RNA–Protein interactions for RNA: ENST00000529467.1

CHRNA6-202, Transcript of cholinergic receptor nicotinic alpha 6 subunit, humanhuman

TSL 3

Gene CHRNA6, Length 529 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA6-202ENST00000529467 LZTS2Q9BRK4 669 aa7.09□□□□□ -1.27
CHRNA6-202ENST00000529467 MTA3Q9BTC8 594 aa7.09□□□□□ -1.27
CHRNA6-202ENST00000529467 MYL10Q9BUA6 226 aa7.09□□□□□ -1.27
CHRNA6-202ENST00000529467 FTHL17Q9BXU8 183 aa7.09□□□□□ -1.27
CHRNA6-202ENST00000529467 CELF4Q9BZC1 486 aaKnown RBP7.09□□□□□ -1.27
CHRNA6-202ENST00000529467 TMX1Q9H3N1 280 aa7.09□□□□□ -1.27
CHRNA6-202ENST00000529467 PSTPIP2Q9H939 334 aa7.09□□□□□ -1.27
CHRNA6-202ENST00000529467 LY9Q9HBG7 655 aa7.09□□□□□ -1.27
CHRNA6-202ENST00000529467 PCDHA6Q9UN73 950 aa7.09□□□□□ -1.27
CHRNA6-202ENST00000529467 PCDHA8Q9Y5H6 950 aa7.09□□□□□ -1.27
CHRNA6-202ENST00000529467 PCDHA2Q9Y5H9 948 aa7.09□□□□□ -1.27
CHRNA6-202ENST00000529467 TRPV2Q9Y5S1 764 aa7.09□□□□□ -1.27
CHRNA6-202ENST00000529467 C5orf42Q9H799 3197 aa7.09□□□□□ -1.27
CHRNA6-202ENST00000529467 IGSF9BQ9UPX0 1349 aa7.08□□□□□ -1.28
CHRNA6-202ENST00000529467 KDM3AQ9Y4C1 1321 aa7.08□□□□□ -1.28
CHRNA6-202ENST00000529467 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP7.08□□□□□ -1.28
CHRNA6-202ENST00000529467 SMIM35A0A1B0GVV1 85 aa7.08□□□□□ -1.28
CHRNA6-202ENST00000529467 TMEM221A6NGB7 291 aa7.08□□□□□ -1.28
CHRNA6-202ENST00000529467 M0R296 226 aa7.08□□□□□ -1.28
CHRNA6-202ENST00000529467 ATG7O95352 703 aa7.08□□□□□ -1.28
CHRNA6-202ENST00000529467 GLP2RO95838 553 aa7.08□□□□□ -1.28
CHRNA6-202ENST00000529467 STAG3L1P0CL83 205 aa7.08□□□□□ -1.28
CHRNA6-202ENST00000529467 NRIP1P48552 1158 aa7.08□□□□□ -1.28
CHRNA6-202ENST00000529467 NDUFV1P49821 464 aa7.08□□□□□ -1.28
CHRNA6-202ENST00000529467 GNAQP50148 359 aa7.08□□□□□ -1.28
CHRNA6-202ENST00000529467 GATMP50440 423 aa7.08□□□□□ -1.28
CHRNA6-202ENST00000529467 ZXDAP98168 799 aa7.08□□□□□ -1.28
CHRNA6-202ENST00000529467 TMEM62Q0P6H9 643 aa7.08□□□□□ -1.28
CHRNA6-202ENST00000529467 MTMR1Q13613 665 aa7.08□□□□□ -1.28
CHRNA6-202ENST00000529467 COL9A3Q14050 684 aaPredicted RBP7.08□□□□□ -1.28
CHRNA6-202ENST00000529467 PLCB4Q15147 1175 aa7.08□□□□□ -1.28
CHRNA6-202ENST00000529467 UBE2SQ16763 222 aa7.08□□□□□ -1.28
CHRNA6-202ENST00000529467 PAN2Q504Q3 1202 aaKnown RBP7.08□□□□□ -1.28
CHRNA6-202ENST00000529467 PLPPR4Q7Z2D5 763 aa7.08□□□□□ -1.28
CHRNA6-202ENST00000529467 RBM23Q86U06 439 aaKnown RBP7.08□□□□□ -1.28
CHRNA6-202ENST00000529467 TMTC2Q8N394 836 aa7.08□□□□□ -1.28
CHRNA6-202ENST00000529467 NME8Q8N427 588 aa7.08□□□□□ -1.28
CHRNA6-202ENST00000529467 PRSS33Q8NF86 280 aa7.08□□□□□ -1.28
CHRNA6-202ENST00000529467 CYP2W1Q8TAV3 490 aa7.08□□□□□ -1.28
CHRNA6-202ENST00000529467 ATP8B4Q8TF62 1192 aa7.08□□□□□ -1.28
CHRNA6-202ENST00000529467 TRAPPC12Q8WVT3 735 aa7.08□□□□□ -1.28
CHRNA6-202ENST00000529467 PPP2R3CQ969Q6 453 aa7.08□□□□□ -1.28
CHRNA6-202ENST00000529467 PBXIP1Q96AQ6 731 aa7.08□□□□□ -1.28
CHRNA6-202ENST00000529467 MXRA8Q9BRK3 442 aa7.08□□□□□ -1.28
CHRNA6-202ENST00000529467 FAM49AQ9H0Q0 323 aaPredicted RBP7.08□□□□□ -1.28
CHRNA6-202ENST00000529467 CDHR5Q9HBB8 845 aa7.08□□□□□ -1.28
CHRNA6-202ENST00000529467 ZSWIM6Q9HCJ5 1215 aa7.08□□□□□ -1.28
CHRNA6-202ENST00000529467 KCNH7Q9NS40 1196 aa7.08□□□□□ -1.28
CHRNA6-202ENST00000529467 PKD2L1Q9P0L9 805 aa7.08□□□□□ -1.28
CHRNA6-202ENST00000529467 SLC9A2Q9UBY0 812 aa7.08□□□□□ -1.28
CHRNA6-202ENST00000529467 SEC63Q9UGP8 760 aaKnown RBP7.08□□□□□ -1.28
CHRNA6-202ENST00000529467 PCDHGC5Q9Y5F6 944 aa7.08□□□□□ -1.28
CHRNA6-202ENST00000529467 IGKV6D-21A0A0A0MT36 114 aa7.07□□□□□ -1.28
CHRNA6-202ENST00000529467 hCG_1642624A0A1W2PR95 340 aa7.07□□□□□ -1.28
CHRNA6-202ENST00000529467 FAM205CA6NFA0 338 aa7.07□□□□□ -1.28
CHRNA6-202ENST00000529467 SPDYE3A6NKU9 549 aa7.07□□□□□ -1.28
CHRNA6-202ENST00000529467 M0QZ92 97 aa7.07□□□□□ -1.28
CHRNA6-202ENST00000529467 SH2B2O14492 632 aaPredicted RBP7.07□□□□□ -1.28
CHRNA6-202ENST00000529467 PRC1O43663 620 aa7.07□□□□□ -1.28
CHRNA6-202ENST00000529467 MGEA5O60502 916 aa7.07□□□□□ -1.28
CHRNA6-202ENST00000529467 PPFIA3O75145 1194 aa7.07□□□□□ -1.28
CHRNA6-202ENST00000529467 ARP10275 920 aa7.07□□□□□ -1.28
CHRNA6-202ENST00000529467 SCG2P13521 617 aa7.07□□□□□ -1.28
CHRNA6-202ENST00000529467 PDIA4P13667 645 aaKnown RBP7.07□□□□□ -1.28
CHRNA6-202ENST00000529467 RXRAP19793 462 aa7.07□□□□□ -1.28
CHRNA6-202ENST00000529467 LIFRP42702 1097 aa7.07□□□□□ -1.28
CHRNA6-202ENST00000529467 SARSP49591 514 aaKnown RBP7.07□□□□□ -1.28
CHRNA6-202ENST00000529467 STAT5BP51692 787 aa7.07□□□□□ -1.28
CHRNA6-202ENST00000529467 ERVFC1P60507 584 aa7.07□□□□□ -1.28
CHRNA6-202ENST00000529467 ACTR2P61160 394 aa7.07□□□□□ -1.28
CHRNA6-202ENST00000529467 PAK2Q13177 524 aa7.07□□□□□ -1.28
CHRNA6-202ENST00000529467 TSGA10IPQ3SY00 556 aa7.07□□□□□ -1.28
CHRNA6-202ENST00000529467 MTHFD1LQ6UB35 978 aa7.07□□□□□ -1.28
CHRNA6-202ENST00000529467 TMEM92Q6UXU6 159 aa7.07□□□□□ -1.28
CHRNA6-202ENST00000529467 FAM43BQ6ZT52 329 aaPredicted RBP7.07□□□□□ -1.28
CHRNA6-202ENST00000529467 SUSD6Q92537 303 aa7.07□□□□□ -1.28
CHRNA6-202ENST00000529467 KCNB2Q92953 911 aa7.07□□□□□ -1.28
CHRNA6-202ENST00000529467 TNPO1Q92973 898 aaKnown RBP7.07□□□□□ -1.28
CHRNA6-202ENST00000529467 TMEM87BQ96K49 555 aa7.07□□□□□ -1.28
CHRNA6-202ENST00000529467 PHF7Q9BWX1 381 aaPredicted RBP7.07□□□□□ -1.28
CHRNA6-202ENST00000529467 AZI2Q9H6S1 392 aa7.07□□□□□ -1.28
CHRNA6-202ENST00000529467 TLE6Q9H808 572 aa7.07□□□□□ -1.28
CHRNA6-202ENST00000529467 ERVK-5Q9HDB9 667 aa7.07□□□□□ -1.28
CHRNA6-202ENST00000529467 JPH1Q9HDC5 661 aaPredicted RBP7.07□□□□□ -1.28
CHRNA6-202ENST00000529467 BARX2Q9UMQ3 279 aaPredicted RBP7.07□□□□□ -1.28
CHRNA6-202ENST00000529467 NOC2LQ9Y3T9 749 aaKnown RBP7.07□□□□□ -1.28
CHRNA6-202ENST00000529467 USP15Q9Y4E8 981 aaPredicted RBP7.07□□□□□ -1.28
CHRNA6-202ENST00000529467 PCDHB7Q9Y5E2 793 aa7.07□□□□□ -1.28
CHRNA6-202ENST00000529467 RBM8AQ9Y5S9 174 aaKnown RBP7.07□□□□□ -1.28
CHRNA6-202ENST00000529467 MYH9P35579 1960 aaKnown RBP7.07□□□□□ -1.28
CHRNA6-202ENST00000529467 NFASCO94856 1347 aa7.06□□□□□ -1.28
CHRNA6-202ENST00000529467 WDR81Q562E7 1941 aa7.06□□□□□ -1.28
CHRNA6-202ENST00000529467 CCDC69A6NI79 296 aa7.06□□□□□ -1.28
CHRNA6-202ENST00000529467 C9IYK1 514 aa7.06□□□□□ -1.28
CHRNA6-202ENST00000529467 MEIS1O00470 390 aa7.06□□□□□ -1.28
CHRNA6-202ENST00000529467 FSCN2O14926 492 aa7.06□□□□□ -1.28
CHRNA6-202ENST00000529467 PER2O15055 1255 aa7.06□□□□□ -1.28
CHRNA6-202ENST00000529467 CALM1P0DP23 149 aa7.06□□□□□ -1.28
CHRNA6-202ENST00000529467 CALM2P0DP24 149 aa7.06□□□□□ -1.28
CHRNA6-202ENST00000529467 CALM3P0DP25 149 aa7.06□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms