□□□□□ -1
CPSF7-214ENST00000535222 ZNF444Q8N0Y2 327 aaPredicted RBP8.82□□□□□ -1
CPSF7-214ENST00000535222 ZNF687Q8N1G0 1237 aa8.82□□□□□ -1
CPSF7-214ENST00000535222 CCER1Q8TC90 406 aaPredicted RBP8.82□□□□□ -1
CPSF7-214ENST00000535222 BBXQ8WY36 941 aaPredicted RBP8.82□□□□□ -1
CPSF7-214ENST00000535222 DDRGK1Q96HY6 314 aa8.82□□□□□ -1
CPSF7-214ENST00000535222 IER2Q9BTL4 223 aa8.82□□□□□ -1
CPSF7-214ENST00000535222 PADI3Q9ULW8 664 aa8.82□□□□□ -1
CPSF7-214ENST00000535222 NOP58Q9Y2X3 529 aaKnown RBP8.82□□□□□ -1
CPSF7-214ENST00000535222 MRVI1Q9Y6F6 885 aa8.82□□□□□ -1
CPSF7-214ENST00000535222 DOPEY1Q5JWR5 2465 aa8.82□□□□□ -1
CPSF7-214ENST00000535222 ABCA12Q86UK0 2595 aa8.82□□□□□ -1
CPSF7-214ENST00000535222 C2orf16Q68DN1 1984 aa8.82□□□□□ -1
CPSF7-214ENST00000535222 C1QL1O75973 258 aa8.81□□□□□ -1
CPSF7-214ENST00000535222 CXCL14O95715 111 aa8.81□□□□□ -1
CPSF7-214ENST00000535222 LAMP2P13473 410 aa8.81□□□□□ -1
CPSF7-214ENST00000535222 GPC5P78333 572 aa8.81□□□□□ -1
CPSF7-214ENST00000535222 SP2Q02086 613 aa8.81□□□□□ -1
CPSF7-214ENST00000535222 SRSF1Q07955 248 aaKnown RBP eCLIP8.81□□□□□ -1
CPSF7-214ENST00000535222 ZNF252P-AS1Q0IIN9 211 aa8.81□□□□□ -1
CPSF7-214ENST00000535222 MTAPQ13126 283 aa8.81□□□□□ -1
CPSF7-214ENST00000535222 SNW1Q13573 536 aaKnown RBP8.81□□□□□ -1
CPSF7-214ENST00000535222 SIM2Q14190 667 aaPredicted RBP8.81□□□□□ -1
CPSF7-214ENST00000535222 MLF2Q15773 248 aaPredicted RBP8.81□□□□□ -1
CPSF7-214ENST00000535222 COL28A1Q2UY09 1125 aa8.81□□□□□ -1
CPSF7-214ENST00000535222 SLC44A4Q53GD3 710 aa8.81□□□□□ -1
CPSF7-214ENST00000535222 PPP4R3BQ5MIZ7 849 aa8.81□□□□□ -1
CPSF7-214ENST00000535222 C19orf48Q6RUI8 117 aa8.81□□□□□ -1
CPSF7-214ENST00000535222 RSPH3Q86UC2 560 aa8.81□□□□□ -1
CPSF7-214ENST00000535222 PPFIBP1Q86W92 1011 aa8.81□□□□□ -1
CPSF7-214ENST00000535222 SYTL5Q8TDW5 730 aaPredicted RBP8.81□□□□□ -1
CPSF7-214ENST00000535222 STAMQ92783 540 aa8.81□□□□□ -1
CPSF7-214ENST00000535222 TAAR1Q96RJ0 339 aa8.81□□□□□ -1
CPSF7-214ENST00000535222 BCAS3Q9H6U6 928 aa8.81□□□□□ -1
CPSF7-214ENST00000535222 ELAC1Q9H777 363 aaKnown RBP8.81□□□□□ -1
CPSF7-214ENST00000535222 ZNF287Q9HBT7 754 aa8.81□□□□□ -1
CPSF7-214ENST00000535222 RGS18Q9NS28 235 aa8.81□□□□□ -1
CPSF7-214ENST00000535222 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP8.81□□□□□ -18e-9■■■■■ 27.8
CPSF7-214ENST00000535222 SPG21Q9NZD8 308 aa8.81□□□□□ -1
CPSF7-214ENST00000535222 COL20A1Q9P218 1284 aa8.81□□□□□ -1
CPSF7-214ENST00000535222 LRFN2Q9ULH4 789 aa8.81□□□□□ -1
CPSF7-214ENST00000535222 SUPT16HQ9Y5B9 1047 aaKnown RBP8.81□□□□□ -1
CPSF7-214ENST00000535222 RAI2Q9Y5P3 530 aa8.81□□□□□ -1
CPSF7-214ENST00000535222 CDY2AQ9Y6F7 541 aa8.81□□□□□ -1
CPSF7-214ENST00000535222 NOTCH2Q04721 2471 aa8.81□□□□□ -1
CPSF7-214ENST00000535222 CACNA1EQ15878 2313 aa8.81□□□□□ -1
CPSF7-214ENST00000535222 IGSF9BQ9UPX0 1349 aa8.8□□□□□ -1
CPSF7-214ENST00000535222 URB1O60287 2271 aaKnown RBP8.8□□□□□ -1
CPSF7-214ENST00000535222 SHISA7A6NL88 538 aa8.8□□□□□ -1
CPSF7-214ENST00000535222 C9IYK1 514 aa8.8□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms