RNA–Protein interactions for RNA: ENST00000525504.5

CCDC90B-204, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 3

Gene CCDC90B, Length 1,232 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-204ENST00000525504 GNAQP50148 359 aa6.88□□□□□ -1.31
CCDC90B-204ENST00000525504 EXOSC10Q01780 885 aaKnown RBP6.88□□□□□ -1.31
CCDC90B-204ENST00000525504 RBL2Q08999 1139 aa6.88□□□□□ -1.31
CCDC90B-204ENST00000525504 COL9A3Q14050 684 aaPredicted RBP6.88□□□□□ -1.31
CCDC90B-204ENST00000525504 UBAP2LQ14157 1087 aaKnown RBP6.88□□□□□ -1.31
CCDC90B-204ENST00000525504 GPNMBQ14956 572 aa6.88□□□□□ -1.31
CCDC90B-204ENST00000525504 DGKDQ16760 1214 aa6.88□□□□□ -1.31
CCDC90B-204ENST00000525504 LY6KQ17RY6 165 aa6.88□□□□□ -1.31
CCDC90B-204ENST00000525504 CELF3Q5SZQ8 465 aaKnown RBP6.88□□□□□ -1.31
CCDC90B-204ENST00000525504 CREB3L3Q68CJ9 461 aa6.88□□□□□ -1.31
CCDC90B-204ENST00000525504 XRRA1Q6P2D8 792 aa6.88□□□□□ -1.31
CCDC90B-204ENST00000525504 CENPQQ7L2Z9 268 aaPredicted RBP6.88□□□□□ -1.31
CCDC90B-204ENST00000525504 CHST3Q7LGC8 479 aa6.88□□□□□ -1.31
CCDC90B-204ENST00000525504 SGMS1Q86VZ5 419 aa6.88□□□□□ -1.31
CCDC90B-204ENST00000525504 TEX2Q8IWB9 1127 aa6.88□□□□□ -1.31
CCDC90B-204ENST00000525504 PPTC7Q8NI37 304 aa6.88□□□□□ -1.31
CCDC90B-204ENST00000525504 ADAM32Q8TC27 787 aa6.88□□□□□ -1.31
CCDC90B-204ENST00000525504 KCNB2Q92953 911 aa6.88□□□□□ -1.31
CCDC90B-204ENST00000525504 TIFAQ96CG3 184 aa6.88□□□□□ -1.31
CCDC90B-204ENST00000525504 TMEM87BQ96K49 555 aa6.88□□□□□ -1.31
CCDC90B-204ENST00000525504 PPP1R12CQ9BZL4 782 aa6.88□□□□□ -1.31
CCDC90B-204ENST00000525504 CXXC1Q9P0U4 656 aaPredicted RBP6.88□□□□□ -1.31
CCDC90B-204ENST00000525504 A0A1W2PRU2 124 aa6.87□□□□□ -1.31
CCDC90B-204ENST00000525504 MEIS2O14770 477 aa6.87□□□□□ -1.31
CCDC90B-204ENST00000525504 PRC1O43663 620 aa6.87□□□□□ -1.31
CCDC90B-204ENST00000525504 AP1G2O75843 785 aa6.87□□□□□ -1.31
CCDC90B-204ENST00000525504 STAM2O75886 525 aa6.87□□□□□ -1.31
CCDC90B-204ENST00000525504 F2P00734 622 aa6.87□□□□□ -1.31
CCDC90B-204ENST00000525504 PFKMP08237 780 aa6.87□□□□□ -1.31
CCDC90B-204ENST00000525504 IQCF3P0C7M6 154 aa6.87□□□□□ -1.31
CCDC90B-204ENST00000525504 HOXA13P31271 388 aaPredicted RBP6.87□□□□□ -1.31
CCDC90B-204ENST00000525504 CCL23P55773 120 aa6.87□□□□□ -1.31
CCDC90B-204ENST00000525504 MRPS9P82933 396 aaKnown RBP6.87□□□□□ -1.31
CCDC90B-204ENST00000525504 SP2Q02086 613 aa6.87□□□□□ -1.31
CCDC90B-204ENST00000525504 PTK2Q05397 1052 aa6.87□□□□□ -1.31
CCDC90B-204ENST00000525504 PGM5Q15124 567 aa6.87□□□□□ -1.31
CCDC90B-204ENST00000525504 ZNF654Q8IZM8 581 aa6.87□□□□□ -1.31
CCDC90B-204ENST00000525504 SRBD1Q8N5C6 995 aaKnown RBP6.87□□□□□ -1.31
CCDC90B-204ENST00000525504 IL31RAQ8NI17 732 aa6.87□□□□□ -1.31
CCDC90B-204ENST00000525504 PHOSPHO2Q8TCD6 241 aa6.87□□□□□ -1.31
CCDC90B-204ENST00000525504 INPP4AQ96PE3 977 aaPredicted RBP6.87□□□□□ -1.31
CCDC90B-204ENST00000525504 PBX4Q9BYU1 374 aa6.87□□□□□ -1.31
CCDC90B-204ENST00000525504 ZNF576Q9H609 170 aa6.87□□□□□ -1.31
CCDC90B-204ENST00000525504 MRVI1Q9Y6F6 885 aa6.87□□□□□ -1.31
CCDC90B-204ENST00000525504 SMCHD1A6NHR9 2005 aa6.87□□□□□ -1.31
CCDC90B-204ENST00000525504 ALPK3Q96L96 1907 aa6.86□□□□□ -1.31
CCDC90B-204ENST00000525504 GRXCR1A8MXD5 290 aa6.86□□□□□ -1.31
CCDC90B-204ENST00000525504 ESPNB1AK53 854 aa6.86□□□□□ -1.31
CCDC90B-204ENST00000525504 PARNO95453 639 aaKnown RBP6.86□□□□□ -1.31
CCDC90B-204ENST00000525504 CXCL10P02778 98 aa6.86□□□□□ -1.31
CCDC90B-204ENST00000525504 H2AFB1P0C5Y9 115 aa6.86□□□□□ -1.31
CCDC90B-204ENST00000525504 H2AFB2P0C5Z0 115 aa6.86□□□□□ -1.31
CCDC90B-204ENST00000525504 CALM1P0DP23 149 aa6.86□□□□□ -1.31
CCDC90B-204ENST00000525504 CALM2P0DP24 149 aa6.86□□□□□ -1.31
CCDC90B-204ENST00000525504 CALM3P0DP25 149 aa6.86□□□□□ -1.31
CCDC90B-204ENST00000525504 HOXC8P31273 242 aa6.86□□□□□ -1.31
CCDC90B-204ENST00000525504 BFSP2Q13515 415 aa6.86□□□□□ -1.31
CCDC90B-204ENST00000525504 RAB30Q15771 203 aa6.86□□□□□ -1.31
CCDC90B-204ENST00000525504 TRIM71Q2Q1W2 868 aaKnown RBP6.86□□□□□ -1.31
CCDC90B-204ENST00000525504 HSDL1Q3SXM5 330 aa6.86□□□□□ -1.31
CCDC90B-204ENST00000525504 CASC1Q6TDU7 716 aa6.86□□□□□ -1.31
CCDC90B-204ENST00000525504 CHSY3Q70JA7 882 aa6.86□□□□□ -1.31
CCDC90B-204ENST00000525504 DHX32Q7L7V1 743 aaKnown RBP6.86□□□□□ -1.31
CCDC90B-204ENST00000525504 OTOP2Q7RTS6 562 aa6.86□□□□□ -1.31
CCDC90B-204ENST00000525504 TAS1R3Q7RTX0 852 aa6.86□□□□□ -1.31
CCDC90B-204ENST00000525504 HOMER1Q86YM7 354 aa6.86□□□□□ -1.31
CCDC90B-204ENST00000525504 DHX37Q8IY37 1157 aaKnown RBP6.86□□□□□ -1.31
CCDC90B-204ENST00000525504 FANCBQ8NB91 859 aa6.86□□□□□ -1.31
CCDC90B-204ENST00000525504 CTCFLQ8NI51 663 aaPredicted RBP6.86□□□□□ -1.31
CCDC90B-204ENST00000525504 CAGE1Q8TC20 777 aa6.86□□□□□ -1.31
CCDC90B-204ENST00000525504 DHX38Q92620 1227 aaKnown RBP6.86□□□□□ -1.31
CCDC90B-204ENST00000525504 RRP36Q96EU6 259 aaKnown RBP6.86□□□□□ -1.31
CCDC90B-204ENST00000525504 FAM161BQ96MY7 647 aa6.86□□□□□ -1.31
CCDC90B-204ENST00000525504 SENP7Q9BQF6 1050 aa6.86□□□□□ -1.31
CCDC90B-204ENST00000525504 C16orf70Q9BSU1 422 aa6.86□□□□□ -1.31
CCDC90B-204ENST00000525504 MTIF3Q9H2K0 278 aaKnown RBP6.86□□□□□ -1.31
CCDC90B-204ENST00000525504 GTF2IRD1Q9UHL9 959 aa6.86□□□□□ -1.31
CCDC90B-204ENST00000525504 MYH7P12883 1935 aa6.86□□□□□ -1.31
CCDC90B-204ENST00000525504 PARP14Q460N5 1801 aa6.85□□□□□ -1.31
CCDC90B-204ENST00000525504 DLL1O00548 723 aa6.85□□□□□ -1.31
CCDC90B-204ENST00000525504 PLEKHA8P1O95397 391 aa6.85□□□□□ -1.31
CCDC90B-204ENST00000525504 GGPS1O95749 300 aa6.85□□□□□ -1.31
CCDC90B-204ENST00000525504 MYCLP12524 364 aaPredicted RBP6.85□□□□□ -1.31
CCDC90B-204ENST00000525504 POU3F3P20264 500 aaPredicted RBP6.85□□□□□ -1.31
CCDC90B-204ENST00000525504 UBA1P22314 1058 aaKnown RBP6.85□□□□□ -1.31
CCDC90B-204ENST00000525504 CCND2P30279 289 aa6.85□□□□□ -1.31
CCDC90B-204ENST00000525504 RCAN1P53805 252 aa6.85□□□□□ -1.31
CCDC90B-204ENST00000525504 SEMA3FQ13275 785 aa6.85□□□□□ -1.31
CCDC90B-204ENST00000525504 PTK7Q13308 1070 aa6.85□□□□□ -1.31
CCDC90B-204ENST00000525504 NEDD9Q14511 834 aa6.85□□□□□ -1.31
CCDC90B-204ENST00000525504 PTGISQ16647 500 aa6.85□□□□□ -1.31
CCDC90B-204ENST00000525504 RNF20Q5VTR2 975 aa6.85□□□□□ -1.31
CCDC90B-204ENST00000525504 PCNX4Q63HM2 1172 aa6.85□□□□□ -1.31
CCDC90B-204ENST00000525504 GDF6Q6KF10 455 aaPredicted RBP6.85□□□□□ -1.31
CCDC90B-204ENST00000525504 USP17L6PQ6QN14 398 aa6.85□□□□□ -1.31
CCDC90B-204ENST00000525504 METTL7BQ6UX53 244 aa6.85□□□□□ -1.31
CCDC90B-204ENST00000525504 TMTC3Q6ZXV5 915 aa6.85□□□□□ -1.31
CCDC90B-204ENST00000525504 FCHSD1Q86WN1 690 aa6.85□□□□□ -1.31
CCDC90B-204ENST00000525504 FBXL16Q8N461 479 aa6.85□□□□□ -1.31
CCDC90B-204ENST00000525504 RETREG2Q8NC44 543 aa6.85□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms