RNA–Protein interactions for RNA: ENST00000529565.1

CASP4-207, Transcript of caspase 4, humanhuman

TSL 2

Gene CASP4, Length 4,745 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASP4-207ENST00000529565 PRR29P0C7W0 189 aa5.08□□□□□ -1.6
CASP4-207ENST00000529565 SHMT1P34896 483 aa5.08□□□□□ -1.6
CASP4-207ENST00000529565 AP3M2P53677 418 aa5.08□□□□□ -1.6
CASP4-207ENST00000529565 BACE1P56817 501 aa5.08□□□□□ -1.6
CASP4-207ENST00000529565 DPYDQ12882 1025 aa5.08□□□□□ -1.6
CASP4-207ENST00000529565 MTMR3Q13615 1198 aa5.08□□□□□ -1.6
CASP4-207ENST00000529565 APOBEC3HQ6NTF7 200 aaKnown RBP5.08□□□□□ -1.6
CASP4-207ENST00000529565 C17orf53Q8N3J3 647 aaPredicted RBP5.08□□□□□ -1.6
CASP4-207ENST00000529565 GABPB2Q8TAK5 448 aaPredicted RBP5.08□□□□□ -1.6
CASP4-207ENST00000529565 EEF2KMTQ96G04 330 aa5.08□□□□□ -1.6
CASP4-207ENST00000529565 PPP1R13BQ96KQ4 1090 aa5.08□□□□□ -1.6
CASP4-207ENST00000529565 POLR3CQ9BUI4 534 aaPredicted RBP5.08□□□□□ -1.6
CASP4-207ENST00000529565 ST7Q9NRC1 585 aa5.08□□□□□ -1.6
CASP4-207ENST00000529565 NRBP1Q9UHY1 535 aa5.08□□□□□ -1.6
CASP4-207ENST00000529565 USTQ9Y2C2 406 aa5.08□□□□□ -1.6
CASP4-207ENST00000529565 SETD1AO15047 1707 aaKnown RBP5.08□□□□□ -1.6
CASP4-207ENST00000529565 DLG5Q8TDM6 1919 aa5.08□□□□□ -1.6
CASP4-207ENST00000529565 A0A087WWV3 80 aa5.08□□□□□ -1.6
CASP4-207ENST00000529565 DDTLA6NHG4 134 aaPredicted RBP5.08□□□□□ -1.6
CASP4-207ENST00000529565 A6NNZ2 444 aa5.08□□□□□ -1.6
CASP4-207ENST00000529565 CLDN3O15551 220 aa5.08□□□□□ -1.6
CASP4-207ENST00000529565 RNF8O76064 485 aa5.08□□□□□ -1.6
CASP4-207ENST00000529565 SRGAP2CP0DJJ0 459 aa5.08□□□□□ -1.6
CASP4-207ENST00000529565 RPA1P27694 616 aa5.08□□□□□ -1.6
CASP4-207ENST00000529565 GBP1P32455 592 aa5.08□□□□□ -1.6
CASP4-207ENST00000529565 SNRPFP62306 86 aaKnown RBP5.08□□□□□ -1.6
CASP4-207ENST00000529565 CBX1P83916 185 aa5.08□□□□□ -1.6
CASP4-207ENST00000529565 TFAMQ00059 246 aaKnown RBP5.08□□□□□ -1.6
CASP4-207ENST00000529565 BRD3Q15059 726 aa5.08□□□□□ -1.6
CASP4-207ENST00000529565 TUBB8Q3ZCM7 444 aa5.08□□□□□ -1.6
CASP4-207ENST00000529565 C9orf131Q5VYM1 1079 aa5.08□□□□□ -1.6
CASP4-207ENST00000529565 PDZD4Q76G19 769 aaPredicted RBP5.08□□□□□ -1.6
CASP4-207ENST00000529565 GPC2Q8N158 579 aa5.08□□□□□ -1.6
CASP4-207ENST00000529565 TTC39CQ8N584 583 aa5.08□□□□□ -1.6
CASP4-207ENST00000529565 RNF169Q8NCN4 708 aa5.08□□□□□ -1.6
CASP4-207ENST00000529565 SPATA33Q96N06 139 aa5.08□□□□□ -1.6
CASP4-207ENST00000529565 MED10Q9BTT4 135 aa5.08□□□□□ -1.6
CASP4-207ENST00000529565 KIAA1683Q9H0B3 1180 aa5.08□□□□□ -1.6
CASP4-207ENST00000529565 RRAGDQ9NQL2 400 aaPredicted RBP5.08□□□□□ -1.6
CASP4-207ENST00000529565 TOPORSQ9NS56 1045 aaPredicted RBP5.08□□□□□ -1.6
CASP4-207ENST00000529565 TXNDC16Q9P2K2 825 aa5.08□□□□□ -1.6
CASP4-207ENST00000529565 NUB1Q9Y5A7 615 aa5.08□□□□□ -1.6
CASP4-207ENST00000529565 EFCAB8A8MWE9 144 aa5.08□□□□□ -1.6
CASP4-207ENST00000529565 MYO1FO00160 1098 aa5.08□□□□□ -1.6
CASP4-207ENST00000529565 SLC16A3O15427 465 aaKnown RBP5.08□□□□□ -1.6
CASP4-207ENST00000529565 THAP12O43422 761 aa5.08□□□□□ -1.6
CASP4-207ENST00000529565 COBLO75128 1261 aa5.08□□□□□ -1.6
CASP4-207ENST00000529565 LONRF2Q1L5Z9 754 aa5.08□□□□□ -1.6
CASP4-207ENST00000529565 CATSPER4Q7RTX7 472 aa5.08□□□□□ -1.6
CASP4-207ENST00000529565 FRMD5Q7Z6J6 570 aa5.08□□□□□ -1.6
CASP4-207ENST00000529565 METTL23Q86XA0 190 aa5.08□□□□□ -1.6
CASP4-207ENST00000529565 SEPT1Q8WYJ6 367 aa5.08□□□□□ -1.6
CASP4-207ENST00000529565 POM121Q96HA1 1249 aa5.08□□□□□ -1.6
CASP4-207ENST00000529565 NLRP4Q96MN2 994 aa5.08□□□□□ -1.6
CASP4-207ENST00000529565 MRPL47Q9HD33 250 aaKnown RBP5.08□□□□□ -1.6
CASP4-207ENST00000529565 UBE2TQ9NPD8 197 aaPredicted RBP5.08□□□□□ -1.6
CASP4-207ENST00000529565 LCMT1Q9UIC8 334 aa5.08□□□□□ -1.6
CASP4-207ENST00000529565 CDC23Q9UJX2 597 aa5.08□□□□□ -1.6
CASP4-207ENST00000529565 DENND3A2RUS2 1198 aa5.07□□□□□ -1.6
CASP4-207ENST00000529565 PABPN1LA6NDY0 278 aaKnown RBP5.07□□□□□ -1.6
CASP4-207ENST00000529565 SFI1A8K8P3 1242 aa5.07□□□□□ -1.6
CASP4-207ENST00000529565 E7EVH7 732 aa5.07□□□□□ -1.6
CASP4-207ENST00000529565 KCNK3O14649 394 aa5.07□□□□□ -1.6
CASP4-207ENST00000529565 NDUFA10O95299 355 aa5.07□□□□□ -1.6
CASP4-207ENST00000529565 HSPA6P17066 643 aa5.07□□□□□ -1.6
CASP4-207ENST00000529565 MARK3P27448 753 aa5.07□□□□□ -1.6
CASP4-207ENST00000529565 YWHABP31946 246 aaKnown RBP5.07□□□□□ -1.6
CASP4-207ENST00000529565 MAN1A1P33908 653 aa5.07□□□□□ -1.6
CASP4-207ENST00000529565 STAT5BP51692 787 aa5.07□□□□□ -1.6
CASP4-207ENST00000529565 GTF2A2P52657 109 aa5.07□□□□□ -1.6
CASP4-207ENST00000529565 PTPAQ15257 358 aa5.07□□□□□ -1.6
CASP4-207ENST00000529565 PTF1AQ7RTS3 328 aa5.07□□□□□ -1.6
CASP4-207ENST00000529565 CCDC105Q8IYK2 499 aa5.07□□□□□ -1.6
CASP4-207ENST00000529565 ABI1Q8IZP0 508 aa5.07□□□□□ -1.6
CASP4-207ENST00000529565 GPRC5AQ8NFJ5 357 aa5.07□□□□□ -1.6
CASP4-207ENST00000529565 HAUS1Q96CS2 278 aa5.07□□□□□ -1.6
CASP4-207ENST00000529565 ATG4CQ96DT6 458 aa5.07□□□□□ -1.6
CASP4-207ENST00000529565 MRPL4Q9BYD3 311 aaKnown RBP5.07□□□□□ -1.6
CASP4-207ENST00000529565 POLR3FQ9H1D9 316 aaPredicted RBP5.07□□□□□ -1.6
CASP4-207ENST00000529565 SNX25Q9H3E2 840 aa5.07□□□□□ -1.6
CASP4-207ENST00000529565 NHEJ1Q9H9Q4 299 aaPredicted RBP5.07□□□□□ -1.6
CASP4-207ENST00000529565 ANKEF1Q9NU02 776 aa5.07□□□□□ -1.6
CASP4-207ENST00000529565 ASIC3Q9UHC3 531 aa5.07□□□□□ -1.6
CASP4-207ENST00000529565 PYCARDQ9ULZ3 195 aa5.07□□□□□ -1.6
CASP4-207ENST00000529565 AHDC1Q5TGY3 1603 aaPredicted RBP5.07□□□□□ -1.6
CASP4-207ENST00000529565 SLC16A4O15374 487 aa5.07□□□□□ -1.6
CASP4-207ENST00000529565 HIP1RO75146 1068 aa5.07□□□□□ -1.6
CASP4-207ENST00000529565 MYL3P08590 195 aa5.07□□□□□ -1.6
CASP4-207ENST00000529565 TXNP10599 105 aaKnown RBP5.07□□□□□ -1.6
CASP4-207ENST00000529565 SREBF1P36956 1147 aa5.07□□□□□ -1.6
CASP4-207ENST00000529565 EIF4A3P38919 411 aaKnown RBP5.07□□□□□ -1.6
CASP4-207ENST00000529565 RFC5P40937 340 aa5.07□□□□□ -1.6
CASP4-207ENST00000529565 RASSF7Q02833 373 aa5.07□□□□□ -1.6
CASP4-207ENST00000529565 TAF1CQ15572 869 aaPredicted RBP5.07□□□□□ -1.6
CASP4-207ENST00000529565 EDRF1Q3B7T1 1238 aa5.07□□□□□ -1.6
CASP4-207ENST00000529565 SND1Q7KZF4 910 aaKnown RBP eCLIP5.07□□□□□ -1.6
CASP4-207ENST00000529565 ENOSF1Q7L5Y1 443 aa5.07□□□□□ -1.6
CASP4-207ENST00000529565 HAUS6Q7Z4H7 955 aa5.07□□□□□ -1.6
CASP4-207ENST00000529565 CCDC25Q86WR0 208 aa5.07□□□□□ -1.6
CASP4-207ENST00000529565 MAP7D3Q8IWC1 876 aa5.07□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 9.2 ms