RNA–Protein interactions for RNA: ENST00000531352.5

ACER3-210, Transcript of alkaline ceramidase 3, humanhuman

TSL 1 (best)

Gene ACER3, Length 2,093 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACER3-210ENST00000531352 PTPAQ15257 358 aa13.09□□□□□ -0.31
ACER3-210ENST00000531352 ECM1Q16610 540 aa13.09□□□□□ -0.31
ACER3-210ENST00000531352 XKR3Q5GH77 459 aa13.09□□□□□ -0.31
ACER3-210ENST00000531352 C9orf50Q5SZB4 431 aa13.09□□□□□ -0.31
ACER3-210ENST00000531352 CATSPER3Q86XQ3 398 aa13.09□□□□□ -0.31
ACER3-210ENST00000531352 IGSF22Q8N9C0 903 aa13.09□□□□□ -0.31
ACER3-210ENST00000531352 CAGE1Q8TC20 777 aa13.09□□□□□ -0.31
ACER3-210ENST00000531352 UBE2OQ9C0C9 1292 aaKnown RBP13.09□□□□□ -0.31
ACER3-210ENST00000531352 FAM49AQ9H0Q0 323 aaPredicted RBP13.09□□□□□ -0.31
ACER3-210ENST00000531352 SEPT9Q9UHD8 586 aaPredicted RBP13.09□□□□□ -0.31
ACER3-210ENST00000531352 TCHHQ07283 1943 aa13.08□□□□□ -0.31
ACER3-210ENST00000531352 DDX11L8A8MPP1 907 aa13.08□□□□□ -0.32
ACER3-210ENST00000531352 C22orf31O95567 290 aa13.08□□□□□ -0.32
ACER3-210ENST00000531352 CHRNA1P02708 482 aa13.08□□□□□ -0.32
ACER3-210ENST00000531352 SELPP16109 830 aa13.08□□□□□ -0.32
ACER3-210ENST00000531352 MARCKSP29966 332 aaPredicted RBP13.08□□□□□ -0.32
ACER3-210ENST00000531352 TMEM62Q0P6H9 643 aa13.08□□□□□ -0.32
ACER3-210ENST00000531352 BFSP2Q13515 415 aa13.08□□□□□ -0.32
ACER3-210ENST00000531352 MTERF2Q49AM1 385 aa13.08□□□□□ -0.32
ACER3-210ENST00000531352 ZNF484Q5JVG2 852 aa13.08□□□□□ -0.32
ACER3-210ENST00000531352 DEFB128Q7Z7B8 93 aa13.08□□□□□ -0.32
ACER3-210ENST00000531352 NIFKQ9BYG3 293 aaKnown RBP13.08□□□□□ -0.32
ACER3-210ENST00000531352 NRBP2Q9NSY0 501 aa13.08□□□□□ -0.32
ACER3-210ENST00000531352 ARID2Q68CP9 1835 aa13.08□□□□□ -0.32
ACER3-210ENST00000531352 LAD1O00515 517 aa13.08□□□□□ -0.32
ACER3-210ENST00000531352 NBNO60934 754 aa13.08□□□□□ -0.32
ACER3-210ENST00000531352 BMP8BP34820 402 aa13.08□□□□□ -0.32
ACER3-210ENST00000531352 PRPHP41219 470 aa13.08□□□□□ -0.32
ACER3-210ENST00000531352 DNM1Q05193 864 aaKnown RBP13.08□□□□□ -0.32
ACER3-210ENST00000531352 DRP2Q13474 957 aa13.08□□□□□ -0.32
ACER3-210ENST00000531352 SHHQ15465 462 aa13.08□□□□□ -0.32
ACER3-210ENST00000531352 SPECC1Q5M775 1068 aa13.08□□□□□ -0.32
ACER3-210ENST00000531352 DTHD1Q6ZMT9 781 aa13.08□□□□□ -0.32
ACER3-210ENST00000531352 LRRC8DQ7L1W4 858 aa13.08□□□□□ -0.32
ACER3-210ENST00000531352 C4orf19Q8IY42 314 aa13.08□□□□□ -0.32
ACER3-210ENST00000531352 KIAA0319LQ8IZA0 1049 aa13.08□□□□□ -0.32
ACER3-210ENST00000531352 TMEM199Q8N511 208 aa13.08□□□□□ -0.32
ACER3-210ENST00000531352 RETREG2Q8NC44 543 aa13.08□□□□□ -0.32
ACER3-210ENST00000531352 FAM167AQ96KS9 214 aa13.08□□□□□ -0.32
ACER3-210ENST00000531352 BUD13Q9BRD0 619 aaKnown RBP eCLIP13.08□□□□□ -0.32
ACER3-210ENST00000531352 ZSCAN16Q9H4T2 348 aaPredicted RBP13.08□□□□□ -0.32
ACER3-210ENST00000531352 ZSWIM4Q9H7M6 989 aa13.08□□□□□ -0.32
ACER3-210ENST00000531352 PCDHA2Q9Y5H9 948 aa13.08□□□□□ -0.32
ACER3-210ENST00000531352 COL1A2P08123 1366 aa13.07□□□□□ -0.32
ACER3-210ENST00000531352 VWA3AA6NCI4 1184 aa13.07□□□□□ -0.32
ACER3-210ENST00000531352 YWHABP31946 246 aaKnown RBP13.07□□□□□ -0.32
ACER3-210ENST00000531352 MKRN4PQ13434 485 aaPredicted RBP13.07□□□□□ -0.32
ACER3-210ENST00000531352 PDIA5Q14554 519 aa13.07□□□□□ -0.32
ACER3-210ENST00000531352 TCTN1Q2MV58 587 aa13.07□□□□□ -0.32
ACER3-210ENST00000531352 TMEM240Q5SV17 173 aa13.07□□□□□ -0.32
ACER3-210ENST00000531352 TAF2Q6P1X5 1199 aa13.07□□□□□ -0.32
ACER3-210ENST00000531352 USP49Q70CQ1 688 aa13.07□□□□□ -0.32
ACER3-210ENST00000531352 LRRC71Q8N4P6 559 aa13.07□□□□□ -0.32
ACER3-210ENST00000531352 PIGOQ8TEQ8 1089 aa13.07□□□□□ -0.32
ACER3-210ENST00000531352 TNPO1Q92973 898 aaKnown RBP13.07□□□□□ -0.32
ACER3-210ENST00000531352 CLIC6Q96NY7 704 aa13.07□□□□□ -0.32
ACER3-210ENST00000531352 MMTAG2Q9BU76 263 aaKnown RBP13.07□□□□□ -0.32
ACER3-210ENST00000531352 LRWD1Q9UFC0 647 aa13.07□□□□□ -0.32
ACER3-210ENST00000531352 SMIM35A0A1B0GVV1 85 aa13.06□□□□□ -0.32
ACER3-210ENST00000531352 RSPH10B2B2RC85 870 aa13.06□□□□□ -0.32
ACER3-210ENST00000531352 RSPH10BP0C881 870 aa13.06□□□□□ -0.32
ACER3-210ENST00000531352 ANP32AP39687 249 aaKnown RBP13.06□□□□□ -0.32
ACER3-210ENST00000531352 CLCN3P51790 818 aa13.06□□□□□ -0.32
ACER3-210ENST00000531352 TMEM266Q2M3C6 531 aa13.06□□□□□ -0.32
ACER3-210ENST00000531352 POTEGQ6S5H5 508 aa13.06□□□□□ -0.32
ACER3-210ENST00000531352 ZNF365Q70YC5 407 aa13.06□□□□□ -0.32
ACER3-210ENST00000531352 RPAINQ86UA6 219 aa13.06□□□□□ -0.32
ACER3-210ENST00000531352 METTL13Q8N6R0 699 aa13.06□□□□□ -0.32
ACER3-210ENST00000531352 LINC01465Q8N7H1 131 aa13.06□□□□□ -0.32
ACER3-210ENST00000531352 CDHR5Q9HBB8 845 aa13.06□□□□□ -0.32
ACER3-210ENST00000531352 IL23AQ9NPF7 189 aa13.06□□□□□ -0.32
ACER3-210ENST00000531352 CYP26B1Q9NR63 512 aa13.06□□□□□ -0.32
ACER3-210ENST00000531352 BMP2KQ9NSY1 1161 aaPredicted RBP13.06□□□□□ -0.32
ACER3-210ENST00000531352 LYPLA2O95372 231 aa13.06□□□□□ -0.32
ACER3-210ENST00000531352 RPA1P27694 616 aa13.06□□□□□ -0.32
ACER3-210ENST00000531352 MGAT3Q09327 533 aa13.06□□□□□ -0.32
ACER3-210ENST00000531352 ARL6IP4Q66PJ3 421 aaKnown RBP13.06□□□□□ -0.32
ACER3-210ENST00000531352 EFCAB12Q6NXP0 572 aa13.06□□□□□ -0.32
ACER3-210ENST00000531352 CCDC155Q8N6L0 562 aa13.06□□□□□ -0.32
ACER3-210ENST00000531352 LRRC15Q8TF66 581 aa13.06□□□□□ -0.32
ACER3-210ENST00000531352 POLR3CQ9BUI4 534 aaPredicted RBP13.06□□□□□ -0.32
ACER3-210ENST00000531352 SUGCTQ9HAC7 445 aa13.06□□□□□ -0.32
ACER3-210ENST00000531352 CEP131Q9UPN4 1083 aa13.06□□□□□ -0.32
ACER3-210ENST00000531352 IGKV6-21A0A0C4DH24 114 aa13.05□□□□□ -0.32
ACER3-210ENST00000531352 VTNP04004 478 aa13.05□□□□□ -0.32
ACER3-210ENST00000531352 TBC1D8BQ0IIM8 1120 aa13.05□□□□□ -0.32
ACER3-210ENST00000531352 OTOP2Q7RTS6 562 aa13.05□□□□□ -0.32
ACER3-210ENST00000531352 ZNF668Q96K58 619 aaPredicted RBP13.05□□□□□ -0.32
ACER3-210ENST00000531352 CEP170P1Q96L14 293 aa13.05□□□□□ -0.32
ACER3-210ENST00000531352 PPP1R16BQ96T49 567 aa13.05□□□□□ -0.32
ACER3-210ENST00000531352 PLIN2Q99541 437 aa13.05□□□□□ -0.32
ACER3-210ENST00000531352 TUFT1Q9NNX1 390 aa13.05□□□□□ -0.32
ACER3-210ENST00000531352 CXXC1Q9P0U4 656 aaPredicted RBP13.05□□□□□ -0.32
ACER3-210ENST00000531352 COL6A3P12111 3177 aa13.05□□□□□ -0.32
ACER3-210ENST00000531352 PPIGQ13427 754 aaKnown RBP eCLIP13.04□□□□□ -0.32
ACER3-210ENST00000531352 FAM26DQ5JW98 314 aa13.04□□□□□ -0.32
ACER3-210ENST00000531352 KCNK18Q7Z418 384 aa13.04□□□□□ -0.32
ACER3-210ENST00000531352 TDHQ8IZJ6 230 aa13.04□□□□□ -0.32
ACER3-210ENST00000531352 NEK9Q8TD19 979 aa13.04□□□□□ -0.32
ACER3-210ENST00000531352 SNX29Q8TEQ0 813 aa13.04□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms