RNA–Protein interactions for RNA: ENST00000534406.1

SIPA1-210, Transcript of signal-induced proliferation-associated 1, humanhuman

TSL 3

Gene SIPA1, Length 351 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIPA1-210ENST00000534406 DDIT3P35638 169 aa27.05■■□□□ 1.92
SIPA1-210ENST00000534406 THPOP40225 353 aa27.05■■□□□ 1.92
SIPA1-210ENST00000534406 MAGEA10P43363 369 aaPredicted RBP27.05■■□□□ 1.92
SIPA1-210ENST00000534406 MDM2Q00987 491 aaPredicted RBP27.05■■□□□ 1.92
SIPA1-210ENST00000534406 STK38Q15208 465 aa27.05■■□□□ 1.92
SIPA1-210ENST00000534406 TARBP2Q15633 366 aaKnown RBP27.05■■□□□ 1.92
SIPA1-210ENST00000534406 PRPF38BQ5VTL8 546 aaKnown RBP27.05■■□□□ 1.92
SIPA1-210ENST00000534406 ATL3Q6DD88 541 aa27.05■■□□□ 1.92
SIPA1-210ENST00000534406 MFSD5Q6N075 450 aa27.05■■□□□ 1.92
SIPA1-210ENST00000534406 OTUD6AQ7L8S5 288 aa27.05■■□□□ 1.92
SIPA1-210ENST00000534406 CATSPER3Q86XQ3 398 aa27.05■■□□□ 1.92
SIPA1-210ENST00000534406 AK8Q96MA6 479 aa27.05■■□□□ 1.92
SIPA1-210ENST00000534406 EVPLQ92817 2033 aa27.05■■□□□ 1.92
SIPA1-210ENST00000534406 MAGEB2O15479 319 aa27.04■■□□□ 1.92
SIPA1-210ENST00000534406 YEATS4O95619 227 aa27.04■■□□□ 1.92
SIPA1-210ENST00000534406 SELPP16109 830 aa27.04■■□□□ 1.92
SIPA1-210ENST00000534406 MUTP22033 750 aa27.04■■□□□ 1.92
SIPA1-210ENST00000534406 MARCKSP29966 332 aaPredicted RBP27.04■■□□□ 1.92
SIPA1-210ENST00000534406 CCL23P55773 120 aa27.04■■□□□ 1.92
SIPA1-210ENST00000534406 NUCB2P80303 420 aa27.04■■□□□ 1.92
SIPA1-210ENST00000534406 TBC1D8BQ0IIM8 1120 aa27.04■■□□□ 1.92
SIPA1-210ENST00000534406 SLC39A14Q15043 492 aa27.04■■□□□ 1.92
SIPA1-210ENST00000534406 POTEGQ6S5H5 508 aa27.04■■□□□ 1.92
SIPA1-210ENST00000534406 RSPH3Q86UC2 560 aa27.04■■□□□ 1.92
SIPA1-210ENST00000534406 TMEM199Q8N511 208 aa27.04■■□□□ 1.92
SIPA1-210ENST00000534406 CCDC43Q96MW1 224 aaKnown RBP27.04■■□□□ 1.92
SIPA1-210ENST00000534406 CYP26B1Q9NR63 512 aa27.04■■□□□ 1.92
SIPA1-210ENST00000534406 TFIP11Q9UBB9 837 aaKnown RBP27.04■■□□□ 1.92
SIPA1-210ENST00000534406 PPME1Q9Y570 386 aa27.04■■□□□ 1.92
SIPA1-210ENST00000534406 LONP1P36776 959 aaKnown RBP27.03■■□□□ 1.92
SIPA1-210ENST00000534406 LRRC8DQ7L1W4 858 aa27.03■■□□□ 1.92
SIPA1-210ENST00000534406 RPAINQ86UA6 219 aa27.03■■□□□ 1.92
SIPA1-210ENST00000534406 CEP170P1Q96L14 293 aa27.03■■□□□ 1.92
SIPA1-210ENST00000534406 FAM49AQ9H0Q0 323 aaPredicted RBP27.03■■□□□ 1.92
SIPA1-210ENST00000534406 TSHZ2Q9NRE2 1034 aa27.03■■□□□ 1.92
SIPA1-210ENST00000534406 FBXO2Q9UK22 296 aaPredicted RBP27.03■■□□□ 1.92
SIPA1-210ENST00000534406 ATP6V1DQ9Y5K8 247 aa27.03■■□□□ 1.92
SIPA1-210ENST00000534406 LOXHD1Q8IVV2 1947 aa27.02■■□□□ 1.92
SIPA1-210ENST00000534406 KDM3AQ9Y4C1 1321 aa27.02■■□□□ 1.92
SIPA1-210ENST00000534406 SMIM35A0A1B0GVV1 85 aa27.02■■□□□ 1.92
SIPA1-210ENST00000534406 NPEPPSP55786 919 aa27.02■■□□□ 1.92
SIPA1-210ENST00000534406 FPGSQ05932 587 aa27.02■■□□□ 1.92
SIPA1-210ENST00000534406 ZNF618Q5T7W0 954 aa27.02■■□□□ 1.92
SIPA1-210ENST00000534406 LINC00301Q8NCQ3 95 aa27.02■■□□□ 1.92
SIPA1-210ENST00000534406 DNAJB3Q8WWF6 145 aa27.02■■□□□ 1.92
SIPA1-210ENST00000534406 SCLYQ96I15 445 aa27.02■■□□□ 1.92
SIPA1-210ENST00000534406 CEP89Q96ST8 783 aa27.02■■□□□ 1.92
SIPA1-210ENST00000534406 SH2D3AQ9BRG2 576 aa27.02■■□□□ 1.92
SIPA1-210ENST00000534406 ANKEF1Q9NU02 776 aa27.02■■□□□ 1.92
SIPA1-210ENST00000534406 SCN5AQ14524 2016 aa27.01■■□□□ 1.91
SIPA1-210ENST00000534406 CTSHP09668 335 aa27.01■■□□□ 1.91
SIPA1-210ENST00000534406 CDC25AP30304 524 aa27.01■■□□□ 1.91
SIPA1-210ENST00000534406 DNM1Q05193 864 aaKnown RBP27.01■■□□□ 1.91
SIPA1-210ENST00000534406 GRIN1Q05586 938 aa27.01■■□□□ 1.91
SIPA1-210ENST00000534406 PPIGQ13427 754 aaKnown RBP eCLIP27.01■■□□□ 1.91
SIPA1-210ENST00000534406 XKR9Q5GH70 373 aa27.01■■□□□ 1.91
SIPA1-210ENST00000534406 METTL13Q8N6R0 699 aa27.01■■□□□ 1.91
SIPA1-210ENST00000534406 NACC1Q96RE7 527 aa27.01■■□□□ 1.91
SIPA1-210ENST00000534406 MMTAG2Q9BU76 263 aaKnown RBP27.01■■□□□ 1.91
SIPA1-210ENST00000534406 CFAP45Q9UL16 551 aa27.01■■□□□ 1.91
SIPA1-210ENST00000534406 SRPRBQ9Y5M8 271 aaKnown RBP27.01■■□□□ 1.91
SIPA1-210ENST00000534406 SPTLC2O15270 562 aa27■■□□□ 1.91
SIPA1-210ENST00000534406 IQCF3P0C7M6 154 aa27■■□□□ 1.91
SIPA1-210ENST00000534406 RFC5P40937 340 aa27■■□□□ 1.91
SIPA1-210ENST00000534406 KRI1Q8N9T8 703 aaKnown RBP27■■□□□ 1.91
SIPA1-210ENST00000534406 PIGOQ8TEQ8 1089 aa27■■□□□ 1.91
SIPA1-210ENST00000534406 GDF15Q99988 308 aa27■■□□□ 1.91
SIPA1-210ENST00000534406 JPH2Q9BR39 696 aaPredicted RBP27■■□□□ 1.91
SIPA1-210ENST00000534406 ZBTB39O15060 712 aa26.99■■□□□ 1.91
SIPA1-210ENST00000534406 SLC26A4O43511 780 aa26.99■■□□□ 1.91
SIPA1-210ENST00000534406 PARNO95453 639 aaKnown RBP26.99■■□□□ 1.91
SIPA1-210ENST00000534406 XRCC6P12956 609 aaKnown RBP eCLIP26.99■■□□□ 1.91
SIPA1-210ENST00000534406 CSF2RAP15509 400 aa26.99■■□□□ 1.91
SIPA1-210ENST00000534406 TMOD1P28289 359 aa26.99■■□□□ 1.91
SIPA1-210ENST00000534406 RFC2P35250 354 aa26.99■■□□□ 1.91
SIPA1-210ENST00000534406 UBA7P41226 1012 aa26.99■■□□□ 1.91
SIPA1-210ENST00000534406 RARRES1P49788 294 aa26.99■■□□□ 1.91
SIPA1-210ENST00000534406 CLCN3P51790 818 aa26.99■■□□□ 1.91
SIPA1-210ENST00000534406 POLGP54098 1239 aaPredicted RBP26.99■■□□□ 1.91
SIPA1-210ENST00000534406 TRAF7Q6Q0C0 670 aa26.99■■□□□ 1.91
SIPA1-210ENST00000534406 CABP7Q86V35 215 aa26.99■■□□□ 1.91
SIPA1-210ENST00000534406 LRRC71Q8N4P6 559 aa26.99■■□□□ 1.91
SIPA1-210ENST00000534406 SLC7A3Q8WY07 619 aa26.99■■□□□ 1.91
SIPA1-210ENST00000534406 CDK5RAP3Q96JB5 506 aa26.99■■□□□ 1.91
SIPA1-210ENST00000534406 MAP7D2Q96T17 732 aa26.99■■□□□ 1.91
SIPA1-210ENST00000534406 DDX19AQ9NUU7 478 aaKnown RBP26.99■■□□□ 1.91
SIPA1-210ENST00000534406 DBR1Q9UK59 544 aaKnown RBP26.99■■□□□ 1.91
SIPA1-210ENST00000534406 CIZ1Q9ULV3 898 aaPredicted RBP26.99■■□□□ 1.91
SIPA1-210ENST00000534406 RBM19Q9Y4C8 960 aaKnown RBP26.99■■□□□ 1.91
SIPA1-210ENST00000534406 SIP14410 1827 aa26.98■■□□□ 1.91
SIPA1-210ENST00000534406 RSPH10B2B2RC85 870 aa26.98■■□□□ 1.91
SIPA1-210ENST00000534406 M0QZ92 97 aa26.98■■□□□ 1.91
SIPA1-210ENST00000534406 PPP6R2O75170 966 aa26.98■■□□□ 1.91
SIPA1-210ENST00000534406 MAFO75444 373 aaPredicted RBP26.98■■□□□ 1.91
SIPA1-210ENST00000534406 RSPH10BP0C881 870 aa26.98■■□□□ 1.91
SIPA1-210ENST00000534406 MRPS6P82932 125 aaKnown RBP26.98■■□□□ 1.91
SIPA1-210ENST00000534406 ZRSR1Q15695 479 aaKnown RBP26.98■■□□□ 1.91
SIPA1-210ENST00000534406 ECM1Q16610 540 aa26.98■■□□□ 1.91
SIPA1-210ENST00000534406 EFCAB12Q6NXP0 572 aa26.98■■□□□ 1.91
SIPA1-210ENST00000534406 EXOC8Q8IYI6 725 aa26.98■■□□□ 1.91
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms