RNA–Protein interactions for RNA: ENST00000533870.1

SOX6-217, Transcript of SRY-box 6, humanhuman

TSL 5

Gene SOX6, Length 7,224 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX6-217ENST00000533870 TMOD4Q9NZQ9 345 aa4.36□□□□□ -1.71
SOX6-217ENST00000533870 DNAJB4Q9UDY4 337 aa4.36□□□□□ -1.71
SOX6-217ENST00000533870 HPS5Q9UPZ3 1129 aa4.36□□□□□ -1.71
SOX6-217ENST00000533870 SMCO2A6NFE2 343 aa4.36□□□□□ -1.71
SOX6-217ENST00000533870 GOLGA8MH3BSY2 632 aa4.36□□□□□ -1.71
SOX6-217ENST00000533870 RBAK-RBAKDNI3L0D1 243 aa4.36□□□□□ -1.71
SOX6-217ENST00000533870 SPAG7O75391 227 aa4.36□□□□□ -1.71
SOX6-217ENST00000533870 LCA5LO95447 670 aa4.36□□□□□ -1.71
SOX6-217ENST00000533870 BRAFP15056 766 aa4.36□□□□□ -1.71
SOX6-217ENST00000533870 GUCY2FP51841 1108 aa4.36□□□□□ -1.71
SOX6-217ENST00000533870 PLTPP55058 493 aa4.36□□□□□ -1.71
SOX6-217ENST00000533870 SFSWAPQ12872 951 aaKnown RBP4.36□□□□□ -1.71
SOX6-217ENST00000533870 BLMHQ13867 455 aa4.36□□□□□ -1.71
SOX6-217ENST00000533870 SURF1Q15526 300 aa4.36□□□□□ -1.71
SOX6-217ENST00000533870 PDZD4Q76G19 769 aaPredicted RBP4.36□□□□□ -1.71
SOX6-217ENST00000533870 ZNF677Q86XU0 584 aa4.36□□□□□ -1.71
SOX6-217ENST00000533870 TERB1Q8NA31 727 aa4.36□□□□□ -1.71
SOX6-217ENST00000533870 NFATC2IPQ8NCF5 419 aa4.36□□□□□ -1.71
SOX6-217ENST00000533870 LRRC1Q9BTT6 524 aa4.36□□□□□ -1.71
SOX6-217ENST00000533870 FTOQ9C0B1 505 aaKnown RBP eCLIP4.36□□□□□ -1.71
SOX6-217ENST00000533870 KIF9Q9HAQ2 790 aa4.36□□□□□ -1.71
SOX6-217ENST00000533870 CIDEBQ9UHD4 219 aa4.36□□□□□ -1.71
SOX6-217ENST00000533870 SYNPO2Q9UMS6 1093 aa4.36□□□□□ -1.71
SOX6-217ENST00000533870 APOBEC2Q9Y235 224 aaKnown RBP4.36□□□□□ -1.71
SOX6-217ENST00000533870 ZNF609O15014 1411 aa4.36□□□□□ -1.71
SOX6-217ENST00000533870 F8W8V4 182 aa4.36□□□□□ -1.71
SOX6-217ENST00000533870 ZC3H11AO75152 810 aaKnown RBP eCLIP4.36□□□□□ -1.71
SOX6-217ENST00000533870 FGGP02679 453 aa4.36□□□□□ -1.71
SOX6-217ENST00000533870 ARL4CP56559 192 aa4.36□□□□□ -1.71
SOX6-217ENST00000533870 RASSF7Q02833 373 aa4.36□□□□□ -1.71
SOX6-217ENST00000533870 SLC15A2Q16348 729 aa4.36□□□□□ -1.71
SOX6-217ENST00000533870 EAPPQ56P03 285 aaPredicted RBP4.36□□□□□ -1.71
SOX6-217ENST00000533870 FAM186BQ8IYM0 893 aa4.36□□□□□ -1.71
SOX6-217ENST00000533870 SPDL1Q96EA4 605 aa4.36□□□□□ -1.71
SOX6-217ENST00000533870 RAB20Q9NX57 234 aa4.36□□□□□ -1.71
SOX6-217ENST00000533870 FAF1Q9UNN5 650 aaPredicted RBP4.36□□□□□ -1.71
SOX6-217ENST00000533870 CD2APQ9Y5K6 639 aa4.36□□□□□ -1.71
SOX6-217ENST00000533870 ENC1O14682 589 aa4.35□□□□□ -1.71
SOX6-217ENST00000533870 NVLO15381 856 aaKnown RBP4.35□□□□□ -1.71
SOX6-217ENST00000533870 RGS2P41220 211 aa4.35□□□□□ -1.71
SOX6-217ENST00000533870 SERPINB9P50453 376 aa4.35□□□□□ -1.71
SOX6-217ENST00000533870 FXR2P51116 673 aaKnown RBP eCLIP4.35□□□□□ -1.71
SOX6-217ENST00000533870 CTSWP56202 376 aa4.35□□□□□ -1.71
SOX6-217ENST00000533870 COPS2P61201 443 aa4.35□□□□□ -1.71
SOX6-217ENST00000533870 TFAP4Q01664 338 aa4.35□□□□□ -1.71
SOX6-217ENST00000533870 PLCB3Q01970 1234 aa4.35□□□□□ -1.71
SOX6-217ENST00000533870 TAP1Q03518 808 aa4.35□□□□□ -1.71
SOX6-217ENST00000533870 FMR1Q06787 632 aaKnown RBP eCLIP4.35□□□□□ -1.71
SOX6-217ENST00000533870 MED21Q13503 144 aa4.35□□□□□ -1.71
SOX6-217ENST00000533870 LBRQ14739 615 aaKnown RBP4.35□□□□□ -1.71
SOX6-217ENST00000533870 FSCBQ5H9T9 825 aa4.35□□□□□ -1.71
SOX6-217ENST00000533870 KCTD16Q68DU8 428 aa4.35□□□□□ -1.71
SOX6-217ENST00000533870 AMNQ9BXJ7 453 aa4.35□□□□□ -1.71
SOX6-217ENST00000533870 TLR10Q9BXR5 811 aa4.35□□□□□ -1.71
SOX6-217ENST00000533870 LEMD3Q9Y2U8 911 aa4.35□□□□□ -1.71
SOX6-217ENST00000533870 LMTK3Q96Q04 1460 aa4.35□□□□□ -1.71
SOX6-217ENST00000533870 KIF28PB7ZC32 967 aa4.35□□□□□ -1.71
SOX6-217ENST00000533870 TMEM232C9JQI7 657 aa4.35□□□□□ -1.71
SOX6-217ENST00000533870 KLRF2D3W0D1 207 aa4.35□□□□□ -1.71
SOX6-217ENST00000533870 PHF2O75151 1096 aa4.35□□□□□ -1.71
SOX6-217ENST00000533870 TMCC1O94876 653 aa4.35□□□□□ -1.71
SOX6-217ENST00000533870 ACTN1P12814 892 aa4.35□□□□□ -1.71
SOX6-217ENST00000533870 NQO1P15559 274 aaKnown RBP4.35□□□□□ -1.71
SOX6-217ENST00000533870 SERPINB3P29508 390 aa4.35□□□□□ -1.71
SOX6-217ENST00000533870 PTK2Q05397 1052 aa4.35□□□□□ -1.71
SOX6-217ENST00000533870 TROAPQ12815 778 aa4.35□□□□□ -1.71
SOX6-217ENST00000533870 NKX1-1Q15270 411 aaPredicted RBP4.35□□□□□ -1.71
SOX6-217ENST00000533870 SGSM1Q2NKQ1 1148 aa4.35□□□□□ -1.71
SOX6-217ENST00000533870 PCNX4Q63HM2 1172 aa4.35□□□□□ -1.71
SOX6-217ENST00000533870 AAGABQ6PD74 315 aa4.35□□□□□ -1.71
SOX6-217ENST00000533870 ATG9AQ7Z3C6 839 aa4.35□□□□□ -1.71
SOX6-217ENST00000533870 JAMLQ86YT9 394 aa4.35□□□□□ -1.71
SOX6-217ENST00000533870 EXOC8Q8IYI6 725 aa4.35□□□□□ -1.71
SOX6-217ENST00000533870 RIN3Q8TB24 985 aa4.35□□□□□ -1.71
SOX6-217ENST00000533870 IGDCC4Q8TDY8 1250 aa4.35□□□□□ -1.71
SOX6-217ENST00000533870 FGD4Q96M96 766 aa4.35□□□□□ -1.71
SOX6-217ENST00000533870 NUDCD1Q96RS6 583 aa4.35□□□□□ -1.71
SOX6-217ENST00000533870 TUBA8Q9NY65 449 aaPredicted RBP4.35□□□□□ -1.71
SOX6-217ENST00000533870 SAMM50Q9Y512 469 aa4.35□□□□□ -1.71
SOX6-217ENST00000533870 RASSF9O75901 435 aa4.35□□□□□ -1.71
SOX6-217ENST00000533870 ESRRAP11474 423 aaPredicted RBP4.35□□□□□ -1.71
SOX6-217ENST00000533870 PCSK2P16519 638 aa4.35□□□□□ -1.71
SOX6-217ENST00000533870 GCLCP48506 637 aaPredicted RBP4.35□□□□□ -1.71
SOX6-217ENST00000533870 MAGOHP61326 146 aaKnown RBP4.35□□□□□ -1.71
SOX6-217ENST00000533870 ENPEPQ07075 957 aa4.35□□□□□ -1.71
SOX6-217ENST00000533870 MAPRE2Q15555 327 aa4.35□□□□□ -1.71
SOX6-217ENST00000533870 TMEM237Q96Q45 408 aa4.35□□□□□ -1.71
SOX6-217ENST00000533870 NACC1Q96RE7 527 aa4.35□□□□□ -1.71
SOX6-217ENST00000533870 TRAIPQ9BWF2 469 aa4.35□□□□□ -1.71
SOX6-217ENST00000533870 UBA5Q9GZZ9 404 aa4.35□□□□□ -1.71
SOX6-217ENST00000533870 ARMT1Q9H993 441 aa4.35□□□□□ -1.71
SOX6-217ENST00000533870 TRPC6Q9Y210 931 aa4.35□□□□□ -1.71
SOX6-217ENST00000533870 ATP8A1Q9Y2Q0 1164 aa4.35□□□□□ -1.71
SOX6-217ENST00000533870 FAM47DPA6NHR8 397 aa4.35□□□□□ -1.71
SOX6-217ENST00000533870 FESP07332 822 aa4.35□□□□□ -1.71
SOX6-217ENST00000533870 PTPN4P29074 926 aa4.35□□□□□ -1.71
SOX6-217ENST00000533870 ADCY8P40145 1251 aa4.35□□□□□ -1.71
SOX6-217ENST00000533870 SCTRP47872 440 aa4.35□□□□□ -1.71
SOX6-217ENST00000533870 MXI1P50539 228 aa4.35□□□□□ -1.71
SOX6-217ENST00000533870 DNA2P51530 1060 aa4.35□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms