RNA–Protein interactions for RNA: ENST00000530961.5

CCS-206, Transcript of copper chaperone for superoxide dismutase, humanhuman

TSL 5

Gene CCS, Length 1,214 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCS-206ENST00000530961 DDX11L8A8MPP1 907 aa17.12■□□□□ 0.33
CCS-206ENST00000530961 PITPNM1O00562 1244 aa17.12■□□□□ 0.33
CCS-206ENST00000530961 TREHO43280 583 aa17.12■□□□□ 0.33
CCS-206ENST00000530961 STBD1O95210 358 aa17.12■□□□□ 0.33
CCS-206ENST00000530961 TIMP1P01033 207 aa17.12■□□□□ 0.33
CCS-206ENST00000530961 CYP2C9P11712 490 aa17.12■□□□□ 0.33
CCS-206ENST00000530961 XRCC6P12956 609 aaKnown RBP eCLIP17.12■□□□□ 0.33
CCS-206ENST00000530961 RAG1P15918 1043 aa17.12■□□□□ 0.33
CCS-206ENST00000530961 YWHABP31946 246 aaKnown RBP17.12■□□□□ 0.33
CCS-206ENST00000530961 IGBP1P78318 339 aa17.12■□□□□ 0.33
CCS-206ENST00000530961 CYP4A11Q02928 519 aa17.12■□□□□ 0.33
CCS-206ENST00000530961 CTTNQ14247 550 aaKnown RBP17.12■□□□□ 0.33
CCS-206ENST00000530961 MARCH8Q5T0T0 291 aa17.12■□□□□ 0.33
CCS-206ENST00000530961 KRT79Q5XKE5 535 aa17.12■□□□□ 0.33
CCS-206ENST00000530961 TRMT1LQ7Z2T5 733 aaKnown RBP17.12■□□□□ 0.33
CCS-206ENST00000530961 RETREG2Q8NC44 543 aa17.12■□□□□ 0.33
CCS-206ENST00000530961 NOC4LQ9BVI4 516 aaKnown RBP17.12■□□□□ 0.33
CCS-206ENST00000530961 FTOQ9C0B1 505 aaKnown RBP eCLIP17.12■□□□□ 0.33
CCS-206ENST00000530961 CFAP45Q9UL16 551 aa17.12■□□□□ 0.33
CCS-206ENST00000530961 RBM19Q9Y4C8 960 aaKnown RBP17.12■□□□□ 0.33
CCS-206ENST00000530961 ZBTB42B2RXF5 422 aa17.11■□□□□ 0.33
CCS-206ENST00000530961 MAGEB2O15479 319 aa17.11■□□□□ 0.33
CCS-206ENST00000530961 CAND2O75155 1236 aa17.11■□□□□ 0.33
CCS-206ENST00000530961 YEATS4O95619 227 aa17.11■□□□□ 0.33
CCS-206ENST00000530961 SPATA31C1P0DKV0 1188 aa17.11■□□□□ 0.33
CCS-206ENST00000530961 LONP1P36776 959 aaKnown RBP17.11■□□□□ 0.33
CCS-206ENST00000530961 CEBPZQ03701 1054 aaKnown RBP17.11■□□□□ 0.33
CCS-206ENST00000530961 RBL2Q08999 1139 aa17.11■□□□□ 0.33
CCS-206ENST00000530961 ANO5Q75V66 913 aa17.11■□□□□ 0.33
CCS-206ENST00000530961 RPAINQ86UA6 219 aa17.11■□□□□ 0.33
CCS-206ENST00000530961 RSPH3Q86UC2 560 aa17.11■□□□□ 0.33
CCS-206ENST00000530961 CATSPER3Q86XQ3 398 aa17.11■□□□□ 0.33
CCS-206ENST00000530961 EXOC8Q8IYI6 725 aa17.11■□□□□ 0.33
CCS-206ENST00000530961 KCTD17Q8N5Z5 321 aa17.11■□□□□ 0.33
CCS-206ENST00000530961 LBHD1Q9BQE6 289 aaPredicted RBP17.11■□□□□ 0.33
CCS-206ENST00000530961 WRAP73Q9P2S5 460 aaPredicted RBP17.11■□□□□ 0.33
CCS-206ENST00000530961 TFIP11Q9UBB9 837 aaKnown RBP17.11■□□□□ 0.33
CCS-206ENST00000530961 SEPT9Q9UHD8 586 aaPredicted RBP17.11■□□□□ 0.33
CCS-206ENST00000530961 CIZ1Q9ULV3 898 aaPredicted RBP17.11■□□□□ 0.33
CCS-206ENST00000530961 PCDHA2Q9Y5H9 948 aa17.11■□□□□ 0.33
CCS-206ENST00000530961 SRPRBQ9Y5M8 271 aaKnown RBP17.11■□□□□ 0.33
CCS-206ENST00000530961 LAMA2P24043 3122 aaKnown RBP17.1■□□□□ 0.33
CCS-206ENST00000530961 CACNA1AO00555 2505 aa17.1■□□□□ 0.33
CCS-206ENST00000530961 SLC26A4O43511 780 aa17.1■□□□□ 0.33
CCS-206ENST00000530961 PPP6R2O75170 966 aa17.1■□□□□ 0.33
CCS-206ENST00000530961 KLRC1P26715 233 aa17.1■□□□□ 0.33
CCS-206ENST00000530961 CCT6AP40227 531 aaKnown RBP17.1■□□□□ 0.33
CCS-206ENST00000530961 STK38Q15208 465 aa17.1■□□□□ 0.33
CCS-206ENST00000530961 TARBP2Q15633 366 aaKnown RBP17.1■□□□□ 0.33
CCS-206ENST00000530961 MTHFD1LQ6UB35 978 aa17.1■□□□□ 0.33
CCS-206ENST00000530961 LINC00301Q8NCQ3 95 aa17.1■□□□□ 0.33
CCS-206ENST00000530961 NACC1Q96RE7 527 aa17.1■□□□□ 0.33
CCS-206ENST00000530961 TSHZ2Q9NRE2 1034 aa17.1■□□□□ 0.33
CCS-206ENST00000530961 ANKEF1Q9NU02 776 aa17.1■□□□□ 0.33
CCS-206ENST00000530961 HCN4Q9Y3Q4 1203 aa17.1■□□□□ 0.33
CCS-206ENST00000530961 KIAA1217Q5T5P2 1943 aa17.09■□□□□ 0.33
CCS-206ENST00000530961 SMIM35A0A1B0GVV1 85 aa17.09■□□□□ 0.33
CCS-206ENST00000530961 MED24O75448 989 aa17.09■□□□□ 0.33
CCS-206ENST00000530961 PARNO95453 639 aaKnown RBP17.09■□□□□ 0.33
CCS-206ENST00000530961 MARCKSP29966 332 aaPredicted RBP17.09■□□□□ 0.33
CCS-206ENST00000530961 TBC1D8BQ0IIM8 1120 aa17.09■□□□□ 0.33
CCS-206ENST00000530961 TRIM71Q2Q1W2 868 aaKnown RBP17.09■□□□□ 0.33
CCS-206ENST00000530961 MFSD5Q6N075 450 aa17.09■□□□□ 0.33
CCS-206ENST00000530961 NME8Q8N427 588 aa17.09■□□□□ 0.33
CCS-206ENST00000530961 TMEM199Q8N511 208 aa17.09■□□□□ 0.33
CCS-206ENST00000530961 KRI1Q8N9T8 703 aaKnown RBP17.09■□□□□ 0.33
CCS-206ENST00000530961 SNX29Q8TEQ0 813 aa17.09■□□□□ 0.33
CCS-206ENST00000530961 TRAPPC12Q8WVT3 735 aa17.09■□□□□ 0.33
CCS-206ENST00000530961 DHX38Q92620 1227 aaKnown RBP17.09■□□□□ 0.33
CCS-206ENST00000530961 CEP170P1Q96L14 293 aa17.09■□□□□ 0.33
CCS-206ENST00000530961 JPH2Q9BR39 696 aaPredicted RBP17.09■□□□□ 0.33
CCS-206ENST00000530961 PPP1R12CQ9BZL4 782 aa17.09■□□□□ 0.33
CCS-206ENST00000530961 CYP26B1Q9NR63 512 aa17.09■□□□□ 0.33
CCS-206ENST00000530961 FBXO2Q9UK22 296 aaPredicted RBP17.09■□□□□ 0.33
CCS-206ENST00000530961 SPTLC2O15270 562 aa17.08■□□□□ 0.32
CCS-206ENST00000530961 C22orf31O95567 290 aa17.08■□□□□ 0.32
CCS-206ENST00000530961 CKBP12277 381 aa17.08■□□□□ 0.32
CCS-206ENST00000530961 SELPP16109 830 aa17.08■□□□□ 0.32
CCS-206ENST00000530961 ITGB8P26012 769 aa17.08■□□□□ 0.32
CCS-206ENST00000530961 TMOD1P28289 359 aa17.08■□□□□ 0.32
CCS-206ENST00000530961 CYP2C18P33260 490 aa17.08■□□□□ 0.32
CCS-206ENST00000530961 THPOP40225 353 aa17.08■□□□□ 0.32
CCS-206ENST00000530961 UBA7P41226 1012 aa17.08■□□□□ 0.32
CCS-206ENST00000530961 DNM1Q05193 864 aaKnown RBP17.08■□□□□ 0.32
CCS-206ENST00000530961 FOXD4L6Q3SYB3 417 aaPredicted RBP17.08■□□□□ 0.32
CCS-206ENST00000530961 MTERF2Q49AM1 385 aa17.08■□□□□ 0.32
CCS-206ENST00000530961 FOXD4L3Q6VB84 417 aaPredicted RBP17.08■□□□□ 0.32
CCS-206ENST00000530961 ZNF710Q8N1W2 664 aa17.08■□□□□ 0.32
CCS-206ENST00000530961 KCNG4Q8TDN1 519 aa17.08■□□□□ 0.32
CCS-206ENST00000530961 KDM3AQ9Y4C1 1321 aa17.07■□□□□ 0.32
CCS-206ENST00000530961 MAFO75444 373 aaPredicted RBP17.07■□□□□ 0.32
CCS-206ENST00000530961 IQCF3P0C7M6 154 aa17.07■□□□□ 0.32
CCS-206ENST00000530961 FOSL2P15408 326 aa17.07■□□□□ 0.32
CCS-206ENST00000530961 CDC25AP30304 524 aa17.07■□□□□ 0.32
CCS-206ENST00000530961 RFC5P40937 340 aa17.07■□□□□ 0.32
CCS-206ENST00000530961 KRT85P78386 507 aa17.07■□□□□ 0.32
CCS-206ENST00000530961 XKR9Q5GH70 373 aa17.07■□□□□ 0.32
CCS-206ENST00000530961 RUFY4Q6ZNE9 571 aa17.07■□□□□ 0.32
CCS-206ENST00000530961 METTL13Q8N6R0 699 aa17.07■□□□□ 0.32
CCS-206ENST00000530961 BADQ92934 168 aa17.07■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms