RNA–Protein interactions for RNA: ENST00000534049.5

ITGB1-219, Transcript of integrin subunit beta 1, humanhuman

TSL 4

Gene ITGB1, Length 562 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-219ENST00000534049 TRIM39Q9HCM9 518 aa5.71□□□□□ -1.5
ITGB1-219ENST00000534049 BTBD7Q9P203 1132 aa5.71□□□□□ -1.5
ITGB1-219ENST00000534049 COQ6Q9Y2Z9 468 aa5.71□□□□□ -1.5
ITGB1-219ENST00000534049 B3GALT1Q9Y5Z6 326 aa5.71□□□□□ -1.5
ITGB1-219ENST00000534049 ABCC8Q09428 1581 aa5.71□□□□□ -1.5
ITGB1-219ENST00000534049 FOXP2O15409 715 aa5.7□□□□□ -1.5
ITGB1-219ENST00000534049 MAFO75444 373 aaPredicted RBP5.7□□□□□ -1.5
ITGB1-219ENST00000534049 IGFALSP35858 605 aa5.7□□□□□ -1.5
ITGB1-219ENST00000534049 MAP3K12Q12852 859 aa5.7□□□□□ -1.5
ITGB1-219ENST00000534049 TMEM177Q53S58 311 aa5.7□□□□□ -1.5
ITGB1-219ENST00000534049 HS1BP3Q53T59 392 aa5.7□□□□□ -1.5
ITGB1-219ENST00000534049 C8orf49Q96NF6 230 aa5.7□□□□□ -1.5
ITGB1-219ENST00000534049 ZSWIM4Q9H7M6 989 aa5.7□□□□□ -1.5
ITGB1-219ENST00000534049 FGD5Q6ZNL6 1462 aa5.7□□□□□ -1.5
ITGB1-219ENST00000534049 CHD1O14646 1710 aa5.69□□□□□ -1.5
ITGB1-219ENST00000534049 ESYT3A0FGR9 886 aa5.69□□□□□ -1.5
ITGB1-219ENST00000534049 SCDO00767 359 aa5.69□□□□□ -1.5
ITGB1-219ENST00000534049 CNOT4O95628 575 aaKnown RBP5.69□□□□□ -1.5
ITGB1-219ENST00000534049 HMGCRP04035 888 aa5.69□□□□□ -1.5
ITGB1-219ENST00000534049 ASLP04424 464 aa5.69□□□□□ -1.5
ITGB1-219ENST00000534049 ECE1P42892 770 aa5.69□□□□□ -1.5
ITGB1-219ENST00000534049 RAC3P60763 192 aa5.69□□□□□ -1.5
ITGB1-219ENST00000534049 IRF9Q00978 393 aa5.69□□□□□ -1.5
ITGB1-219ENST00000534049 OTOP1Q7RTM1 612 aa5.69□□□□□ -1.5
ITGB1-219ENST00000534049 LIMS2Q7Z4I7 341 aa5.69□□□□□ -1.5
ITGB1-219ENST00000534049 IGSF22Q8N9C0 903 aa5.69□□□□□ -1.5
ITGB1-219ENST00000534049 HIPK4Q8NE63 616 aa5.69□□□□□ -1.5
ITGB1-219ENST00000534049 DNERQ8NFT8 737 aa5.69□□□□□ -1.5
ITGB1-219ENST00000534049 DLG3Q92796 817 aa5.69□□□□□ -1.5
ITGB1-219ENST00000534049 LMF1Q96S06 567 aa5.69□□□□□ -1.5
ITGB1-219ENST00000534049 ZDHHC5Q9C0B5 715 aa5.69□□□□□ -1.5
ITGB1-219ENST00000534049 OR10A5Q9H207 317 aa5.69□□□□□ -1.5
ITGB1-219ENST00000534049 TCAF1Q9Y4C2 921 aa5.69□□□□□ -1.5
ITGB1-219ENST00000534049 RAD54L2Q9Y4B4 1467 aa5.69□□□□□ -1.5
ITGB1-219ENST00000534049 CLASP1Q7Z460 1538 aa5.69□□□□□ -1.5
ITGB1-219ENST00000534049 PATE3B3GLJ2 98 aa5.68□□□□□ -1.5
ITGB1-219ENST00000534049 MMEP08473 750 aa5.68□□□□□ -1.5
ITGB1-219ENST00000534049 ZNF20P17024 532 aa5.68□□□□□ -1.5
ITGB1-219ENST00000534049 FNTBP49356 437 aa5.68□□□□□ -1.5
ITGB1-219ENST00000534049 IL13RA1P78552 427 aa5.68□□□□□ -1.5
ITGB1-219ENST00000534049 EIF4HQ15056 248 aaKnown RBP5.68□□□□□ -1.5
ITGB1-219ENST00000534049 ZCCHC8Q6NZY4 707 aaKnown RBP5.68□□□□□ -1.5
ITGB1-219ENST00000534049 CC2D1AQ6P1N0 951 aaPredicted RBP5.68□□□□□ -1.5
ITGB1-219ENST00000534049 OTOP2Q7RTS6 562 aa5.68□□□□□ -1.5
ITGB1-219ENST00000534049 FGD2Q7Z6J4 655 aa5.68□□□□□ -1.5
ITGB1-219ENST00000534049 ASB15Q8WXK1 588 aa5.68□□□□□ -1.5
ITGB1-219ENST00000534049 GBP4Q96PP9 640 aa5.68□□□□□ -1.5
ITGB1-219ENST00000534049 MEGF9Q9H1U4 602 aa5.68□□□□□ -1.5
ITGB1-219ENST00000534049 CABP5Q9NP86 173 aa5.68□□□□□ -1.5
ITGB1-219ENST00000534049 AQRO60306 1485 aaKnown RBP eCLIP5.68□□□□□ -1.53e-6■□□□□ 10.3
ITGB1-219ENST00000534049 SNAPC4Q5SXM2 1469 aa5.68□□□□□ -1.5
ITGB1-219ENST00000534049 ARAP1Q96P48 1450 aa5.68□□□□□ -1.5
ITGB1-219ENST00000534049 ABCA5Q8WWZ7 1642 aa5.67□□□□□ -1.5
ITGB1-219ENST00000534049 KCNK3O14649 394 aa5.67□□□□□ -1.5
ITGB1-219ENST00000534049 GPR42O15529 346 aa5.67□□□□□ -1.5
ITGB1-219ENST00000534049 RFPL3O75679 317 aa5.67□□□□□ -1.5
ITGB1-219ENST00000534049 RAPGEF3O95398 923 aa5.67□□□□□ -1.5
ITGB1-219ENST00000534049 SELENOPP49908 381 aa5.67□□□□□ -1.5
ITGB1-219ENST00000534049 KRTAP10-2P60368 255 aa5.67□□□□□ -1.5
ITGB1-219ENST00000534049 UBE2R2Q712K3 238 aaPredicted RBP5.67□□□□□ -1.5
ITGB1-219ENST00000534049 GPR155Q7Z3F1 870 aa5.67□□□□□ -1.5
ITGB1-219ENST00000534049 NME9Q86XW9 330 aa5.67□□□□□ -1.5
ITGB1-219ENST00000534049 CHST14Q8NCH0 376 aa5.67□□□□□ -1.5
ITGB1-219ENST00000534049 SH3TC2Q8TF17 1288 aa5.67□□□□□ -1.5
ITGB1-219ENST00000534049 DEF6Q9H4E7 631 aa5.67□□□□□ -1.5
ITGB1-219ENST00000534049 ACSS2Q9NR19 701 aa5.67□□□□□ -1.5
ITGB1-219ENST00000534049 INTS7Q9NVH2 962 aaKnown RBP5.67□□□□□ -1.5
ITGB1-219ENST00000534049 TMEM260Q9NX78 707 aa5.67□□□□□ -1.5
ITGB1-219ENST00000534049 TSC22D4Q9Y3Q8 395 aa5.67□□□□□ -1.5
ITGB1-219ENST00000534049 A0A0G2JNJ9 132 aa5.66□□□□□ -1.5
ITGB1-219ENST00000534049 OPA1O60313 960 aa5.66□□□□□ -1.5
ITGB1-219ENST00000534049 MPIG6BO95866 241 aa5.66□□□□□ -1.5
ITGB1-219ENST00000534049 KCNA6P17658 529 aa5.66□□□□□ -1.5
ITGB1-219ENST00000534049 APEX1P27695 318 aaKnown RBP5.66□□□□□ -1.5
ITGB1-219ENST00000534049 MC4RP32245 332 aa5.66□□□□□ -1.5
ITGB1-219ENST00000534049 MEOX1P50221 254 aa5.66□□□□□ -1.5
ITGB1-219ENST00000534049 NFYCQ13952 458 aa5.66□□□□□ -1.5
ITGB1-219ENST00000534049 TMEM132BQ14DG7 1078 aa5.66□□□□□ -1.5
ITGB1-219ENST00000534049 KANK2Q63ZY3 851 aa5.66□□□□□ -1.5
ITGB1-219ENST00000534049 TMEM200BQ69YZ2 307 aa5.66□□□□□ -1.5
ITGB1-219ENST00000534049 GRAMD4Q6IC98 578 aa5.66□□□□□ -1.5
ITGB1-219ENST00000534049 GIMAP8Q8ND71 665 aaPredicted RBP5.66□□□□□ -1.5
ITGB1-219ENST00000534049 NEIL1Q96FI4 390 aaPredicted RBP5.66□□□□□ -1.5
ITGB1-219ENST00000534049 FOXB1Q99853 325 aa5.66□□□□□ -1.5
ITGB1-219ENST00000534049 KRTAP4-11Q9BYQ6 195 aa5.66□□□□□ -1.5
ITGB1-219ENST00000534049 KRTAP4-2Q9BYR5 136 aa5.66□□□□□ -1.5
ITGB1-219ENST00000534049 KRTAP3-1Q9BYR8 98 aa5.66□□□□□ -1.5
ITGB1-219ENST00000534049 KLC2Q9H0B6 622 aa5.66□□□□□ -1.5
ITGB1-219ENST00000534049 UCKL1Q9NWZ5 548 aa5.66□□□□□ -1.5
ITGB1-219ENST00000534049 SAMD15Q9P1V8 674 aa5.66□□□□□ -1.5
ITGB1-219ENST00000534049 MAGEC2Q9UBF1 373 aaPredicted RBP5.66□□□□□ -1.5
ITGB1-219ENST00000534049 Q9UFV3 132 aa5.66□□□□□ -1.5
ITGB1-219ENST00000534049 MAGI1Q96QZ7 1491 aaPredicted RBP5.65□□□□□ -1.5
ITGB1-219ENST00000534049 GOLGA6L22H0YM25 854 aa5.65□□□□□ -1.5
ITGB1-219ENST00000534049 ZNF623O75123 536 aa5.65□□□□□ -1.5
ITGB1-219ENST00000534049 CYP17A1P05093 508 aa5.65□□□□□ -1.5
ITGB1-219ENST00000534049 ZNF888P0CJ79 500 aaPredicted RBP5.65□□□□□ -1.5
ITGB1-219ENST00000534049 INSRRP14616 1297 aa5.65□□□□□ -1.5
ITGB1-219ENST00000534049 MECP2P51608 486 aaKnown RBP5.65□□□□□ -1.5
ITGB1-219ENST00000534049 SESN2P58004 480 aaPredicted RBP5.65□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms