RNA–Protein interactions for RNA: ENST00000520602.5

MCF2-209, Transcript of MCF.2 cell line derived transforming sequence, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene MCF2, Length 3,945 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2-209ENST00000520602 IGKV6D-41A0A0C4DH26 115 aa11.07□□□□□ -0.64
MCF2-209ENST00000520602 NFIBO00712 420 aa11.07□□□□□ -0.64
MCF2-209ENST00000520602 WNT10BO00744 389 aa11.07□□□□□ -0.64
MCF2-209ENST00000520602 EPHB6O15197 1021 aa11.07□□□□□ -0.64
MCF2-209ENST00000520602 FERP16591 822 aa11.07□□□□□ -0.64
MCF2-209ENST00000520602 HOXA7P31268 230 aaPredicted RBP11.07□□□□□ -0.64
MCF2-209ENST00000520602 IRX3P78415 501 aaPredicted RBP11.07□□□□□ -0.64
MCF2-209ENST00000520602 CASP8Q14790 479 aa11.07□□□□□ -0.64
MCF2-209ENST00000520602 IWS1Q96ST2 819 aa11.07□□□□□ -0.64
MCF2-209ENST00000520602 DEFB129Q9H1M3 183 aa11.07□□□□□ -0.64
MCF2-209ENST00000520602 ZNF408Q9H9D4 720 aa11.07□□□□□ -0.64
MCF2-209ENST00000520602 KMT5AQ9NQR1 393 aa11.07□□□□□ -0.64
MCF2-209ENST00000520602 KCNH7Q9NS40 1196 aa11.07□□□□□ -0.64
MCF2-209ENST00000520602 AMFRQ9UKV5 643 aa11.07□□□□□ -0.64
MCF2-209ENST00000520602 PITPNM2Q9BZ72 1349 aa11.07□□□□□ -0.64
MCF2-209ENST00000520602 ABCA3Q99758 1704 aa11.07□□□□□ -0.64
MCF2-209ENST00000520602 LRRIQ4A6NIV6 560 aa11.07□□□□□ -0.64
MCF2-209ENST00000520602 DKC1O60832 514 aaKnown RBP eCLIP11.07□□□□□ -0.64
MCF2-209ENST00000520602 INPP5BP32019 993 aa11.07□□□□□ -0.64
MCF2-209ENST00000520602 GMPSP49915 693 aaPredicted RBP11.07□□□□□ -0.64
MCF2-209ENST00000520602 BAATQ14032 418 aaPredicted RBP11.07□□□□□ -0.64
MCF2-209ENST00000520602 MTERF2Q49AM1 385 aa11.07□□□□□ -0.64
MCF2-209ENST00000520602 GLG1Q92896 1179 aa11.07□□□□□ -0.64
MCF2-209ENST00000520602 DNAJC19Q96DA6 116 aa11.07□□□□□ -0.64
MCF2-209ENST00000520602 MRIQ9BWK5 157 aa11.07□□□□□ -0.64
MCF2-209ENST00000520602 TUFT1Q9NNX1 390 aa11.07□□□□□ -0.64
MCF2-209ENST00000520602 CLEC11AQ9Y240 323 aa11.07□□□□□ -0.64
MCF2-209ENST00000520602 CSADQ9Y600 493 aa11.07□□□□□ -0.64
MCF2-209ENST00000520602 FHOD1Q9Y613 1164 aa11.07□□□□□ -0.64
MCF2-209ENST00000520602 UCHL3P15374 230 aa11.07□□□□□ -0.64
MCF2-209ENST00000520602 IBSPP21815 317 aaPredicted RBP11.07□□□□□ -0.64
MCF2-209ENST00000520602 CASP5P51878 434 aa11.07□□□□□ -0.64
MCF2-209ENST00000520602 EDRF1Q3B7T1 1238 aa11.07□□□□□ -0.64
MCF2-209ENST00000520602 WDR44Q5JSH3 913 aa11.07□□□□□ -0.64
MCF2-209ENST00000520602 TATDN1Q6P1N9 297 aa11.07□□□□□ -0.64
MCF2-209ENST00000520602 GJB7Q6PEY0 223 aa11.07□□□□□ -0.64
MCF2-209ENST00000520602 FRMD5Q7Z6J6 570 aa11.07□□□□□ -0.64
MCF2-209ENST00000520602 LRRC15Q8TF66 581 aa11.07□□□□□ -0.64
MCF2-209ENST00000520602 ZKSCAN4Q969J2 545 aaPredicted RBP11.07□□□□□ -0.64
MCF2-209ENST00000520602 OSBPL9Q96SU4 736 aa11.07□□□□□ -0.64
MCF2-209ENST00000520602 FGFBP2Q9BYJ0 223 aa11.07□□□□□ -0.64
MCF2-209ENST00000520602 IRS2Q9Y4H2 1338 aa11.07□□□□□ -0.64
MCF2-209ENST00000520602 KRIT1O00522 736 aa11.06□□□□□ -0.64
MCF2-209ENST00000520602 NF2P35240 595 aa11.06□□□□□ -0.64
MCF2-209ENST00000520602 LIG4P49917 911 aa11.06□□□□□ -0.64
MCF2-209ENST00000520602 RPS6P62753 249 aaKnown RBP11.06□□□□□ -0.64
MCF2-209ENST00000520602 KCNA1Q09470 495 aa11.06□□□□□ -0.64
MCF2-209ENST00000520602 DNAAF5Q86Y56 855 aa11.06□□□□□ -0.64
MCF2-209ENST00000520602 AGBL3Q8NEM8 1001 aa11.06□□□□□ -0.64
MCF2-209ENST00000520602 UNC45AQ9H3U1 944 aa11.06□□□□□ -0.64
MCF2-209ENST00000520602 NOP56O00567 594 aaKnown RBP11.06□□□□□ -0.64
MCF2-209ENST00000520602 OPA1O60313 960 aa11.06□□□□□ -0.64
MCF2-209ENST00000520602 POLGP54098 1239 aaPredicted RBP11.06□□□□□ -0.64
MCF2-209ENST00000520602 SPDYE2Q495Y8 402 aa11.06□□□□□ -0.64
MCF2-209ENST00000520602 MIIPQ5JXC2 388 aa11.06□□□□□ -0.64
MCF2-209ENST00000520602 WDR59Q6PJI9 974 aa11.06□□□□□ -0.64
MCF2-209ENST00000520602 MOXD1Q6UVY6 613 aa11.06□□□□□ -0.64
MCF2-209ENST00000520602 TAX1BP1Q86VP1 789 aa11.06□□□□□ -0.64
MCF2-209ENST00000520602 DEPTORQ8TB45 409 aa11.06□□□□□ -0.64
MCF2-209ENST00000520602 TAAR1Q96RJ0 339 aa11.06□□□□□ -0.64
MCF2-209ENST00000520602 MXRA8Q9BRK3 442 aa11.06□□□□□ -0.64
MCF2-209ENST00000520602 IMPG2Q9BZV3 1241 aa11.06□□□□□ -0.64
MCF2-209ENST00000520602 TMEM206Q9H813 350 aa11.06□□□□□ -0.64
MCF2-209ENST00000520602 KCNMB3Q9NPA1 279 aa11.06□□□□□ -0.64
MCF2-209ENST00000520602 FZD1Q9UP38 647 aa11.06□□□□□ -0.64
MCF2-209ENST00000520602 CAPN6Q9Y6Q1 641 aa11.06□□□□□ -0.64
MCF2-209ENST00000520602 ANKRD36CQ5JPF3 1778 aa11.06□□□□□ -0.64
MCF2-209ENST00000520602 A0A1W2PQJ5 194 aa11.06□□□□□ -0.64
MCF2-209ENST00000520602 ANO9A1A5B4 782 aa11.06□□□□□ -0.64
MCF2-209ENST00000520602 H2AFXP16104 143 aaPredicted RBP11.06□□□□□ -0.64
MCF2-209ENST00000520602 NPEPPSP55786 919 aa11.06□□□□□ -0.64
MCF2-209ENST00000520602 DRAP1Q14919 205 aaPredicted RBP11.06□□□□□ -0.64
MCF2-209ENST00000520602 Q4G0T1 1027 aa11.06□□□□□ -0.64
MCF2-209ENST00000520602 FMNL3Q8IVF7 1028 aa11.06□□□□□ -0.64
MCF2-209ENST00000520602 ATP6V0A1Q93050 837 aa11.06□□□□□ -0.64
MCF2-209ENST00000520602 ATG4CQ96DT6 458 aa11.06□□□□□ -0.64
MCF2-209ENST00000520602 GOLPH3Q9H4A6 298 aa11.06□□□□□ -0.64
MCF2-209ENST00000520602 EPB41L5Q9HCM4 733 aa11.06□□□□□ -0.64
MCF2-209ENST00000520602 WDR46O15213 610 aaKnown RBP11.05□□□□□ -0.64
MCF2-209ENST00000520602 ZEB2O60315 1214 aa11.05□□□□□ -0.64
MCF2-209ENST00000520602 AKAP3O75969 853 aa11.05□□□□□ -0.64
MCF2-209ENST00000520602 ARHGAP25P42331 645 aa11.05□□□□□ -0.64
MCF2-209ENST00000520602 MXI1P50539 228 aa11.05□□□□□ -0.64
MCF2-209ENST00000520602 DGKZQ13574 1117 aa11.05□□□□□ -0.64
MCF2-209ENST00000520602 PLA2G4FQ68DD2 849 aa11.05□□□□□ -0.64
MCF2-209ENST00000520602 GLYCTKQ8IVS8 523 aa11.05□□□□□ -0.64
MCF2-209ENST00000520602 SYCE1Q8N0S2 351 aa11.05□□□□□ -0.64
MCF2-209ENST00000520602 MS4A14Q96JA4 679 aa11.05□□□□□ -0.64
MCF2-209ENST00000520602 PKNOX2Q96KN3 472 aa11.05□□□□□ -0.64
MCF2-209ENST00000520602 POLR3CQ9BUI4 534 aaPredicted RBP11.05□□□□□ -0.64
MCF2-209ENST00000520602 EDEM3Q9BZQ6 932 aa11.05□□□□□ -0.64
MCF2-209ENST00000520602 EHD2Q9NZN4 543 aa11.05□□□□□ -0.64
MCF2-209ENST00000520602 CALCOCO1Q9P1Z2 691 aa11.05□□□□□ -0.64
MCF2-209ENST00000520602 ANKFY1Q9P2R3 1169 aa11.05□□□□□ -0.64
MCF2-209ENST00000520602 RSPH14Q9UHP6 348 aa11.05□□□□□ -0.64
MCF2-209ENST00000520602 FAN1Q9Y2M0 1017 aa11.05□□□□□ -0.64
MCF2-209ENST00000520602 SMIM23A6NLE4 172 aa11.05□□□□□ -0.64
MCF2-209ENST00000520602 WDR64B1ANS9 1081 aa11.05□□□□□ -0.64
MCF2-209ENST00000520602 ATP8B1O43520 1251 aa11.05□□□□□ -0.64
MCF2-209ENST00000520602 CCND2P30279 289 aa11.05□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms