RNA–Protein interactions for RNA: ENST00000522243.5

SDCBP-209, Transcript of syndecan binding protein, humanhuman

TSL 5

Gene SDCBP, Length 556 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-209ENST00000522243 M0R2N6 131 aa23.41■■□□□ 1.34
SDCBP-209ENST00000522243 TNFRSF10AO00220 468 aa23.41■■□□□ 1.34
SDCBP-209ENST00000522243 GAS7O60861 476 aa23.41■■□□□ 1.34
SDCBP-209ENST00000522243 TDP2O95551 362 aa23.41■■□□□ 1.34
SDCBP-209ENST00000522243 C22orf31O95567 290 aa23.41■■□□□ 1.34
SDCBP-209ENST00000522243 IBSPP21815 317 aaPredicted RBP23.41■■□□□ 1.34
SDCBP-209ENST00000522243 NFX1Q12986 1120 aaKnown RBP23.41■■□□□ 1.34
SDCBP-209ENST00000522243 NPY5RQ15761 445 aa23.41■■□□□ 1.34
SDCBP-209ENST00000522243 NECAB3Q96P71 396 aaPredicted RBP23.41■■□□□ 1.34
SDCBP-209ENST00000522243 UHRF1Q96T88 793 aaPredicted RBP23.41■■□□□ 1.34
SDCBP-209ENST00000522243 C22orf23Q9BZE7 217 aa23.41■■□□□ 1.34
SDCBP-209ENST00000522243 DISC1Q9NRI5 854 aa23.41■■□□□ 1.34
SDCBP-209ENST00000522243 ADGRA3Q8IWK6 1321 aa23.4■■□□□ 1.34
SDCBP-209ENST00000522243 WDR64B1ANS9 1081 aa23.4■■□□□ 1.34
SDCBP-209ENST00000522243 H3BNC9 293 aa23.4■■□□□ 1.34
SDCBP-209ENST00000522243 LRCH2Q5VUJ6 765 aa23.4■■□□□ 1.34
SDCBP-209ENST00000522243 ERICH6BQ5W0A0 696 aa23.4■■□□□ 1.34
SDCBP-209ENST00000522243 METTL13Q8N6R0 699 aa23.4■■□□□ 1.34
SDCBP-209ENST00000522243 DAGLBQ8NCG7 672 aa23.4■■□□□ 1.34
SDCBP-209ENST00000522243 SLC5A5Q92911 643 aa23.4■■□□□ 1.34
SDCBP-209ENST00000522243 TEKT3Q9BXF9 490 aa23.4■■□□□ 1.34
SDCBP-209ENST00000522243 FTHL17Q9BXU8 183 aa23.4■■□□□ 1.34
SDCBP-209ENST00000522243 TMX1Q9H3N1 280 aa23.4■■□□□ 1.34
SDCBP-209ENST00000522243 UNC45AQ9H3U1 944 aa23.4■■□□□ 1.34
SDCBP-209ENST00000522243 RC3H2Q9HBD1 1191 aaKnown RBP23.4■■□□□ 1.34
SDCBP-209ENST00000522243 NOC2LQ9Y3T9 749 aaKnown RBP23.4■■□□□ 1.34
SDCBP-209ENST00000522243 DGKIO75912 1065 aa23.39■■□□□ 1.33
SDCBP-209ENST00000522243 VTNP04004 478 aa23.39■■□□□ 1.33
SDCBP-209ENST00000522243 CTNNB1P35222 781 aa23.39■■□□□ 1.33
SDCBP-209ENST00000522243 BTG3Q14201 252 aaPredicted RBP23.39■■□□□ 1.33
SDCBP-209ENST00000522243 TMEM40Q8WWA1 233 aa23.39■■□□□ 1.33
SDCBP-209ENST00000522243 ZNF689Q96CS4 500 aaPredicted RBP23.39■■□□□ 1.33
SDCBP-209ENST00000522243 MRPL38Q96DV4 380 aaKnown RBP23.39■■□□□ 1.33
SDCBP-209ENST00000522243 RIT2Q99578 217 aa23.39■■□□□ 1.33
SDCBP-209ENST00000522243 GJB4Q9NTQ9 266 aa23.39■■□□□ 1.33
SDCBP-209ENST00000522243 ZNF862O60290 1169 aa23.38■■□□□ 1.33
SDCBP-209ENST00000522243 PFKFB2O60825 505 aa23.38■■□□□ 1.33
SDCBP-209ENST00000522243 RPS6KA5O75582 802 aa23.38■■□□□ 1.33
SDCBP-209ENST00000522243 CLCN3P51790 818 aa23.38■■□□□ 1.33
SDCBP-209ENST00000522243 AK2P54819 239 aa23.38■■□□□ 1.33
SDCBP-209ENST00000522243 UGCGQ16739 394 aa23.38■■□□□ 1.33
SDCBP-209ENST00000522243 PTPROQ16827 1216 aa23.38■■□□□ 1.33
SDCBP-209ENST00000522243 INF2Q27J81 1249 aa23.38■■□□□ 1.33
SDCBP-209ENST00000522243 KIZQ2M2Z5 673 aa23.38■■□□□ 1.33
SDCBP-209ENST00000522243 Q4G0T1 1027 aa23.38■■□□□ 1.33
SDCBP-209ENST00000522243 OSMRQ99650 979 aa23.38■■□□□ 1.33
SDCBP-209ENST00000522243 ERVK-5Q9HDB9 667 aa23.38■■□□□ 1.33
SDCBP-209ENST00000522243 CEP131Q9UPN4 1083 aa23.38■■□□□ 1.33
SDCBP-209ENST00000522243 PSMD10O75832 226 aa23.37■■□□□ 1.33
SDCBP-209ENST00000522243 CDKL5O76039 1030 aa23.37■■□□□ 1.33
SDCBP-209ENST00000522243 LINC00271P0C7V0 271 aa23.37■■□□□ 1.33
SDCBP-209ENST00000522243 PRKCEQ02156 737 aa23.37■■□□□ 1.33
SDCBP-209ENST00000522243 NONOQ15233 471 aaKnown RBP eCLIP23.37■■□□□ 1.33
SDCBP-209ENST00000522243 PAN2Q504Q3 1202 aaKnown RBP23.37■■□□□ 1.33
SDCBP-209ENST00000522243 GALNT17Q6IS24 598 aa23.37■■□□□ 1.33
SDCBP-209ENST00000522243 FAM167AQ96KS9 214 aa23.37■■□□□ 1.33
SDCBP-209ENST00000522243 CUL9Q8IWT3 2517 aa23.36■■□□□ 1.33
SDCBP-209ENST00000522243 KIAA1671Q9BY89 1806 aa23.36■■□□□ 1.33
SDCBP-209ENST00000522243 CYP3A7-CYP3A51PA0A087WV96 503 aa23.36■■□□□ 1.33
SDCBP-209ENST00000522243 MGEA5O60502 916 aa23.36■■□□□ 1.33
SDCBP-209ENST00000522243 OATP04181 439 aa23.36■■□□□ 1.33
SDCBP-209ENST00000522243 CYP3A7P24462 503 aa23.36■■□□□ 1.33
SDCBP-209ENST00000522243 BMPR1AP36894 532 aa23.36■■□□□ 1.33
SDCBP-209ENST00000522243 GATMP50440 423 aa23.36■■□□□ 1.33
SDCBP-209ENST00000522243 ANAPC15P60006 121 aa23.36■■□□□ 1.33
SDCBP-209ENST00000522243 EFCAB12Q6NXP0 572 aa23.36■■□□□ 1.33
SDCBP-209ENST00000522243 MIER3Q7Z3K6 550 aa23.36■■□□□ 1.33
SDCBP-209ENST00000522243 KRT25Q7Z3Z0 450 aa23.36■■□□□ 1.33
SDCBP-209ENST00000522243 NPAS4Q8IUM7 802 aa23.36■■□□□ 1.33
SDCBP-209ENST00000522243 LRRC71Q8N4P6 559 aa23.36■■□□□ 1.33
SDCBP-209ENST00000522243 PHF20Q9BVI0 1012 aa23.36■■□□□ 1.33
SDCBP-209ENST00000522243 NRBP2Q9NSY0 501 aa23.36■■□□□ 1.33
SDCBP-209ENST00000522243 ST3GAL5Q9UNP4 418 aa23.36■■□□□ 1.33
SDCBP-209ENST00000522243 REV3LO60673 3130 aa23.36■■□□□ 1.33
SDCBP-209ENST00000522243 MAGEB2O15479 319 aa23.35■■□□□ 1.33
SDCBP-209ENST00000522243 GPR32O75388 356 aa23.35■■□□□ 1.33
SDCBP-209ENST00000522243 CSPG5O95196 566 aa23.35■■□□□ 1.33
SDCBP-209ENST00000522243 CTDNEP1O95476 244 aa23.35■■□□□ 1.33
SDCBP-209ENST00000522243 STAG3L1P0CL83 205 aa23.35■■□□□ 1.33
SDCBP-209ENST00000522243 SFNP31947 248 aa23.35■■□□□ 1.33
SDCBP-209ENST00000522243 JAK3P52333 1124 aa23.35■■□□□ 1.33
SDCBP-209ENST00000522243 LETM2Q2VYF4 491 aa23.35■■□□□ 1.33
SDCBP-209ENST00000522243 CRIPAKQ8N1N5 446 aa23.35■■□□□ 1.33
SDCBP-209ENST00000522243 NECAB1Q8N987 351 aa23.35■■□□□ 1.33
SDCBP-209ENST00000522243 BANK1Q8NDB2 785 aa23.35■■□□□ 1.33
SDCBP-209ENST00000522243 ZNF668Q96K58 619 aaPredicted RBP23.35■■□□□ 1.33
SDCBP-209ENST00000522243 DDX25Q9UHL0 483 aaKnown RBP23.35■■□□□ 1.33
SDCBP-209ENST00000522243 LRFN2Q9ULH4 789 aa23.35■■□□□ 1.33
SDCBP-209ENST00000522243 AKT3Q9Y243 479 aa23.35■■□□□ 1.33
SDCBP-209ENST00000522243 MRPL42Q9Y6G3 142 aaKnown RBP23.35■■□□□ 1.33
SDCBP-209ENST00000522243 ATG2AQ2TAZ0 1938 aa23.35■■□□□ 1.33
SDCBP-209ENST00000522243 TRANK1O15050 2925 aa23.35■■□□□ 1.33
SDCBP-209ENST00000522243 STK36Q9NRP7 1315 aa23.34■■□□□ 1.33
SDCBP-209ENST00000522243 CCDC194A0A1B0GVG4 234 aa23.34■■□□□ 1.33
SDCBP-209ENST00000522243 RB1P06400 928 aa23.34■■□□□ 1.33
SDCBP-209ENST00000522243 CRYBB1P53674 252 aaPredicted RBP23.34■■□□□ 1.33
SDCBP-209ENST00000522243 FAM228AQ86W67 206 aa23.34■■□□□ 1.33
SDCBP-209ENST00000522243 FAM177A1Q8N128 213 aaPredicted RBP23.34■■□□□ 1.33
SDCBP-209ENST00000522243 OXER1Q8TDS5 423 aa23.34■■□□□ 1.33
SDCBP-209ENST00000522243 MBOAT7Q96N66 472 aa23.34■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 85.5 ms