RNA–Protein interactions for RNA: ENST00000520233.1

SDC2-205, Transcript of syndecan 2, humanhuman

TSL 4

Gene SDC2, Length 563 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC2-205ENST00000520233 CYP26B1Q9NR63 512 aa19.85■□□□□ 0.77
SDC2-205ENST00000520233 SERTAD1Q9UHV2 236 aa19.85■□□□□ 0.77
SDC2-205ENST00000520233 HTTP42858 3142 aa19.85■□□□□ 0.77
SDC2-205ENST00000520233 COL1A2P08123 1366 aa19.84■□□□□ 0.77
SDC2-205ENST00000520233 ACTN4O43707 911 aaKnown RBP19.84■□□□□ 0.77
SDC2-205ENST00000520233 MBD3O95983 291 aa19.84■□□□□ 0.77
SDC2-205ENST00000520233 SLFN14P0C7P3 912 aa19.84■□□□□ 0.77
SDC2-205ENST00000520233 PLA2G4BP0C869 781 aa19.84■□□□□ 0.77
SDC2-205ENST00000520233 SMIM10L2AP0DMW4 78 aa19.84■□□□□ 0.77
SDC2-205ENST00000520233 SMIM10L2BP0DMW5 78 aa19.84■□□□□ 0.77
SDC2-205ENST00000520233 INSRRP14616 1297 aa19.84■□□□□ 0.77
SDC2-205ENST00000520233 SLC12A3P55017 1021 aa19.84■□□□□ 0.77
SDC2-205ENST00000520233 MCM6Q14566 821 aa19.84■□□□□ 0.77
SDC2-205ENST00000520233 NBPF20Q3BBV1 942 aa19.84■□□□□ 0.77
SDC2-205ENST00000520233 LONRF3Q496Y0 759 aa19.84■□□□□ 0.77
SDC2-205ENST00000520233 KRBA2Q6ZNG9 492 aa19.84■□□□□ 0.77
SDC2-205ENST00000520233 CEP57L1Q8IYX8 460 aa19.84■□□□□ 0.77
SDC2-205ENST00000520233 VTI1AQ96AJ9 217 aa19.84■□□□□ 0.77
SDC2-205ENST00000520233 CCDC43Q96MW1 224 aaKnown RBP19.84■□□□□ 0.77
SDC2-205ENST00000520233 TIGD1Q96MW7 591 aa19.84■□□□□ 0.77
SDC2-205ENST00000520233 STARD7Q9NQZ5 370 aa19.84■□□□□ 0.77
SDC2-205ENST00000520233 NRCAMQ92823 1304 aa19.83■□□□□ 0.77
SDC2-205ENST00000520233 MYH9P35579 1960 aaKnown RBP19.83■□□□□ 0.77
SDC2-205ENST00000520233 ARHGEF35A5YM69 484 aa19.83■□□□□ 0.77
SDC2-205ENST00000520233 RRN3P2A6NIE6 340 aa19.83■□□□□ 0.77
SDC2-205ENST00000520233 ZBTB42B2RXF5 422 aa19.83■□□□□ 0.77
SDC2-205ENST00000520233 NPEPPSP55786 919 aa19.83■□□□□ 0.77
SDC2-205ENST00000520233 CHMP4BP1P59074 171 aa19.83■□□□□ 0.77
SDC2-205ENST00000520233 PPFIA1Q13136 1202 aa19.83■□□□□ 0.77
SDC2-205ENST00000520233 ITGA7Q13683 1181 aa19.83■□□□□ 0.77
SDC2-205ENST00000520233 MTERF2Q49AM1 385 aa19.83■□□□□ 0.77
SDC2-205ENST00000520233 SV2BQ7L1I2 683 aa19.83■□□□□ 0.77
SDC2-205ENST00000520233 SESTD1Q86VW0 696 aa19.83■□□□□ 0.77
SDC2-205ENST00000520233 C7orf31Q8N865 590 aa19.83■□□□□ 0.77
SDC2-205ENST00000520233 CNNM3Q8NE01 707 aa19.83■□□□□ 0.77
SDC2-205ENST00000520233 GPT2Q8TD30 523 aa19.83■□□□□ 0.77
SDC2-205ENST00000520233 CEP89Q96ST8 783 aa19.83■□□□□ 0.77
SDC2-205ENST00000520233 DACT1Q9NYF0 836 aa19.83■□□□□ 0.77
SDC2-205ENST00000520233 GRIN2DO15399 1336 aa19.82■□□□□ 0.76
SDC2-205ENST00000520233 A0A0U1RQG5 324 aaPredicted RBP19.82■□□□□ 0.76
SDC2-205ENST00000520233 KINO60870 393 aaKnown RBP19.82■□□□□ 0.76
SDC2-205ENST00000520233 SSBP05455 408 aaKnown RBP eCLIP19.82■□□□□ 0.76
SDC2-205ENST00000520233 PTPN11Q06124 597 aaPredicted RBP19.82■□□□□ 0.76
SDC2-205ENST00000520233 NFKBIBQ15653 356 aa19.82■□□□□ 0.76
SDC2-205ENST00000520233 GRIK4Q16099 956 aa19.82■□□□□ 0.76
SDC2-205ENST00000520233 KANK3Q6NY19 840 aa19.82■□□□□ 0.76
SDC2-205ENST00000520233 NFRKBQ6P4R8 1299 aa19.82■□□□□ 0.76
SDC2-205ENST00000520233 SH2D3AQ9BRG2 576 aa19.82■□□□□ 0.76
SDC2-205ENST00000520233 SEZ6LQ9BYH1 1024 aa19.82■□□□□ 0.76
SDC2-205ENST00000520233 LRRC27Q9C0I9 530 aa19.82■□□□□ 0.76
SDC2-205ENST00000520233 TNMDQ9H2S6 317 aa19.82■□□□□ 0.76
SDC2-205ENST00000520233 SETD4Q9NVD3 440 aa19.82■□□□□ 0.76
SDC2-205ENST00000520233 KBTBD4Q9NVX7 518 aa19.82■□□□□ 0.76
SDC2-205ENST00000520233 HDAC6Q9UBN7 1215 aa19.82■□□□□ 0.76
SDC2-205ENST00000520233 SCN10AQ9Y5Y9 1956 aa19.82■□□□□ 0.76
SDC2-205ENST00000520233 C17orf102A2RUQ5 167 aa19.81■□□□□ 0.76
SDC2-205ENST00000520233 HOXC8P31273 242 aa19.81■□□□□ 0.76
SDC2-205ENST00000520233 RFC5P40937 340 aa19.81■□□□□ 0.76
SDC2-205ENST00000520233 RINT1Q6NUQ1 792 aa19.81■□□□□ 0.76
SDC2-205ENST00000520233 PADI6Q6TGC4 694 aa19.81■□□□□ 0.76
SDC2-205ENST00000520233 EXOC8Q8IYI6 725 aa19.81■□□□□ 0.76
SDC2-205ENST00000520233 SLC43A3Q8NBI5 491 aa19.81■□□□□ 0.76
SDC2-205ENST00000520233 CCDC34Q96HJ3 373 aa19.81■□□□□ 0.76
SDC2-205ENST00000520233 KCND2Q9NZV8 630 aa19.81■□□□□ 0.76
SDC2-205ENST00000520233 GTF2IRD1Q9UHL9 959 aa19.81■□□□□ 0.76
SDC2-205ENST00000520233 MAGEB2O15479 319 aa19.8■□□□□ 0.76
SDC2-205ENST00000520233 MAFO75444 373 aaPredicted RBP19.8■□□□□ 0.76
SDC2-205ENST00000520233 DGAT1O75907 488 aa19.8■□□□□ 0.76
SDC2-205ENST00000520233 GNAT1P11488 350 aa19.8■□□□□ 0.76
SDC2-205ENST00000520233 COL6A1P12109 1028 aa19.8■□□□□ 0.76
SDC2-205ENST00000520233 CYP11B2P19099 503 aa19.8■□□□□ 0.76
SDC2-205ENST00000520233 IGBP1P78318 339 aa19.8■□□□□ 0.76
SDC2-205ENST00000520233 ADAM17P78536 824 aa19.8■□□□□ 0.76
SDC2-205ENST00000520233 AMPD3Q01432 767 aa19.8■□□□□ 0.76
SDC2-205ENST00000520233 TBC1D8BQ0IIM8 1120 aa19.8■□□□□ 0.76
SDC2-205ENST00000520233 DHX8Q14562 1220 aaKnown RBP19.8■□□□□ 0.76
SDC2-205ENST00000520233 C1orf186Q6ZWK4 172 aa19.8■□□□□ 0.76
SDC2-205ENST00000520233 SH3RF1Q7Z6J0 888 aa19.8■□□□□ 0.76
SDC2-205ENST00000520233 GPBP1Q86WP2 473 aa19.8■□□□□ 0.76
SDC2-205ENST00000520233 ELOA2Q8IYF1 753 aaPredicted RBP19.8■□□□□ 0.76
SDC2-205ENST00000520233 PPP1R13LQ8WUF5 828 aa19.8■□□□□ 0.76
SDC2-205ENST00000520233 LMBR1Q8WVP7 490 aa19.8■□□□□ 0.76
SDC2-205ENST00000520233 TRAPPC12Q8WVT3 735 aa19.8■□□□□ 0.76
SDC2-205ENST00000520233 PAGE5Q96GU1 130 aa19.8■□□□□ 0.76
SDC2-205ENST00000520233 ABHD8Q96I13 439 aa19.8■□□□□ 0.76
SDC2-205ENST00000520233 SENP6Q9GZR1 1112 aaPredicted RBP19.8■□□□□ 0.76
SDC2-205ENST00000520233 DHX33Q9H6R0 707 aaKnown RBP19.8■□□□□ 0.76
SDC2-205ENST00000520233 PDLIM7Q9NR12 457 aa19.8■□□□□ 0.76
SDC2-205ENST00000520233 LOXHD1Q8IVV2 1947 aa19.79■□□□□ 0.76
SDC2-205ENST00000520233 ARVCFO00192 962 aa19.79■□□□□ 0.76
SDC2-205ENST00000520233 USO1O60763 962 aaKnown RBP19.79■□□□□ 0.76
SDC2-205ENST00000520233 C22orf31O95567 290 aa19.79■□□□□ 0.76
SDC2-205ENST00000520233 KLRC1P26715 233 aa19.79■□□□□ 0.76
SDC2-205ENST00000520233 POLGP54098 1239 aaPredicted RBP19.79■□□□□ 0.76
SDC2-205ENST00000520233 FAM47CQ5HY64 1035 aa19.79■□□□□ 0.76
SDC2-205ENST00000520233 MARCH8Q5T0T0 291 aa19.79■□□□□ 0.76
SDC2-205ENST00000520233 MTHFD1LQ6UB35 978 aa19.79■□□□□ 0.76
SDC2-205ENST00000520233 DIS3LQ8TF46 1054 aaKnown RBP19.79■□□□□ 0.76
SDC2-205ENST00000520233 SLC7A3Q8WY07 619 aa19.79■□□□□ 0.76
SDC2-205ENST00000520233 MTRQ99707 1265 aa19.79■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 65.7 ms