RNA–Protein interactions for RNA: ENST00000529898.1

CTR9-205, Transcript of CTR9 homolog, Paf1/RNA polymerase II complex component, human

TSL 2

Gene CTR9, Length 594 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CTR9-205	ENST00000529898	PTPN18	Q99952	460 aa		4.93	□□□□□ -1.62
CTR9-205	ENST00000529898	CATSPERZ	Q9NTU4	200 aa		4.93	□□□□□ -1.62
CTR9-205	ENST00000529898	RBM28	Q9NW13	759 aa	Known RBP	4.93	□□□□□ -1.62
CTR9-205	ENST00000529898	SNTG2	Q9NY99	539 aa		4.93	□□□□□ -1.62
CTR9-205	ENST00000529898	BTBD7	Q9P203	1132 aa		4.93	□□□□□ -1.62
CTR9-205	ENST00000529898	PCDHA9	Q9Y5H5	950 aa		4.93	□□□□□ -1.62
CTR9-205	ENST00000529898	ATP23	Q9Y6H3	246 aa		4.93	□□□□□ -1.62
CTR9-205	ENST00000529898	CFAP65	Q6ZU64	1925 aa	Known RBP	4.92	□□□□□ -1.62
CTR9-205	ENST00000529898	LOC107983988	A0A1B0GUW6	1196 aa	Predicted RBP	4.92	□□□□□ -1.62
CTR9-205	ENST00000529898	CRTAM	O95727	393 aa		4.92	□□□□□ -1.62
CTR9-205	ENST00000529898	AOAH	P28039	575 aa		4.92	□□□□□ -1.62
CTR9-205	ENST00000529898	SSR1	P43307	286 aa	Known RBP	4.92	□□□□□ -1.62
CTR9-205	ENST00000529898	JAM2	P57087	298 aa		4.92	□□□□□ -1.62
CTR9-205	ENST00000529898	R3HDM1	Q15032	1099 aa	Known RBP	4.92	□□□□□ -1.62
CTR9-205	ENST00000529898	CRY1	Q16526	586 aa		4.92	□□□□□ -1.62
CTR9-205	ENST00000529898	FAM47C	Q5HY64	1035 aa		4.92	□□□□□ -1.62
CTR9-205	ENST00000529898	DNTTIP2	Q5QJE6	756 aa	Known RBP	4.92	□□□□□ -1.62
CTR9-205	ENST00000529898	DPP8	Q6V1X1	898 aa	Predicted RBP	4.92	□□□□□ -1.62
CTR9-205	ENST00000529898	RALYL	Q86SE5	291 aa	Known RBP	4.92	□□□□□ -1.62
CTR9-205	ENST00000529898	PTRH1	Q86Y79	214 aa	Known RBP	4.92	□□□□□ -1.62
CTR9-205	ENST00000529898	EGFL6	Q8IUX8	553 aa		4.92	□□□□□ -1.62
CTR9-205	ENST00000529898	CHST13	Q8NET6	341 aa		4.92	□□□□□ -1.62
CTR9-205	ENST00000529898	WNK4	Q96J92	1243 aa		4.92	□□□□□ -1.62
CTR9-205	ENST00000529898	TACO1	Q9BSH4	297 aa	Known RBP	4.92	□□□□□ -1.62
CTR9-205	ENST00000529898	SEMA4A	Q9H3S1	761 aa		4.92	□□□□□ -1.62
CTR9-205	ENST00000529898	SLC39A2	Q9NP94	309 aa		4.92	□□□□□ -1.62
CTR9-205	ENST00000529898	GALNT8	Q9NY28	637 aa		4.92	□□□□□ -1.62
CTR9-205	ENST00000529898	RAI14	Q9P0K7	980 aa		4.92	□□□□□ -1.62
CTR9-205	ENST00000529898	ST6GALNAC2	Q9UJ37	374 aa		4.92	□□□□□ -1.62
CTR9-205	ENST00000529898	TESMIN	Q9Y4I5	508 aa		4.92	□□□□□ -1.62
CTR9-205	ENST00000529898	BIVM-ERCC5	R4GMW8	1640 aa		4.92	□□□□□ -1.62
CTR9-205	ENST00000529898	BICRA	Q9NZM4	1560 aa		4.91	□□□□□ -1.62
CTR9-205	ENST00000529898	NPTXR	O95502	500 aa		4.91	□□□□□ -1.62
CTR9-205	ENST00000529898	MPIG6B	O95866	241 aa		4.91	□□□□□ -1.62
CTR9-205	ENST00000529898	KCNA6	P17658	529 aa		4.91	□□□□□ -1.62
CTR9-205	ENST00000529898	USP10	Q14694	798 aa	Known RBP	4.91	□□□□□ -1.62
CTR9-205	ENST00000529898	SEC23A	Q15436	765 aa		4.91	□□□□□ -1.62
CTR9-205	ENST00000529898	SLC7A14	Q8TBB6	771 aa		4.91	□□□□□ -1.62
CTR9-205	ENST00000529898	CDK5RAP1	Q96SZ6	601 aa	Known RBP	4.91	□□□□□ -1.62
CTR9-205	ENST00000529898	CARD11	Q9BXL7	1154 aa		4.91	□□□□□ -1.62
CTR9-205	ENST00000529898	CELF4	Q9BZC1	486 aa	Known RBP	4.91	□□□□□ -1.62
CTR9-205	ENST00000529898	KLC2	Q9H0B6	622 aa		4.91	□□□□□ -1.62
CTR9-205	ENST00000529898	SLC52A2	Q9HAB3	445 aa		4.91	□□□□□ -1.62
CTR9-205	ENST00000529898	RIC8B	Q9NVN3	520 aa		4.91	□□□□□ -1.62
CTR9-205	ENST00000529898	PPP1R1B	Q9UD71	204 aa	Predicted RBP	4.91	□□□□□ -1.62
CTR9-205	ENST00000529898	BAZ1B	Q9UIG0	1483 aa	Known RBP	4.9	□□□□□ -1.62
CTR9-205	ENST00000529898	CCDC66	A2RUB6	948 aa		4.9	□□□□□ -1.63
CTR9-205	ENST00000529898	CCDC85C	A6NKD9	419 aa		4.9	□□□□□ -1.63
CTR9-205	ENST00000529898	ZNF623	O75123	536 aa		4.9	□□□□□ -1.63
CTR9-205	ENST00000529898	PTGS1	P23219	599 aa		4.9	□□□□□ -1.63
CTR9-205	ENST00000529898	CALR	P27797	417 aa	Known RBP	4.9	□□□□□ -1.63
CTR9-205	ENST00000529898	ETV4	P43268	484 aa		4.9	□□□□□ -1.63
CTR9-205	ENST00000529898	ST5	P78524	1137 aa		4.9	□□□□□ -1.63
CTR9-205	ENST00000529898	NOSTRIN	Q8IVI9	506 aa		4.9	□□□□□ -1.63
CTR9-205	ENST00000529898	OTUD6B	Q8N6M0	293 aa		4.9	□□□□□ -1.63
CTR9-205	ENST00000529898		Q8TCH9	128 aa		4.9	□□□□□ -1.63
CTR9-205	ENST00000529898	THAP3	Q8WTV1	239 aa	Predicted RBP	4.9	□□□□□ -1.63
CTR9-205	ENST00000529898	DLG3	Q92796	817 aa		4.9	□□□□□ -1.63
CTR9-205	ENST00000529898	SCLY	Q96I15	445 aa		4.9	□□□□□ -1.63
CTR9-205	ENST00000529898	DNAJC7	Q99615	494 aa		4.9	□□□□□ -1.63
CTR9-205	ENST00000529898	BTBD2	Q9BX70	525 aa		4.9	□□□□□ -1.63
CTR9-205	ENST00000529898	MRPL4	Q9BYD3	311 aa	Known RBP	4.9	□□□□□ -1.63
CTR9-205	ENST00000529898	ZDHHC5	Q9C0B5	715 aa		4.9	□□□□□ -1.63
CTR9-205	ENST00000529898	TMPRSS5	Q9H3S3	457 aa		4.9	□□□□□ -1.63
CTR9-205	ENST00000529898	MSL2	Q9HCI7	577 aa		4.9	□□□□□ -1.63
CTR9-205	ENST00000529898	TERF2IP	Q9NYB0	399 aa		4.9	□□□□□ -1.63
CTR9-205	ENST00000529898	FBXO10	Q9UK96	956 aa		4.9	□□□□□ -1.63
CTR9-205	ENST00000529898	CEP164	Q9UPV0	1460 aa		4.89	□□□□□ -1.63
CTR9-205	ENST00000529898	MAF	O75444	373 aa	Predicted RBP	4.89	□□□□□ -1.63
CTR9-205	ENST00000529898	ZNF888	P0CJ79	500 aa	Predicted RBP	4.89	□□□□□ -1.63
CTR9-205	ENST00000529898	SRGAP2C	P0DJJ0	459 aa		4.89	□□□□□ -1.63
CTR9-205	ENST00000529898	SDHA	P31040	664 aa		4.89	□□□□□ -1.63
CTR9-205	ENST00000529898	SELENOP	P49908	381 aa		4.89	□□□□□ -1.63
CTR9-205	ENST00000529898	NFYC	Q13952	458 aa		4.89	□□□□□ -1.63
CTR9-205	ENST00000529898	EIF4H	Q15056	248 aa	Known RBP	4.89	□□□□□ -1.63
CTR9-205	ENST00000529898	KANK2	Q63ZY3	851 aa		4.89	□□□□□ -1.63
CTR9-205	ENST00000529898	TRIM68	Q6AZZ1	485 aa		4.89	□□□□□ -1.63
CTR9-205	ENST00000529898	TSHZ1	Q6ZSZ6	1077 aa		4.89	□□□□□ -1.63
CTR9-205	ENST00000529898	OVCH1	Q7RTY7	1134 aa		4.89	□□□□□ -1.63
CTR9-205	ENST00000529898	ZC3H7A	Q8IWR0	971 aa	Known RBP	4.89	□□□□□ -1.63
CTR9-205	ENST00000529898	EXOC8	Q8IYI6	725 aa		4.89	□□□□□ -1.63
CTR9-205	ENST00000529898	ZSWIM2	Q8NEG5	633 aa		4.89	□□□□□ -1.63
CTR9-205	ENST00000529898	SCYL1	Q96KG9	808 aa		4.89	□□□□□ -1.63
CTR9-205	ENST00000529898	MAGEB10	Q96LZ2	347 aa	Predicted RBP	4.89	□□□□□ -1.63
CTR9-205	ENST00000529898	AMN	Q9BXJ7	453 aa		4.89	□□□□□ -1.63
CTR9-205	ENST00000529898	JADE2	Q9NQC1	790 aa		4.89	□□□□□ -1.63
CTR9-205	ENST00000529898	INCENP	Q9NQS7	918 aa		4.89	□□□□□ -1.63
CTR9-205	ENST00000529898	ARHGAP28	Q9P2N2	729 aa		4.89	□□□□□ -1.63
CTR9-205	ENST00000529898	PRDM2	Q13029	1718 aa		4.89	□□□□□ -1.63
CTR9-205	ENST00000529898	TCRBV16S1A1N1	A0A5B0	115 aa		4.88	□□□□□ -1.63
CTR9-205	ENST00000529898	IL13RA1	P78552	427 aa		4.88	□□□□□ -1.63
CTR9-205	ENST00000529898	ZXDA	P98168	799 aa		4.88	□□□□□ -1.63
CTR9-205	ENST00000529898	ZKSCAN8	Q15776	578 aa	Predicted RBP	4.88	□□□□□ -1.63
CTR9-205	ENST00000529898	TCTN3	Q6NUS6	607 aa		4.88	□□□□□ -1.63
CTR9-205	ENST00000529898	OTOP1	Q7RTM1	612 aa		4.88	□□□□□ -1.63
CTR9-205	ENST00000529898	IFNL2	Q8IZJ0	200 aa		4.88	□□□□□ -1.63
CTR9-205	ENST00000529898	NEIL1	Q96FI4	390 aa	Predicted RBP	4.88	□□□□□ -1.63
CTR9-205	ENST00000529898	LMF1	Q96S06	567 aa		4.88	□□□□□ -1.63
CTR9-205	ENST00000529898	TRIM39	Q9HCM9	518 aa		4.88	□□□□□ -1.63
CTR9-205	ENST00000529898	KCNH7	Q9NS40	1196 aa		4.88	□□□□□ -1.63

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