RNA–Protein interactions for RNA: ENST00000533229.1

CACNA1E-208, Transcript of calcium voltage-gated channel subunit alpha1 E, humanhuman

TSL 1 (best)

Gene CACNA1E, Length 2,142 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1E-208ENST00000533229 SIX2Q9NPC8 291 aa16.82■□□□□ 0.28
CACNA1E-208ENST00000533229 DMGDHQ9UI17 866 aaKnown RBP16.82■□□□□ 0.28
CACNA1E-208ENST00000533229 MRPL11Q9Y3B7 192 aaKnown RBP16.82■□□□□ 0.28
CACNA1E-208ENST00000533229 TBC1D12O60347 775 aa16.82■□□□□ 0.28
CACNA1E-208ENST00000533229 FAM13AO94988 1023 aa16.82■□□□□ 0.28
CACNA1E-208ENST00000533229 MATR3P43243 847 aaKnown RBP eCLIP16.82■□□□□ 0.28
CACNA1E-208ENST00000533229 TRAF1Q13077 416 aa16.82■□□□□ 0.28
CACNA1E-208ENST00000533229 KIAA0753Q2KHM9 967 aa16.82■□□□□ 0.28
CACNA1E-208ENST00000533229 B3GNT9Q6UX72 402 aa16.82■□□□□ 0.28
CACNA1E-208ENST00000533229 KCTD17Q8N5Z5 321 aa16.82■□□□□ 0.28
CACNA1E-208ENST00000533229 MS4A14Q96JA4 679 aa16.82■□□□□ 0.28
CACNA1E-208ENST00000533229 STK32BQ9NY57 414 aa16.82■□□□□ 0.28
CACNA1E-208ENST00000533229 PLA2G6O60733 806 aa16.81■□□□□ 0.28
CACNA1E-208ENST00000533229 GAP43P17677 238 aa16.81■□□□□ 0.28
CACNA1E-208ENST00000533229 RPL13P26373 211 aaKnown RBP16.81■□□□□ 0.28
CACNA1E-208ENST00000533229 INPP5BP32019 993 aa16.81■□□□□ 0.28
CACNA1E-208ENST00000533229 ITIH3Q06033 890 aa16.81■□□□□ 0.28
CACNA1E-208ENST00000533229 NBPF9Q3BBW0 867 aa16.81■□□□□ 0.28
CACNA1E-208ENST00000533229 GJB7Q6PEY0 223 aa16.81■□□□□ 0.28
CACNA1E-208ENST00000533229 PARVGQ9HBI0 331 aa16.81■□□□□ 0.28
CACNA1E-208ENST00000533229 COL20A1Q9P218 1284 aa16.81■□□□□ 0.28
CACNA1E-208ENST00000533229 ZNF536O15090 1300 aa16.81■□□□□ 0.28
CACNA1E-208ENST00000533229 SHTN1A0MZ66 631 aa16.81■□□□□ 0.28
CACNA1E-208ENST00000533229 SLC16A3O15427 465 aaKnown RBP16.81■□□□□ 0.28
CACNA1E-208ENST00000533229 EIF3JO75822 258 aaKnown RBP16.81■□□□□ 0.28
CACNA1E-208ENST00000533229 FTCDO95954 541 aa16.81■□□□□ 0.28
CACNA1E-208ENST00000533229 EPB41P11171 864 aaKnown RBP16.81■□□□□ 0.28
CACNA1E-208ENST00000533229 ITGB5P18084 799 aa16.81■□□□□ 0.28
CACNA1E-208ENST00000533229 IQCEQ6IPM2 695 aa16.81■□□□□ 0.28
CACNA1E-208ENST00000533229 ZNF720Q7Z2F6 126 aa16.81■□□□□ 0.28
CACNA1E-208ENST00000533229 SPAG5Q96R06 1193 aa16.81■□□□□ 0.28
CACNA1E-208ENST00000533229 METTL14Q9HCE5 456 aaKnown RBP16.81■□□□□ 0.28
CACNA1E-208ENST00000533229 VPS18Q9P253 973 aa16.81■□□□□ 0.28
CACNA1E-208ENST00000533229 PACSIN2Q9UNF0 486 aaPredicted RBP16.81■□□□□ 0.28
CACNA1E-208ENST00000533229 ZC3H4Q9UPT8 1303 aaKnown RBP16.8■□□□□ 0.28
CACNA1E-208ENST00000533229 IPO5O00410 1097 aaKnown RBP16.8■□□□□ 0.28
CACNA1E-208ENST00000533229 EIF3DO15371 548 aaKnown RBP eCLIP16.8■□□□□ 0.28
CACNA1E-208ENST00000533229 DPEP1P16444 411 aa16.8■□□□□ 0.28
CACNA1E-208ENST00000533229 MCM3P25205 808 aa16.8■□□□□ 0.28
CACNA1E-208ENST00000533229 PTGER2P43116 358 aa16.8■□□□□ 0.28
CACNA1E-208ENST00000533229 SLC7A5Q01650 507 aa16.8■□□□□ 0.28
CACNA1E-208ENST00000533229 FAM160B2Q86V87 743 aa16.8■□□□□ 0.28
CACNA1E-208ENST00000533229 TEX2Q8IWB9 1127 aa16.8■□□□□ 0.28
CACNA1E-208ENST00000533229 TXLNBQ8N3L3 684 aa16.8■□□□□ 0.28
CACNA1E-208ENST00000533229 BANK1Q8NDB2 785 aa16.8■□□□□ 0.28
CACNA1E-208ENST00000533229 FEM1BQ9UK73 627 aa16.8■□□□□ 0.28
CACNA1E-208ENST00000533229 FAN1Q9Y2M0 1017 aa16.8■□□□□ 0.28
CACNA1E-208ENST00000533229 PCDHGC5Q9Y5F6 944 aa16.8■□□□□ 0.28
CACNA1E-208ENST00000533229 TNS1Q9HBL0 1735 aaKnown RBP16.8■□□□□ 0.28
CACNA1E-208ENST00000533229 FRMPD4Q14CM0 1322 aa16.8■□□□□ 0.28
CACNA1E-208ENST00000533229 DDX39AO00148 427 aaKnown RBP16.79■□□□□ 0.28
CACNA1E-208ENST00000533229 WNT10BO00744 389 aa16.79■□□□□ 0.28
CACNA1E-208ENST00000533229 PHACTR2O75167 634 aa16.79■□□□□ 0.28
CACNA1E-208ENST00000533229 TNNT3P45378 269 aaPredicted RBP16.79■□□□□ 0.28
CACNA1E-208ENST00000533229 DNA2P51530 1060 aa16.79■□□□□ 0.28
CACNA1E-208ENST00000533229 ZNF131P52739 623 aa16.79■□□□□ 0.28
CACNA1E-208ENST00000533229 GPS2Q13227 327 aa16.79■□□□□ 0.28
CACNA1E-208ENST00000533229 DGKZQ13574 1117 aa16.79■□□□□ 0.28
CACNA1E-208ENST00000533229 FKBP1CQ5VVH2 108 aa16.79■□□□□ 0.28
CACNA1E-208ENST00000533229 CCDC102AQ96A19 550 aa16.79■□□□□ 0.28
CACNA1E-208ENST00000533229 NACC1Q96RE7 527 aa16.79■□□□□ 0.28
CACNA1E-208ENST00000533229 LXNQ9BS40 222 aa16.79■□□□□ 0.28
CACNA1E-208ENST00000533229 RBM12Q9NTZ6 932 aaKnown RBP16.79■□□□□ 0.28
CACNA1E-208ENST00000533229 PKD2L1Q9P0L9 805 aa16.79■□□□□ 0.28
CACNA1E-208ENST00000533229 GCNT4Q9P109 453 aa16.79■□□□□ 0.28
CACNA1E-208ENST00000533229 HPCAL4Q9UM19 191 aa16.79■□□□□ 0.28
CACNA1E-208ENST00000533229 NFIBO00712 420 aa16.79■□□□□ 0.28
CACNA1E-208ENST00000533229 CCDC181Q5TID7 509 aa16.79■□□□□ 0.28
CACNA1E-208ENST00000533229 GBP6Q6ZN66 633 aa16.79■□□□□ 0.28
CACNA1E-208ENST00000533229 FAM83AQ86UY5 434 aa16.79■□□□□ 0.28
CACNA1E-208ENST00000533229 IL31RAQ8NI17 732 aa16.79■□□□□ 0.28
CACNA1E-208ENST00000533229 MXRA8Q9BRK3 442 aa16.79■□□□□ 0.28
CACNA1E-208ENST00000533229 GRID2IPA4D2P6 1211 aa16.78■□□□□ 0.28
CACNA1E-208ENST00000533229 SYF2O95926 243 aaKnown RBP16.78■□□□□ 0.28
CACNA1E-208ENST00000533229 HSD17B4P51659 736 aa16.78■□□□□ 0.28
CACNA1E-208ENST00000533229 JAM2P57087 298 aa16.78■□□□□ 0.28
CACNA1E-208ENST00000533229 MAP3K10Q02779 954 aa16.78■□□□□ 0.28
CACNA1E-208ENST00000533229 MAP9Q49MG5 647 aa16.78■□□□□ 0.28
CACNA1E-208ENST00000533229 MEI1Q5TIA1 1274 aa16.78■□□□□ 0.28
CACNA1E-208ENST00000533229 FAM186BQ8IYM0 893 aa16.78■□□□□ 0.28
CACNA1E-208ENST00000533229 DAW1Q8N136 415 aa16.78■□□□□ 0.28
CACNA1E-208ENST00000533229 MTMR14Q8NCE2 650 aa16.78■□□□□ 0.28
CACNA1E-208ENST00000533229 ZBED3Q96IU2 234 aaPredicted RBP16.78■□□□□ 0.28
CACNA1E-208ENST00000533229 SELENOOQ9BVL4 669 aa16.78■□□□□ 0.28
CACNA1E-208ENST00000533229 ZNF341Q9BYN7 854 aa16.78■□□□□ 0.28
CACNA1E-208ENST00000533229 WDR11Q9BZH6 1224 aa16.78■□□□□ 0.28
CACNA1E-208ENST00000533229 VIPAS39Q9H9C1 493 aa16.78■□□□□ 0.28
CACNA1E-208ENST00000533229 LUC7LQ9NQ29 371 aaKnown RBP16.78■□□□□ 0.28
CACNA1E-208ENST00000533229 NAGPAQ9UK23 515 aa16.78■□□□□ 0.28
CACNA1E-208ENST00000533229 CCPG1Q9ULG6 757 aa16.78■□□□□ 0.28
CACNA1E-208ENST00000533229 ZNRF3Q9ULT6 936 aa16.78■□□□□ 0.28
CACNA1E-208ENST00000533229 PSMC2P35998 433 aaKnown RBP16.78■□□□□ 0.28
CACNA1E-208ENST00000533229 CXCL9Q07325 125 aa16.78■□□□□ 0.28
CACNA1E-208ENST00000533229 GRIPAP1Q4V328 841 aa16.78■□□□□ 0.28
CACNA1E-208ENST00000533229 ODR4Q5SWX8 454 aa16.78■□□□□ 0.28
CACNA1E-208ENST00000533229 FAM178BQ8IXR5 827 aa16.78■□□□□ 0.28
CACNA1E-208ENST00000533229 CLEC4DQ8WXI8 215 aa16.78■□□□□ 0.28
CACNA1E-208ENST00000533229 TEKT3Q9BXF9 490 aa16.78■□□□□ 0.28
CACNA1E-208ENST00000533229 DEFB129Q9H1M3 183 aa16.78■□□□□ 0.28
CACNA1E-208ENST00000533229 KCNH7Q9NS40 1196 aa16.78■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms