RNA–Protein interactions for RNA: ENST00000528865.5

CSTF3-208, Transcript of cleavage stimulation factor subunit 3, humanhuman

TSL 5

Gene CSTF3, Length 592 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF3-208ENST00000528865 MKNK1Q9BUB5 465 aa9.16□□□□□ -0.94
CSTF3-208ENST00000528865 TUFT1Q9NNX1 390 aa9.16□□□□□ -0.94
CSTF3-208ENST00000528865 DMAC2Q9NW81 257 aa9.16□□□□□ -0.94
CSTF3-208ENST00000528865 FAM198AQ9UFP1 575 aa9.16□□□□□ -0.94
CSTF3-208ENST00000528865 FAM153AQ9UHL3 310 aa9.16□□□□□ -0.94
CSTF3-208ENST00000528865 NFU1Q9UMS0 254 aa9.16□□□□□ -0.94
CSTF3-208ENST00000528865 ATXN2Q99700 1313 aaKnown RBP9.15□□□□□ -0.94
CSTF3-208ENST00000528865 IGLV3-22A0A075B6J6 115 aa9.15□□□□□ -0.94
CSTF3-208ENST00000528865 DDTLA6NHG4 134 aaPredicted RBP9.15□□□□□ -0.94
CSTF3-208ENST00000528865 SPDYE3A6NKU9 549 aa9.15□□□□□ -0.94
CSTF3-208ENST00000528865 EML1O00423 815 aa9.15□□□□□ -0.94
CSTF3-208ENST00000528865 DDX3XO00571 662 aaKnown RBP eCLIP9.15□□□□□ -0.94
CSTF3-208ENST00000528865 OPLAHO14841 1288 aa9.15□□□□□ -0.94
CSTF3-208ENST00000528865 TGFB1I1O43294 461 aa9.15□□□□□ -0.94
CSTF3-208ENST00000528865 FLOT1O75955 427 aa9.15□□□□□ -0.94
CSTF3-208ENST00000528865 NDUFB10O96000 172 aa9.15□□□□□ -0.94
CSTF3-208ENST00000528865 ERCC3P19447 782 aa9.15□□□□□ -0.94
CSTF3-208ENST00000528865 ECHS1P30084 290 aa9.15□□□□□ -0.94
CSTF3-208ENST00000528865 STAT1P42224 750 aa9.15□□□□□ -0.94
CSTF3-208ENST00000528865 MCCD1P59942 119 aaPredicted RBP9.15□□□□□ -0.94
CSTF3-208ENST00000528865 GNGT1P63211 74 aa9.15□□□□□ -0.94
CSTF3-208ENST00000528865 TRAF1Q13077 416 aa9.15□□□□□ -0.94
CSTF3-208ENST00000528865 PABPC4Q13310 644 aaKnown RBP eCLIP9.15□□□□□ -0.94
CSTF3-208ENST00000528865 MYBPC2Q14324 1141 aa9.15□□□□□ -0.94
CSTF3-208ENST00000528865 TCEAL1Q15170 157 aa9.15□□□□□ -0.94
CSTF3-208ENST00000528865 STRIP1Q5VSL9 837 aa9.15□□□□□ -0.94
CSTF3-208ENST00000528865 RINT1Q6NUQ1 792 aa9.15□□□□□ -0.94
CSTF3-208ENST00000528865 OTOP1Q7RTM1 612 aa9.15□□□□□ -0.94
CSTF3-208ENST00000528865 SPATS2Q86XZ4 545 aaKnown RBP9.15□□□□□ -0.94
CSTF3-208ENST00000528865 GPIHBP1Q8IV16 184 aa9.15□□□□□ -0.94
CSTF3-208ENST00000528865 EFCAB13Q8IY85 973 aa9.15□□□□□ -0.94
CSTF3-208ENST00000528865 C10orf67Q8IYJ2 551 aa9.15□□□□□ -0.94
CSTF3-208ENST00000528865 SYCE1Q8N0S2 351 aa9.15□□□□□ -0.94
CSTF3-208ENST00000528865 METTL13Q8N6R0 699 aa9.15□□□□□ -0.94
CSTF3-208ENST00000528865 TMEM174Q8WUU8 243 aa9.15□□□□□ -0.94
CSTF3-208ENST00000528865 SLC5A5Q92911 643 aa9.15□□□□□ -0.94
CSTF3-208ENST00000528865 SPAG5Q96R06 1193 aa9.15□□□□□ -0.94
CSTF3-208ENST00000528865 RUFY1Q96T51 708 aa9.15□□□□□ -0.94
CSTF3-208ENST00000528865 EIF2AK1Q9BQI3 630 aaKnown RBP9.15□□□□□ -0.94
CSTF3-208ENST00000528865 BUD13Q9BRD0 619 aaKnown RBP eCLIP9.15□□□□□ -0.94
CSTF3-208ENST00000528865 SYT11Q9BT88 431 aa9.15□□□□□ -0.94
CSTF3-208ENST00000528865 STK33Q9BYT3 514 aa9.15□□□□□ -0.94
CSTF3-208ENST00000528865 TAF1DQ9H5J8 278 aaPredicted RBP9.15□□□□□ -0.94
CSTF3-208ENST00000528865 SLITRK6Q9H5Y7 841 aa9.15□□□□□ -0.94
CSTF3-208ENST00000528865 TMBIM4Q9HC24 238 aa9.15□□□□□ -0.94
CSTF3-208ENST00000528865 KCNQ5Q9NR82 932 aa9.15□□□□□ -0.94
CSTF3-208ENST00000528865 DIS3Q9Y2L1 958 aaKnown RBP9.15□□□□□ -0.94
CSTF3-208ENST00000528865 MYH4Q9Y623 1939 aa9.15□□□□□ -0.95
CSTF3-208ENST00000528865 SIPA1L1O43166 1804 aa9.15□□□□□ -0.95
CSTF3-208ENST00000528865 NCANO14594 1321 aa9.14□□□□□ -0.95
CSTF3-208ENST00000528865 RSPH10B2B2RC85 870 aa9.14□□□□□ -0.95
CSTF3-208ENST00000528865 HMGB1P1B2RPK0 211 aaPredicted RBP9.14□□□□□ -0.95
CSTF3-208ENST00000528865 H0YGN5 161 aa9.14□□□□□ -0.95
CSTF3-208ENST00000528865 MEIS1O00470 390 aa9.14□□□□□ -0.95
CSTF3-208ENST00000528865 EBAG9O00559 213 aa9.14□□□□□ -0.95
CSTF3-208ENST00000528865 KCNK3O14649 394 aa9.14□□□□□ -0.95
CSTF3-208ENST00000528865 ENTPD3O75355 529 aa9.14□□□□□ -0.95
CSTF3-208ENST00000528865 SLITRK3O94933 977 aa9.14□□□□□ -0.95
CSTF3-208ENST00000528865 RSPH10BP0C881 870 aa9.14□□□□□ -0.95
CSTF3-208ENST00000528865 SLURP2P0DP57 97 aa9.14□□□□□ -0.95
CSTF3-208ENST00000528865 BMP3P12645 472 aa9.14□□□□□ -0.95
CSTF3-208ENST00000528865 SOX5P35711 763 aa9.14□□□□□ -0.95
CSTF3-208ENST00000528865 PSMC2P35998 433 aaKnown RBP9.14□□□□□ -0.95
CSTF3-208ENST00000528865 CASP4P49662 377 aa9.14□□□□□ -0.95
CSTF3-208ENST00000528865 ZNF131P52739 623 aa9.14□□□□□ -0.95
CSTF3-208ENST00000528865 ERVK-9P63128 1117 aa9.14□□□□□ -0.95
CSTF3-208ENST00000528865 POU5F1Q01860 360 aaKnown RBP9.14□□□□□ -0.95
CSTF3-208ENST00000528865 ARID5AQ03989 594 aa9.14□□□□□ -0.95
CSTF3-208ENST00000528865 ICA1Q05084 483 aa9.14□□□□□ -0.95
CSTF3-208ENST00000528865 PPATQ06203 517 aa9.14□□□□□ -0.95
CSTF3-208ENST00000528865 PPP2R5CQ13362 524 aa9.14□□□□□ -0.95
CSTF3-208ENST00000528865 SPDYCQ5MJ68 293 aa9.14□□□□□ -0.95
CSTF3-208ENST00000528865 DACT2Q5SW24 774 aa9.14□□□□□ -0.95
CSTF3-208ENST00000528865 B3GNT9Q6UX72 402 aa9.14□□□□□ -0.95
CSTF3-208ENST00000528865 NT5DC3Q86UY8 548 aa9.14□□□□□ -0.95
CSTF3-208ENST00000528865 VPS36Q86VN1 386 aa9.14□□□□□ -0.95
CSTF3-208ENST00000528865 SLC9A9Q8IVB4 645 aa9.14□□□□□ -0.95
CSTF3-208ENST00000528865 FMNL3Q8IVF7 1028 aa9.14□□□□□ -0.95
CSTF3-208ENST00000528865 SEPT12Q8IYM1 358 aa9.14□□□□□ -0.95
CSTF3-208ENST00000528865 NLGN1Q8N2Q7 840 aa9.14□□□□□ -0.95
CSTF3-208ENST00000528865 LNX1Q8TBB1 728 aaPredicted RBP9.14□□□□□ -0.95
CSTF3-208ENST00000528865 IFT81Q8WYA0 676 aa9.14□□□□□ -0.95
CSTF3-208ENST00000528865 VTI1AQ96AJ9 217 aa9.14□□□□□ -0.95
CSTF3-208ENST00000528865 LRRC45Q96CN5 670 aa9.14□□□□□ -0.95
CSTF3-208ENST00000528865 HES6Q96HZ4 224 aa9.14□□□□□ -0.95
CSTF3-208ENST00000528865 ATP6V1G3Q96LB4 118 aa9.14□□□□□ -0.95
CSTF3-208ENST00000528865 FIZ1Q96SL8 496 aa9.14□□□□□ -0.95
CSTF3-208ENST00000528865 RUSC1Q9BVN2 902 aa9.14□□□□□ -0.95
CSTF3-208ENST00000528865 STRA6Q9BX79 667 aa9.14□□□□□ -0.95
CSTF3-208ENST00000528865 ZHX3Q9H4I2 956 aa9.14□□□□□ -0.95
CSTF3-208ENST00000528865 EFCC1Q9HA90 598 aa9.14□□□□□ -0.95
CSTF3-208ENST00000528865 KCND2Q9NZV8 630 aa9.14□□□□□ -0.95
CSTF3-208ENST00000528865 SEL1LQ9UBV2 794 aa9.14□□□□□ -0.95
CSTF3-208ENST00000528865 GGA2Q9UJY4 613 aa9.14□□□□□ -0.95
CSTF3-208ENST00000528865 AJAP1Q9UKB5 411 aaPredicted RBP9.14□□□□□ -0.95
CSTF3-208ENST00000528865 PACSIN2Q9UNF0 486 aaPredicted RBP9.14□□□□□ -0.95
CSTF3-208ENST00000528865 RABGAP1Q9Y3P9 1069 aa9.14□□□□□ -0.95
CSTF3-208ENST00000528865 NFS1Q9Y697 457 aa9.14□□□□□ -0.95
CSTF3-208ENST00000528865 COL2A1P02458 1487 aaPredicted RBP9.14□□□□□ -0.95
CSTF3-208ENST00000528865 ATRNL1Q5VV63 1379 aa9.13□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 609.9 ms