RNA–Protein interactions for RNA: ENST00000530618.1

SSBP3-213, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 4

Gene SSBP3, Length 524 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-213ENST00000530618 WDR87Q6ZQQ6 2873 aa5.36□□□□□ -1.55
SSBP3-213ENST00000530618 MEIS1O00470 390 aa5.36□□□□□ -1.55
SSBP3-213ENST00000530618 BACH1O14867 736 aa5.36□□□□□ -1.55
SSBP3-213ENST00000530618 CUTAO60888 179 aa5.36□□□□□ -1.55
SSBP3-213ENST00000530618 NBNO60934 754 aa5.36□□□□□ -1.55
SSBP3-213ENST00000530618 F2P00734 622 aa5.36□□□□□ -1.55
SSBP3-213ENST00000530618 RPLP2P05387 115 aaKnown RBP5.36□□□□□ -1.55
SSBP3-213ENST00000530618 PFKMP08237 780 aa5.36□□□□□ -1.55
SSBP3-213ENST00000530618 MMP3P08254 477 aa5.36□□□□□ -1.55
SSBP3-213ENST00000530618 MYL3P08590 195 aa5.36□□□□□ -1.55
SSBP3-213ENST00000530618 GNAT1P11488 350 aa5.36□□□□□ -1.55
SSBP3-213ENST00000530618 ATP2A2P16615 1042 aaKnown RBP5.36□□□□□ -1.55
SSBP3-213ENST00000530618 NASPP49321 788 aaPredicted RBP5.36□□□□□ -1.55
SSBP3-213ENST00000530618 KCNQ1P51787 676 aa5.36□□□□□ -1.55
SSBP3-213ENST00000530618 WDR5P61964 334 aaKnown RBP5.36□□□□□ -1.55
SSBP3-213ENST00000530618 DEFB103AP81534 67 aa5.36□□□□□ -1.55
SSBP3-213ENST00000530618 ATP2C1P98194 919 aaPredicted RBP5.36□□□□□ -1.55
SSBP3-213ENST00000530618 AMPD3Q01432 767 aa5.36□□□□□ -1.55
SSBP3-213ENST00000530618 CEBPZQ03701 1054 aaKnown RBP5.36□□□□□ -1.55
SSBP3-213ENST00000530618 DNM1Q05193 864 aaKnown RBP5.36□□□□□ -1.55
SSBP3-213ENST00000530618 PTPN11Q06124 597 aaPredicted RBP5.36□□□□□ -1.55
SSBP3-213ENST00000530618 PTGDRQ13258 359 aa5.36□□□□□ -1.55
SSBP3-213ENST00000530618 PDIA5Q14554 519 aa5.36□□□□□ -1.55
SSBP3-213ENST00000530618 NPY5RQ15761 445 aa5.36□□□□□ -1.55
SSBP3-213ENST00000530618 CCDC85BQ15834 202 aaPredicted RBP5.36□□□□□ -1.55
SSBP3-213ENST00000530618 DGKDQ16760 1214 aa5.36□□□□□ -1.55
SSBP3-213ENST00000530618 PPP2R2DQ66LE6 453 aa5.36□□□□□ -1.55
SSBP3-213ENST00000530618 NCAPH2Q6IBW4 605 aa5.36□□□□□ -1.55
SSBP3-213ENST00000530618 OTUD6AQ7L8S5 288 aa5.36□□□□□ -1.55
SSBP3-213ENST00000530618 MIER3Q7Z3K6 550 aa5.36□□□□□ -1.55
SSBP3-213ENST00000530618 HERC6Q8IVU3 1022 aa5.36□□□□□ -1.55
SSBP3-213ENST00000530618 CKAP2LQ8IYA6 745 aa5.36□□□□□ -1.55
SSBP3-213ENST00000530618 CEP57L1Q8IYX8 460 aa5.36□□□□□ -1.55
SSBP3-213ENST00000530618 ZNF579Q8NAF0 562 aaKnown RBP5.36□□□□□ -1.55
SSBP3-213ENST00000530618 PPTC7Q8NI37 304 aa5.36□□□□□ -1.55
SSBP3-213ENST00000530618 AFG1LQ8WV93 481 aa5.36□□□□□ -1.55
SSBP3-213ENST00000530618 PPM1EQ8WY54 764 aa5.36□□□□□ -1.55
SSBP3-213ENST00000530618 SEPT1Q8WYJ6 367 aa5.36□□□□□ -1.55
SSBP3-213ENST00000530618 SYMPKQ92797 1274 aaKnown RBP5.36□□□□□ -1.55
SSBP3-213ENST00000530618 CCDC47Q96A33 483 aaKnown RBP5.36□□□□□ -1.55
SSBP3-213ENST00000530618 EMID1Q96A84 441 aaPredicted RBP5.36□□□□□ -1.55
SSBP3-213ENST00000530618 VTI1AQ96AJ9 217 aa5.36□□□□□ -1.55
SSBP3-213ENST00000530618 PGBD1Q96JS3 809 aa5.36□□□□□ -1.55
SSBP3-213ENST00000530618 SPATA33Q96N06 139 aa5.36□□□□□ -1.55
SSBP3-213ENST00000530618 GAS2L1Q99501 681 aaPredicted RBP5.36□□□□□ -1.55
SSBP3-213ENST00000530618 JPH2Q9BR39 696 aaPredicted RBP5.36□□□□□ -1.55
SSBP3-213ENST00000530618 ANP32EQ9BTT0 268 aa5.36□□□□□ -1.55
SSBP3-213ENST00000530618 BCAS3Q9H6U6 928 aa5.36□□□□□ -1.55
SSBP3-213ENST00000530618 TTC12Q9H892 705 aaPredicted RBP5.36□□□□□ -1.55
SSBP3-213ENST00000530618 MAGEF1Q9HAY2 307 aa5.36□□□□□ -1.55
SSBP3-213ENST00000530618 AGO4Q9HCK5 861 aaKnown RBP5.36□□□□□ -1.55
SSBP3-213ENST00000530618 CD320Q9NPF0 282 aa5.36□□□□□ -1.55
SSBP3-213ENST00000530618 C11orf16Q9NQ32 467 aa5.36□□□□□ -1.55
SSBP3-213ENST00000530618 EIF4ENIF1Q9NRA8 985 aaKnown RBP5.36□□□□□ -1.55
SSBP3-213ENST00000530618 KCNH7Q9NS40 1196 aa5.36□□□□□ -1.55
SSBP3-213ENST00000530618 GJB4Q9NTQ9 266 aa5.36□□□□□ -1.55
SSBP3-213ENST00000530618 SLC9A2Q9UBY0 812 aa5.36□□□□□ -1.55
SSBP3-213ENST00000530618 LRWD1Q9UFC0 647 aa5.36□□□□□ -1.55
SSBP3-213ENST00000530618 GTF2IRD1Q9UHL9 959 aa5.36□□□□□ -1.55
SSBP3-213ENST00000530618 USP25Q9UHP3 1055 aa5.36□□□□□ -1.55
SSBP3-213ENST00000530618 MSRAQ9UJ68 235 aa5.36□□□□□ -1.55
SSBP3-213ENST00000530618 METRNQ9UJH8 293 aa5.36□□□□□ -1.55
SSBP3-213ENST00000530618 DDX41Q9UJV9 622 aaKnown RBP5.36□□□□□ -1.55
SSBP3-213ENST00000530618 TELO2Q9Y4R8 837 aa5.36□□□□□ -1.55
SSBP3-213ENST00000530618 PPME1Q9Y570 386 aa5.36□□□□□ -1.55
SSBP3-213ENST00000530618 SLC4A7Q9Y6M7 1214 aa5.36□□□□□ -1.55
SSBP3-213ENST00000530618 FNDC1Q4ZHG4 1894 aaPredicted RBP5.36□□□□□ -1.55
SSBP3-213ENST00000530618 ZDBF2Q9HCK1 2354 aa5.36□□□□□ -1.55
SSBP3-213ENST00000530618 CFAP54Q96N23 3096 aa5.35□□□□□ -1.55
SSBP3-213ENST00000530618 LOC100996750A0A140TA64 210 aa5.35□□□□□ -1.55
SSBP3-213ENST00000530618 VWA3AA6NCI4 1184 aa5.35□□□□□ -1.55
SSBP3-213ENST00000530618 SPATA31C2B4DYI2 1134 aa5.35□□□□□ -1.55
SSBP3-213ENST00000530618 KIF28PB7ZC32 967 aa5.35□□□□□ -1.55
SSBP3-213ENST00000530618 FAM86B1E9PN63 330 aa5.35□□□□□ -1.55
SSBP3-213ENST00000530618 TLL1O43897 1013 aa5.35□□□□□ -1.55
SSBP3-213ENST00000530618 TDP2O95551 362 aa5.35□□□□□ -1.55
SSBP3-213ENST00000530618 GGPS1O95749 300 aa5.35□□□□□ -1.55
SSBP3-213ENST00000530618 MBD3O95983 291 aa5.35□□□□□ -1.55
SSBP3-213ENST00000530618 P4HBP07237 508 aaKnown RBP5.35□□□□□ -1.55
SSBP3-213ENST00000530618 FAM86B2P0C5J1 330 aa5.35□□□□□ -1.55
SSBP3-213ENST00000530618 LINC00271P0C7V0 271 aa5.35□□□□□ -1.55
SSBP3-213ENST00000530618 ITGB5P18084 799 aa5.35□□□□□ -1.55
SSBP3-213ENST00000530618 COL9A1P20849 921 aa5.35□□□□□ -1.55
SSBP3-213ENST00000530618 RFC2P35250 354 aa5.35□□□□□ -1.55
SSBP3-213ENST00000530618 DDIT3P35638 169 aa5.35□□□□□ -1.55
SSBP3-213ENST00000530618 TECP42680 631 aa5.35□□□□□ -1.55
SSBP3-213ENST00000530618 TXKP42681 527 aa5.35□□□□□ -1.55
SSBP3-213ENST00000530618 UBE2HP62256 183 aa5.35□□□□□ -1.55
SSBP3-213ENST00000530618 MRPS5P82675 430 aaKnown RBP5.35□□□□□ -1.55
SSBP3-213ENST00000530618 ZNF200P98182 395 aaPredicted RBP5.35□□□□□ -1.55
SSBP3-213ENST00000530618 SP2Q02086 613 aa5.35□□□□□ -1.55
SSBP3-213ENST00000530618 SEMA3FQ13275 785 aa5.35□□□□□ -1.55
SSBP3-213ENST00000530618 GRB10Q13322 594 aa5.35□□□□□ -1.55
SSBP3-213ENST00000530618 PPP2R5CQ13362 524 aa5.35□□□□□ -1.55
SSBP3-213ENST00000530618 SLC39A14Q15043 492 aa5.35□□□□□ -1.55
SSBP3-213ENST00000530618 LY6KQ17RY6 165 aa5.35□□□□□ -1.55
SSBP3-213ENST00000530618 FOXD4L6Q3SYB3 417 aaPredicted RBP5.35□□□□□ -1.55
SSBP3-213ENST00000530618 CELF3Q5SZQ8 465 aaKnown RBP5.35□□□□□ -1.55
SSBP3-213ENST00000530618 KANK3Q6NY19 840 aa5.35□□□□□ -1.55
SSBP3-213ENST00000530618 FOXD4L3Q6VB84 417 aaPredicted RBP5.35□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms