RNA–Protein interactions for RNA: ENST00000522658.5

PABPC1-220, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 2

Gene PABPC1, Length 736 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-220ENST00000522658 FBXO16Q8IX29 292 aaPredicted RBP7.36□□□□□ -1.23
PABPC1-220ENST00000522658 ETFBKMTQ8IXQ9 262 aa7.36□□□□□ -1.23
PABPC1-220ENST00000522658 PANK1Q8TE04 598 aa7.36□□□□□ -1.23
PABPC1-220ENST00000522658 APPBP2Q92624 585 aa7.36□□□□□ -1.23
PABPC1-220ENST00000522658 CHMP4CQ96CF2 233 aa7.36□□□□□ -1.23
PABPC1-220ENST00000522658 SLC9A7Q96T83 725 aa7.36□□□□□ -1.23
PABPC1-220ENST00000522658 MRPL18Q9H0U6 180 aaKnown RBP7.36□□□□□ -1.23
PABPC1-220ENST00000522658 NAPBQ9H115 298 aa7.36□□□□□ -1.23
PABPC1-220ENST00000522658 AKTIPQ9H8T0 292 aa7.36□□□□□ -1.23
PABPC1-220ENST00000522658 ADD3Q9UEY8 706 aaKnown RBP7.36□□□□□ -1.23
PABPC1-220ENST00000522658 CCPG1Q9ULG6 757 aa7.36□□□□□ -1.23
PABPC1-220ENST00000522658 SYNPO2Q9UMS6 1093 aa7.36□□□□□ -1.23
PABPC1-220ENST00000522658 RIPK3Q9Y572 518 aa7.36□□□□□ -1.23
PABPC1-220ENST00000522658 ZNFX1Q9P2E3 1918 aaKnown RBP7.36□□□□□ -1.23
PABPC1-220ENST00000522658 PRUNE2Q8WUY3 3088 aa7.36□□□□□ -1.23
PABPC1-220ENST00000522658 MYH7P12883 1935 aa7.35□□□□□ -1.23
PABPC1-220ENST00000522658 C11orf97A0A1B0GVM6 126 aaPredicted RBP7.35□□□□□ -1.23
PABPC1-220ENST00000522658 PTPDC1A2A3K4 754 aa7.35□□□□□ -1.23
PABPC1-220ENST00000522658 GPAA1O43292 621 aa7.35□□□□□ -1.23
PABPC1-220ENST00000522658 B4GALT4O60513 344 aa7.35□□□□□ -1.23
PABPC1-220ENST00000522658 PRDM1O75626 825 aa7.35□□□□□ -1.23
PABPC1-220ENST00000522658 ALX3O95076 343 aa7.35□□□□□ -1.23
PABPC1-220ENST00000522658 MYL3P08590 195 aa7.35□□□□□ -1.23
PABPC1-220ENST00000522658 CDK7P50613 346 aa7.35□□□□□ -1.23
PABPC1-220ENST00000522658 RABGGTBP53611 331 aa7.35□□□□□ -1.23
PABPC1-220ENST00000522658 BFSP2Q13515 415 aa7.35□□□□□ -1.23
PABPC1-220ENST00000522658 PPP2R5BQ15173 497 aa7.35□□□□□ -1.23
PABPC1-220ENST00000522658 TRIP4Q15650 581 aaPredicted RBP7.35□□□□□ -1.23
PABPC1-220ENST00000522658 OCLNQ16625 522 aa7.35□□□□□ -1.23
PABPC1-220ENST00000522658 SBK1Q52WX2 424 aa7.35□□□□□ -1.23
PABPC1-220ENST00000522658 FAM26DQ5JW98 314 aa7.35□□□□□ -1.23
PABPC1-220ENST00000522658 CCSAPQ6IQ19 270 aaPredicted RBP7.35□□□□□ -1.23
PABPC1-220ENST00000522658 KIAA1211Q6ZU35 1233 aa7.35□□□□□ -1.23
PABPC1-220ENST00000522658 GMCL1P1Q8NEA9 526 aa7.35□□□□□ -1.23
PABPC1-220ENST00000522658 OR6J1Q8NGC5 347 aa7.35□□□□□ -1.23
PABPC1-220ENST00000522658 CEP95Q96GE4 821 aa7.35□□□□□ -1.23
PABPC1-220ENST00000522658 SCLYQ96I15 445 aa7.35□□□□□ -1.23
PABPC1-220ENST00000522658 NSUN5Q96P11 429 aaKnown RBP7.35□□□□□ -1.23
PABPC1-220ENST00000522658 NOC4LQ9BVI4 516 aaKnown RBP7.35□□□□□ -1.23
PABPC1-220ENST00000522658 PUS7LQ9H0K6 701 aaKnown RBP7.35□□□□□ -1.23
PABPC1-220ENST00000522658 SRA1Q9HD15 236 aaKnown RBP7.35□□□□□ -1.23
PABPC1-220ENST00000522658 VTA1Q9NP79 307 aa7.35□□□□□ -1.23
PABPC1-220ENST00000522658 A1CFQ9NQ94 594 aaKnown RBP7.35□□□□□ -1.23
PABPC1-220ENST00000522658 TOMM22Q9NS69 142 aa7.35□□□□□ -1.23
PABPC1-220ENST00000522658 STX8Q9UNK0 236 aa7.35□□□□□ -1.23
PABPC1-220ENST00000522658 COG5Q9UP83 839 aa7.35□□□□□ -1.23
PABPC1-220ENST00000522658 YBX2Q9Y2T7 364 aaKnown RBP7.35□□□□□ -1.23
PABPC1-220ENST00000522658 TNKSO95271 1327 aa7.34□□□□□ -1.23
PABPC1-220ENST00000522658 SMCHD1A6NHR9 2005 aa7.34□□□□□ -1.23
PABPC1-220ENST00000522658 ERC2O15083 957 aa7.34□□□□□ -1.23
PABPC1-220ENST00000522658 CD4P01730 458 aa7.34□□□□□ -1.23
PABPC1-220ENST00000522658 CA3P07451 260 aa7.34□□□□□ -1.23
PABPC1-220ENST00000522658 RFC2P35250 354 aa7.34□□□□□ -1.23
PABPC1-220ENST00000522658 PSMC6P62333 389 aa7.34□□□□□ -1.23
PABPC1-220ENST00000522658 CNTN2Q02246 1040 aa7.34□□□□□ -1.23
PABPC1-220ENST00000522658 SWI5Q1ZZU3 235 aa7.34□□□□□ -1.23
PABPC1-220ENST00000522658 TMEM31Q5JXX7 168 aa7.34□□□□□ -1.23
PABPC1-220ENST00000522658 RASIP1Q5U651 963 aa7.34□□□□□ -1.23
PABPC1-220ENST00000522658 IQSEC1Q6DN90 963 aa7.34□□□□□ -1.23
PABPC1-220ENST00000522658 IL22RA1Q8N6P7 574 aa7.34□□□□□ -1.23
PABPC1-220ENST00000522658 STAG1Q8WVM7 1258 aa7.34□□□□□ -1.23
PABPC1-220ENST00000522658 ARNTL2Q8WYA1 636 aa7.34□□□□□ -1.23
PABPC1-220ENST00000522658 SAP130Q9H0E3 1048 aa7.34□□□□□ -1.23
PABPC1-220ENST00000522658 TRPV6Q9H1D0 765 aa7.34□□□□□ -1.23
PABPC1-220ENST00000522658 ALDH8A1Q9H2A2 487 aaPredicted RBP7.34□□□□□ -1.23
PABPC1-220ENST00000522658 ECHDC1Q9NTX5 307 aa7.34□□□□□ -1.23
PABPC1-220ENST00000522658 MTMR4Q9NYA4 1195 aa7.34□□□□□ -1.23
PABPC1-220ENST00000522658 RAPGEFL1Q9UHV5 662 aa7.34□□□□□ -1.23
PABPC1-220ENST00000522658 NOVA2Q9UNW9 492 aaKnown RBP7.34□□□□□ -1.23
PABPC1-220ENST00000522658 Q9Y3F1 56 aa7.34□□□□□ -1.23
PABPC1-220ENST00000522658 MYH4Q9Y623 1939 aa7.34□□□□□ -1.23
PABPC1-220ENST00000522658 PLIN4Q96Q06 1357 aa7.33□□□□□ -1.24
PABPC1-220ENST00000522658 UMODL1Q5DID0 1318 aa7.33□□□□□ -1.24
PABPC1-220ENST00000522658 NKRFO15226 690 aaKnown RBP eCLIP7.33□□□□□ -1.24
PABPC1-220ENST00000522658 ADCY6O43306 1168 aa7.33□□□□□ -1.24
PABPC1-220ENST00000522658 GHRHP01286 108 aa7.33□□□□□ -1.24
PABPC1-220ENST00000522658 TFAP4Q01664 338 aa7.33□□□□□ -1.24
PABPC1-220ENST00000522658 TFF2Q03403 129 aa7.33□□□□□ -1.24
PABPC1-220ENST00000522658 GDF6Q6KF10 455 aaPredicted RBP7.33□□□□□ -1.24
PABPC1-220ENST00000522658 C16orf59Q7L2K0 433 aa7.33□□□□□ -1.24
PABPC1-220ENST00000522658 MAP4K3Q8IVH8 894 aa7.33□□□□□ -1.24
PABPC1-220ENST00000522658 FAM133AQ8N9E0 248 aa7.33□□□□□ -1.24
PABPC1-220ENST00000522658 KBTBD3Q8NAB2 608 aa7.33□□□□□ -1.24
PABPC1-220ENST00000522658 PRIMPOLQ96LW4 560 aa7.33□□□□□ -1.24
PABPC1-220ENST00000522658 NECAB3Q96P71 396 aaPredicted RBP7.33□□□□□ -1.24
PABPC1-220ENST00000522658 STRBPQ96SI9 672 aaKnown RBP7.33□□□□□ -1.24
PABPC1-220ENST00000522658 MTG1Q9BT17 334 aaPredicted RBP7.33□□□□□ -1.24
PABPC1-220ENST00000522658 FSD1Q9BTV5 496 aa7.33□□□□□ -1.24
PABPC1-220ENST00000522658 CERS4Q9HA82 394 aa7.33□□□□□ -1.24
PABPC1-220ENST00000522658 PNMA2Q9UL42 364 aa7.33□□□□□ -1.24
PABPC1-220ENST00000522658 GNEQ9Y223 722 aaKnown RBP7.33□□□□□ -1.24
PABPC1-220ENST00000522658 LRRC37A2A6NM11 1700 aa7.32□□□□□ -1.24
PABPC1-220ENST00000522658 SPTBN5Q9NRC6 3674 aaKnown RBP7.32□□□□□ -1.24
PABPC1-220ENST00000522658 ZNF536O15090 1300 aa7.32□□□□□ -1.24
PABPC1-220ENST00000522658 GSG1L2A8MUP6 293 aa7.32□□□□□ -1.24
PABPC1-220ENST00000522658 SMIM22K7EJ46 135 aa7.32□□□□□ -1.24
PABPC1-220ENST00000522658 TM4SF5O14894 197 aa7.32□□□□□ -1.24
PABPC1-220ENST00000522658 RNF113AO15541 343 aaKnown RBP7.32□□□□□ -1.24
PABPC1-220ENST00000522658 RANBP6O60518 1105 aaKnown RBP7.32□□□□□ -1.24
PABPC1-220ENST00000522658 KPNA6O60684 536 aa7.32□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms