RNA–Protein interactions for RNA: ENST00000528930.5

SSBP3-212, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 1 (best)

Gene SSBP3, Length 862 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-212ENST00000528930 AFAP1L1Q8TED9 768 aa9.81□□□□□ -0.84
SSBP3-212ENST00000528930 MTMR8Q96EF0 704 aa9.81□□□□□ -0.84
SSBP3-212ENST00000528930 MTA3Q9BTC8 594 aa9.81□□□□□ -0.84
SSBP3-212ENST00000528930 LY9Q9HBG7 655 aa9.81□□□□□ -0.84
SSBP3-212ENST00000528930 VAT1LQ9HCJ6 419 aa9.81□□□□□ -0.84
SSBP3-212ENST00000528930 PPP4R2Q9NY27 417 aa9.81□□□□□ -0.84
SSBP3-212ENST00000528930 STK17AQ9UEE5 414 aa9.81□□□□□ -0.84
SSBP3-212ENST00000528930 PNMA2Q9UL42 364 aa9.81□□□□□ -0.84
SSBP3-212ENST00000528930 DDX49Q9Y6V7 483 aaKnown RBP9.81□□□□□ -0.84
SSBP3-212ENST00000528930 DENND4AQ7Z401 1863 aa9.81□□□□□ -0.84
SSBP3-212ENST00000528930 ERICH2A1L162 156 aa9.8□□□□□ -0.84
SSBP3-212ENST00000528930 GRM6O15303 877 aa9.8□□□□□ -0.84
SSBP3-212ENST00000528930 WIPF1O43516 503 aa9.8□□□□□ -0.84
SSBP3-212ENST00000528930 PRC1O43663 620 aa9.8□□□□□ -0.84
SSBP3-212ENST00000528930 NBNO60934 754 aa9.8□□□□□ -0.84
SSBP3-212ENST00000528930 PARNO95453 639 aaKnown RBP9.8□□□□□ -0.84
SSBP3-212ENST00000528930 GLP2RO95838 553 aa9.8□□□□□ -0.84
SSBP3-212ENST00000528930 PTGS1P23219 599 aa9.8□□□□□ -0.84
SSBP3-212ENST00000528930 MCM5P33992 734 aa9.8□□□□□ -0.84
SSBP3-212ENST00000528930 SART3Q15020 963 aaKnown RBP9.8□□□□□ -0.84
SSBP3-212ENST00000528930 QRICH1Q2TAL8 776 aa9.8□□□□□ -0.84
SSBP3-212ENST00000528930 TSGA10IPQ3SY00 556 aa9.8□□□□□ -0.84
SSBP3-212ENST00000528930 USH1GQ495M9 461 aa9.8□□□□□ -0.84
SSBP3-212ENST00000528930 MSS51Q4VC12 460 aa9.8□□□□□ -0.84
SSBP3-212ENST00000528930 ZC3H14Q6PJT7 736 aaKnown RBP9.8□□□□□ -0.84
SSBP3-212ENST00000528930 ZBTB33Q86T24 672 aa9.8□□□□□ -0.84
SSBP3-212ENST00000528930 EFHBQ8N7U6 833 aa9.8□□□□□ -0.84
SSBP3-212ENST00000528930 MORC4Q8TE76 937 aa9.8□□□□□ -0.84
SSBP3-212ENST00000528930 TBC1D5Q92609 795 aa9.8□□□□□ -0.84
SSBP3-212ENST00000528930 HPS1Q92902 700 aa9.8□□□□□ -0.84
SSBP3-212ENST00000528930 RIOX1Q9H6W3 641 aa9.8□□□□□ -0.84
SSBP3-212ENST00000528930 ZMIZ1Q9ULJ6 1067 aa9.8□□□□□ -0.84
SSBP3-212ENST00000528930 Q9Y3F1 56 aa9.8□□□□□ -0.84
SSBP3-212ENST00000528930 PTPDC1A2A3K4 754 aa9.79□□□□□ -0.84
SSBP3-212ENST00000528930 ASB14A6NK59 587 aa9.79□□□□□ -0.84
SSBP3-212ENST00000528930 TAF4O00268 1085 aa9.79□□□□□ -0.84
SSBP3-212ENST00000528930 SH2B2O14492 632 aaPredicted RBP9.79□□□□□ -0.84
SSBP3-212ENST00000528930 TERTO14746 1132 aaKnown RBP9.79□□□□□ -0.84
SSBP3-212ENST00000528930 PI15O43692 258 aa9.79□□□□□ -0.84
SSBP3-212ENST00000528930 CYTH3O43739 400 aa9.79□□□□□ -0.84
SSBP3-212ENST00000528930 PPP1R11O60927 126 aaPredicted RBP9.79□□□□□ -0.84
SSBP3-212ENST00000528930 MMP1P03956 469 aa9.79□□□□□ -0.84
SSBP3-212ENST00000528930 LINC00271P0C7V0 271 aa9.79□□□□□ -0.84
SSBP3-212ENST00000528930 LIFRP42702 1097 aa9.79□□□□□ -0.84
SSBP3-212ENST00000528930 RPS6P62753 249 aaKnown RBP9.79□□□□□ -0.84
SSBP3-212ENST00000528930 RBL2Q08999 1139 aa9.79□□□□□ -0.84
SSBP3-212ENST00000528930 TAPT1Q6NXT6 567 aa9.79□□□□□ -0.84
SSBP3-212ENST00000528930 CASC1Q6TDU7 716 aa9.79□□□□□ -0.84
SSBP3-212ENST00000528930 SLC30A10Q6XR72 485 aa9.79□□□□□ -0.84
SSBP3-212ENST00000528930 RNF207Q6ZRF8 634 aa9.79□□□□□ -0.84
SSBP3-212ENST00000528930 RGS22Q8NE09 1264 aa9.79□□□□□ -0.84
SSBP3-212ENST00000528930 CAGE1Q8TC20 777 aa9.79□□□□□ -0.84
SSBP3-212ENST00000528930 KCNB2Q92953 911 aa9.79□□□□□ -0.84
SSBP3-212ENST00000528930 TMEM87BQ96K49 555 aa9.79□□□□□ -0.84
SSBP3-212ENST00000528930 MAF1Q9H063 256 aa9.79□□□□□ -0.84
SSBP3-212ENST00000528930 AP5M1Q9H0R1 490 aa9.79□□□□□ -0.84
SSBP3-212ENST00000528930 MFSD1Q9H3U5 465 aa9.79□□□□□ -0.84
SSBP3-212ENST00000528930 SMOC2Q9H3U7 446 aa9.79□□□□□ -0.84
SSBP3-212ENST00000528930 IGFLR1Q9H665 355 aa9.79□□□□□ -0.84
SSBP3-212ENST00000528930 MYH7BA7E2Y1 1941 aa9.79□□□□□ -0.84
SSBP3-212ENST00000528930 MYH6P13533 1939 aa9.78□□□□□ -0.84
SSBP3-212ENST00000528930 LOC102724159A0A0B4J2E5 919 aa9.78□□□□□ -0.84
SSBP3-212ENST00000528930 OPLAHO14841 1288 aa9.78□□□□□ -0.84
SSBP3-212ENST00000528930 ZBTB5O15062 677 aa9.78□□□□□ -0.84
SSBP3-212ENST00000528930 DHX16O60231 1041 aaKnown RBP9.78□□□□□ -0.84
SSBP3-212ENST00000528930 RB1P06400 928 aa9.78□□□□□ -0.84
SSBP3-212ENST00000528930 NPR3P17342 541 aa9.78□□□□□ -0.84
SSBP3-212ENST00000528930 CALML3P27482 149 aa9.78□□□□□ -0.84
SSBP3-212ENST00000528930 ALDH5A1P51649 535 aaPredicted RBP9.78□□□□□ -0.84
SSBP3-212ENST00000528930 PURAQ00577 322 aaKnown RBP9.78□□□□□ -0.84
SSBP3-212ENST00000528930 EXOSC10Q01780 885 aaKnown RBP9.78□□□□□ -0.84
SSBP3-212ENST00000528930 IKBKEQ14164 716 aa9.78□□□□□ -0.84
SSBP3-212ENST00000528930 PWP2Q15269 919 aaKnown RBP9.78□□□□□ -0.84
SSBP3-212ENST00000528930 ADCK5Q3MIX3 580 aa9.78□□□□□ -0.84
SSBP3-212ENST00000528930 TMEM63BQ5T3F8 832 aa9.78□□□□□ -0.84
SSBP3-212ENST00000528930 RNF20Q5VTR2 975 aa9.78□□□□□ -0.84
SSBP3-212ENST00000528930 NFRKBQ6P4R8 1299 aa9.78□□□□□ -0.84
SSBP3-212ENST00000528930 LIN28BQ6ZN17 250 aaKnown RBP eCLIP9.78□□□□□ -0.84
SSBP3-212ENST00000528930 LRRC8DQ7L1W4 858 aa9.78□□□□□ -0.84
SSBP3-212ENST00000528930 CATIPQ7Z7H3 387 aa9.78□□□□□ -0.84
SSBP3-212ENST00000528930 ZNF654Q8IZM8 581 aa9.78□□□□□ -0.84
SSBP3-212ENST00000528930 NEK1Q96PY6 1258 aa9.78□□□□□ -0.84
SSBP3-212ENST00000528930 CTAGE1Q96RT6 745 aa9.78□□□□□ -0.84
SSBP3-212ENST00000528930 PIGSQ96S52 555 aa9.78□□□□□ -0.84
SSBP3-212ENST00000528930 MAP3K14Q99558 947 aa9.78□□□□□ -0.84
SSBP3-212ENST00000528930 C11orf84Q9BUA3 381 aaPredicted RBP9.78□□□□□ -0.84
SSBP3-212ENST00000528930 MYL10Q9BUA6 226 aa9.78□□□□□ -0.84
SSBP3-212ENST00000528930 LRRC2Q9BYS8 371 aa9.78□□□□□ -0.84
SSBP3-212ENST00000528930 PDGFCQ9NRA1 345 aa9.78□□□□□ -0.84
SSBP3-212ENST00000528930 COL20A1Q9P218 1284 aa9.78□□□□□ -0.84
SSBP3-212ENST00000528930 ADD3Q9UEY8 706 aaKnown RBP9.78□□□□□ -0.84
SSBP3-212ENST00000528930 RBM19Q9Y4C8 960 aaKnown RBP9.78□□□□□ -0.84
SSBP3-212ENST00000528930 RALGAPA1Q6GYQ0 2036 aa9.78□□□□□ -0.84
SSBP3-212ENST00000528930 ABCB11O95342 1321 aa9.78□□□□□ -0.84
SSBP3-212ENST00000528930 ADAMTS20P59510 1910 aa9.78□□□□□ -0.84
SSBP3-212ENST00000528930 MIA3Q5JRA6 1907 aa9.78□□□□□ -0.84
SSBP3-212ENST00000528930 BAZ2BQ9UIF8 2168 aaKnown RBP9.77□□□□□ -0.85
SSBP3-212ENST00000528930 RBM47A0AV96 593 aaKnown RBP9.77□□□□□ -0.85
SSBP3-212ENST00000528930 DYNC1LI2O43237 492 aaPredicted RBP9.77□□□□□ -0.85
SSBP3-212ENST00000528930 DDAH1O94760 285 aa9.77□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms