RNA–Protein interactions for RNA: ENST00000528336.1

PCF11-202, Transcript of PCF11, cleavage and polyadenylation factor subunit, humanhuman

TSL 5

Gene PCF11, Length 1,041 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCF11-202ENST00000528336 AFAP1L2Q8N4X5 818 aa8.07□□□□□ -1.12
PCF11-202ENST00000528336 NUDT10Q8NFP7 164 aa8.07□□□□□ -1.12
PCF11-202ENST00000528336 CALML6Q8TD86 181 aa8.07□□□□□ -1.12
PCF11-202ENST00000528336 E2F7Q96AV8 911 aa8.07□□□□□ -1.12
PCF11-202ENST00000528336 NUDT11Q96G61 164 aa8.07□□□□□ -1.12
PCF11-202ENST00000528336 TUBGCP5Q96RT8 1024 aa8.07□□□□□ -1.12
PCF11-202ENST00000528336 BTBD2Q9BX70 525 aa8.07□□□□□ -1.12
PCF11-202ENST00000528336 TMEM168Q9H0V1 697 aa8.07□□□□□ -1.12
PCF11-202ENST00000528336 MS4A5Q9H3V2 200 aa8.07□□□□□ -1.12
PCF11-202ENST00000528336 ZMAT4Q9H898 229 aa8.07□□□□□ -1.12
PCF11-202ENST00000528336 UBA6A0AVT1 1052 aaPredicted RBP8.06□□□□□ -1.12
PCF11-202ENST00000528336 ANKRD62A6NC57 917 aa8.06□□□□□ -1.12
PCF11-202ENST00000528336 TRIM13O60858 407 aa8.06□□□□□ -1.12
PCF11-202ENST00000528336 APOL3O95236 402 aa8.06□□□□□ -1.12
PCF11-202ENST00000528336 CANXP27824 592 aaKnown RBP8.06□□□□□ -1.12
PCF11-202ENST00000528336 JAG1P78504 1218 aa8.06□□□□□ -1.12
PCF11-202ENST00000528336 SMAD3P84022 425 aaKnown RBP8.06□□□□□ -1.12
PCF11-202ENST00000528336 DDB1Q16531 1140 aa8.06□□□□□ -1.12
PCF11-202ENST00000528336 ZNF761Q86XN6 746 aaPredicted RBP8.06□□□□□ -1.12
PCF11-202ENST00000528336 NME9Q86XW9 330 aa8.06□□□□□ -1.12
PCF11-202ENST00000528336 ATL2Q8NHH9 583 aa8.06□□□□□ -1.12
PCF11-202ENST00000528336 KRTAP9-2Q9BYQ4 174 aa8.06□□□□□ -1.12
PCF11-202ENST00000528336 OR10A5Q9H207 317 aa8.06□□□□□ -1.12
PCF11-202ENST00000528336 LCHNA4D1U4 455 aa8.05□□□□□ -1.12
PCF11-202ENST00000528336 ZEB2O60315 1214 aa8.05□□□□□ -1.12
PCF11-202ENST00000528336 CPEP16870 476 aa8.05□□□□□ -1.12
PCF11-202ENST00000528336 POU3F3P20264 500 aaPredicted RBP8.05□□□□□ -1.12
PCF11-202ENST00000528336 RGS3P49796 1198 aa8.05□□□□□ -1.12
PCF11-202ENST00000528336 CD83Q01151 205 aa8.05□□□□□ -1.12
PCF11-202ENST00000528336 ALDH6A1Q02252 535 aaKnown RBP8.05□□□□□ -1.12
PCF11-202ENST00000528336 ADCY1Q08828 1119 aa8.05□□□□□ -1.12
PCF11-202ENST00000528336 STAT4Q14765 748 aa8.05□□□□□ -1.12
PCF11-202ENST00000528336 RGL3Q3MIN7 710 aa8.05□□□□□ -1.12
PCF11-202ENST00000528336 TTC38Q5R3I4 469 aa8.05□□□□□ -1.12
PCF11-202ENST00000528336 BROXQ5VW32 411 aa8.05□□□□□ -1.12
PCF11-202ENST00000528336 PRAMEF9Q5VWM5 478 aa8.05□□□□□ -1.12
PCF11-202ENST00000528336 SLFN12LQ6IEE8 588 aa8.05□□□□□ -1.12
PCF11-202ENST00000528336 LHFPL2Q6ZUX7 228 aa8.05□□□□□ -1.12
PCF11-202ENST00000528336 SIAH1Q8IUQ4 282 aa8.05□□□□□ -1.12
PCF11-202ENST00000528336 ZZZ3Q8IYH5 903 aa8.05□□□□□ -1.12
PCF11-202ENST00000528336 MARCH10Q8NA82 808 aaPredicted RBP8.05□□□□□ -1.12
PCF11-202ENST00000528336 SLC5A5Q92911 643 aa8.05□□□□□ -1.12
PCF11-202ENST00000528336 SCYL1Q96KG9 808 aa8.05□□□□□ -1.12
PCF11-202ENST00000528336 FOXB1Q99853 325 aa8.05□□□□□ -1.12
PCF11-202ENST00000528336 KRTAP4-12Q9BQ66 201 aa8.05□□□□□ -1.12
PCF11-202ENST00000528336 BRINP1O60477 761 aa8.04□□□□□ -1.12
PCF11-202ENST00000528336 RAB11FIP3O75154 756 aa8.04□□□□□ -1.12
PCF11-202ENST00000528336 KLHL18O94889 574 aa8.04□□□□□ -1.12
PCF11-202ENST00000528336 CHGBP05060 677 aa8.04□□□□□ -1.12
PCF11-202ENST00000528336 CD40P25942 277 aa8.04□□□□□ -1.12
PCF11-202ENST00000528336 LSP1P33241 339 aa8.04□□□□□ -1.12
PCF11-202ENST00000528336 ROM1Q03395 351 aa8.04□□□□□ -1.12
PCF11-202ENST00000528336 NT5DC1Q5TFE4 455 aa8.04□□□□□ -1.12
PCF11-202ENST00000528336 TIGD7Q6NT04 549 aaPredicted RBP8.04□□□□□ -1.12
PCF11-202ENST00000528336 HDGFL2Q7Z4V5 671 aaPredicted RBP8.04□□□□□ -1.12
PCF11-202ENST00000528336 C7orf31Q8N865 590 aa8.04□□□□□ -1.12
PCF11-202ENST00000528336 MAML3Q96JK9 1138 aa8.04□□□□□ -1.12
PCF11-202ENST00000528336 YTHDC1Q96MU7 727 aaKnown RBP8.04□□□□□ -1.12
PCF11-202ENST00000528336 POFUT1Q9H488 388 aa8.04□□□□□ -1.12
PCF11-202ENST00000528336 ZCCHC4Q9H5U6 513 aa8.04□□□□□ -1.12
PCF11-202ENST00000528336 ZDHHC9Q9Y397 364 aa8.04□□□□□ -1.12
PCF11-202ENST00000528336 SASH1O94885 1247 aa8.03□□□□□ -1.12
PCF11-202ENST00000528336 EYA4O95677 639 aa8.03□□□□□ -1.12
PCF11-202ENST00000528336 PRLP01236 227 aa8.03□□□□□ -1.12
PCF11-202ENST00000528336 APEX1P27695 318 aaKnown RBP8.03□□□□□ -1.12
PCF11-202ENST00000528336 TMPRSS15P98073 1019 aa8.03□□□□□ -1.12
PCF11-202ENST00000528336 LRRC32Q14392 662 aa8.03□□□□□ -1.12
PCF11-202ENST00000528336 STILQ15468 1287 aa8.03□□□□□ -1.12
PCF11-202ENST00000528336 TERF2Q15554 542 aa8.03□□□□□ -1.12
PCF11-202ENST00000528336 DDX42Q86XP3 938 aaKnown RBP eCLIP8.03□□□□□ -1.12
PCF11-202ENST00000528336 SP8Q8IXZ3 490 aa8.03□□□□□ -1.12
PCF11-202ENST00000528336 ZDHHC14Q8IZN3 488 aa8.03□□□□□ -1.12
PCF11-202ENST00000528336 FEZF2Q8TBJ5 459 aa8.03□□□□□ -1.12
PCF11-202ENST00000528336 WDR66Q8TBY9 1149 aa8.03□□□□□ -1.12
PCF11-202ENST00000528336 LUC7LQ9NQ29 371 aaKnown RBP8.03□□□□□ -1.12
PCF11-202ENST00000528336 MSRAQ9UJ68 235 aa8.03□□□□□ -1.12
PCF11-202ENST00000528336 CDC42EP3Q9UKI2 254 aa8.03□□□□□ -1.12
PCF11-202ENST00000528336 APOBEC2Q9Y235 224 aaKnown RBP8.03□□□□□ -1.12
PCF11-202ENST00000528336 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP8.02□□□□□ -1.13
PCF11-202ENST00000528336 KRTAP9-1A8MXZ3 250 aaPredicted RBP8.02□□□□□ -1.13
PCF11-202ENST00000528336 GJA9P57773 515 aa8.02□□□□□ -1.13
PCF11-202ENST00000528336 NOLC1Q14978 699 aaKnown RBP eCLIP8.02□□□□□ -1.13
PCF11-202ENST00000528336 FAM26FQ5R3K3 315 aa8.02□□□□□ -1.13
PCF11-202ENST00000528336 KANK2Q63ZY3 851 aa8.02□□□□□ -1.13
PCF11-202ENST00000528336 CXXC5Q7LFL8 322 aaKnown RBP8.02□□□□□ -1.13
PCF11-202ENST00000528336 OTOP2Q7RTS6 562 aa8.02□□□□□ -1.13
PCF11-202ENST00000528336 PHYKPLQ8IUZ5 450 aa8.02□□□□□ -1.13
PCF11-202ENST00000528336 ZNF610Q8N9Z0 462 aa8.02□□□□□ -1.13
PCF11-202ENST00000528336 ZNF496Q96IT1 587 aaPredicted RBP8.02□□□□□ -1.13
PCF11-202ENST00000528336 LCORQ96JN0 433 aaPredicted RBP8.02□□□□□ -1.13
PCF11-202ENST00000528336 MYL10Q9BUA6 226 aa8.02□□□□□ -1.13
PCF11-202ENST00000528336 SEMA4AQ9H3S1 761 aa8.02□□□□□ -1.13
PCF11-202ENST00000528336 USP40Q9NVE5 1235 aa8.02□□□□□ -1.13
PCF11-202ENST00000528336 MAGEL2Q9UJ55 1249 aa8.02□□□□□ -1.13
PCF11-202ENST00000528336 NOC2LQ9Y3T9 749 aaKnown RBP8.02□□□□□ -1.13
PCF11-202ENST00000528336 KRTAP9-6A0A140TA67 174 aa8.01□□□□□ -1.13
PCF11-202ENST00000528336 NOBOXO60393 691 aa8.01□□□□□ -1.13
PCF11-202ENST00000528336 PRPF6O94906 941 aaKnown RBP8.01□□□□□ -1.13
PCF11-202ENST00000528336 KCNQ1P51787 676 aa8.01□□□□□ -1.13
PCF11-202ENST00000528336 AMPD3Q01432 767 aa8.01□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms