RNA–Protein interactions for RNA: ENST00000520142.1

PABPC1-214, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 3

Gene PABPC1, Length 754 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-214ENST00000520142 DEFB123Q8N688 67 aa12.51□□□□□ -0.41
PABPC1-214ENST00000520142 FAM167AQ96KS9 214 aa12.51□□□□□ -0.41
PABPC1-214ENST00000520142 SLC9A7Q96T83 725 aa12.51□□□□□ -0.41
PABPC1-214ENST00000520142 TMEM60Q9H2L4 133 aa12.51□□□□□ -0.41
PABPC1-214ENST00000520142 SEMA6BQ9H3T3 888 aa12.51□□□□□ -0.41
PABPC1-214ENST00000520142 WRAP73Q9P2S5 460 aaPredicted RBP12.51□□□□□ -0.41
PABPC1-214ENST00000520142 TCEAL9Q9UHQ7 104 aa12.51□□□□□ -0.41
PABPC1-214ENST00000520142 SQORQ9Y6N5 450 aa12.51□□□□□ -0.41
PABPC1-214ENST00000520142 MYH9P35579 1960 aaKnown RBP12.5□□□□□ -0.41
PABPC1-214ENST00000520142 IGKV6-21A0A0C4DH24 114 aa12.5□□□□□ -0.41
PABPC1-214ENST00000520142 ATP2A2P16615 1042 aaKnown RBP12.5□□□□□ -0.41
PABPC1-214ENST00000520142 GJB2P29033 226 aa12.5□□□□□ -0.41
PABPC1-214ENST00000520142 TRAPPC10P48553 1259 aa12.5□□□□□ -0.41
PABPC1-214ENST00000520142 TOB1P50616 345 aaPredicted RBP12.5□□□□□ -0.41
PABPC1-214ENST00000520142 MRPS6P82932 125 aaKnown RBP12.5□□□□□ -0.41
PABPC1-214ENST00000520142 ORC2Q13416 577 aaPredicted RBP12.5□□□□□ -0.41
PABPC1-214ENST00000520142 LPIN1Q14693 890 aa12.5□□□□□ -0.41
PABPC1-214ENST00000520142 EPHA7Q15375 998 aa12.5□□□□□ -0.41
PABPC1-214ENST00000520142 XKR3Q5GH77 459 aa12.5□□□□□ -0.41
PABPC1-214ENST00000520142 FBXO47Q5MNV8 452 aa12.5□□□□□ -0.41
PABPC1-214ENST00000520142 ANO5Q75V66 913 aa12.5□□□□□ -0.41
PABPC1-214ENST00000520142 RSPH3Q86UC2 560 aa12.5□□□□□ -0.41
PABPC1-214ENST00000520142 C4orf32Q8N8J7 132 aa12.5□□□□□ -0.41
PABPC1-214ENST00000520142 GUCD1Q96NT3 240 aa12.5□□□□□ -0.41
PABPC1-214ENST00000520142 HSD17B14Q9BPX1 270 aa12.5□□□□□ -0.41
PABPC1-214ENST00000520142 NRBP2Q9NSY0 501 aa12.5□□□□□ -0.41
PABPC1-214ENST00000520142 CIZ1Q9ULV3 898 aaPredicted RBP12.5□□□□□ -0.41
PABPC1-214ENST00000520142 CEP131Q9UPN4 1083 aa12.5□□□□□ -0.41
PABPC1-214ENST00000520142 YBX2Q9Y2T7 364 aaKnown RBP12.5□□□□□ -0.41
PABPC1-214ENST00000520142 CDY2AQ9Y6F7 541 aa12.5□□□□□ -0.41
PABPC1-214ENST00000520142 GBF1Q92538 1859 aa12.49□□□□□ -0.41
PABPC1-214ENST00000520142 LOC101059915A0A1B0GWI6 518 aaPredicted RBP12.49□□□□□ -0.41
PABPC1-214ENST00000520142 ZBBXA8MT70 800 aa12.49□□□□□ -0.41
PABPC1-214ENST00000520142 MAGEB2O15479 319 aa12.49□□□□□ -0.41
PABPC1-214ENST00000520142 NEMFO60524 1076 aa12.49□□□□□ -0.41
PABPC1-214ENST00000520142 EFCAB14O75071 495 aa12.49□□□□□ -0.41
PABPC1-214ENST00000520142 PSMC5P62195 406 aa12.49□□□□□ -0.41
PABPC1-214ENST00000520142 NUCB2P80303 420 aa12.49□□□□□ -0.41
PABPC1-214ENST00000520142 DEFB103AP81534 67 aa12.49□□□□□ -0.41
PABPC1-214ENST00000520142 IKBKEQ14164 716 aa12.49□□□□□ -0.41
PABPC1-214ENST00000520142 CALCRLQ16602 461 aa12.49□□□□□ -0.41
PABPC1-214ENST00000520142 IER5Q5VY09 327 aa12.49□□□□□ -0.41
PABPC1-214ENST00000520142 LIN28BQ6ZN17 250 aaKnown RBP eCLIP12.49□□□□□ -0.41
PABPC1-214ENST00000520142 HERC6Q8IVU3 1022 aa12.49□□□□□ -0.41
PABPC1-214ENST00000520142 CKAP2LQ8IYA6 745 aa12.49□□□□□ -0.41
PABPC1-214ENST00000520142 BANK1Q8NDB2 785 aa12.49□□□□□ -0.41
PABPC1-214ENST00000520142 CELF4Q9BZC1 486 aaKnown RBP12.49□□□□□ -0.41
PABPC1-214ENST00000520142 FAM49AQ9H0Q0 323 aaPredicted RBP12.49□□□□□ -0.41
PABPC1-214ENST00000520142 TTC12Q9H892 705 aaPredicted RBP12.49□□□□□ -0.41
PABPC1-214ENST00000520142 AGO3Q9H9G7 860 aaKnown RBP12.49□□□□□ -0.41
PABPC1-214ENST00000520142 CDHR5Q9HBB8 845 aa12.49□□□□□ -0.41
PABPC1-214ENST00000520142 SMC3Q9UQE7 1217 aa12.49□□□□□ -0.41
PABPC1-214ENST00000520142 PCDHA11Q9Y5I1 949 aa12.49□□□□□ -0.41
PABPC1-214ENST00000520142 CDH23Q9H251 3354 aa12.49□□□□□ -0.41
PABPC1-214ENST00000520142 CHD7Q9P2D1 2997 aa12.49□□□□□ -0.41
PABPC1-214ENST00000520142 TMEM150BA6NC51 233 aa12.48□□□□□ -0.41
PABPC1-214ENST00000520142 GPR32O75388 356 aa12.48□□□□□ -0.41
PABPC1-214ENST00000520142 SLITRK3O94933 977 aa12.48□□□□□ -0.41
PABPC1-214ENST00000520142 LYPLA2O95372 231 aa12.48□□□□□ -0.41
PABPC1-214ENST00000520142 BAG4O95429 457 aaKnown RBP12.48□□□□□ -0.41
PABPC1-214ENST00000520142 P4HBP07237 508 aaKnown RBP12.48□□□□□ -0.41
PABPC1-214ENST00000520142 GHRP10912 638 aa12.48□□□□□ -0.41
PABPC1-214ENST00000520142 MYOGP15173 224 aa12.48□□□□□ -0.41
PABPC1-214ENST00000520142 QARSP47897 775 aaKnown RBP12.48□□□□□ -0.41
PABPC1-214ENST00000520142 RABGGTBP53611 331 aa12.48□□□□□ -0.41
PABPC1-214ENST00000520142 RAB30Q15771 203 aa12.48□□□□□ -0.41
PABPC1-214ENST00000520142 ZNF697Q5TEC3 545 aa12.48□□□□□ -0.41
PABPC1-214ENST00000520142 TSHZ1Q6ZSZ6 1077 aa12.48□□□□□ -0.41
PABPC1-214ENST00000520142 C4orf19Q8IY42 314 aa12.48□□□□□ -0.41
PABPC1-214ENST00000520142 CRIPAKQ8N1N5 446 aa12.48□□□□□ -0.41
PABPC1-214ENST00000520142 USP38Q8NB14 1042 aa12.48□□□□□ -0.41
PABPC1-214ENST00000520142 TMEM40Q8WWA1 233 aa12.48□□□□□ -0.41
PABPC1-214ENST00000520142 SEPT8Q92599 483 aa12.48□□□□□ -0.41
PABPC1-214ENST00000520142 APBB2Q92870 758 aa12.48□□□□□ -0.41
PABPC1-214ENST00000520142 TIFAQ96CG3 184 aa12.48□□□□□ -0.41
PABPC1-214ENST00000520142 IFIH1Q9BYX4 1025 aaKnown RBP12.48□□□□□ -0.41
PABPC1-214ENST00000520142 PCDHA12Q9UN75 941 aa12.48□□□□□ -0.41
PABPC1-214ENST00000520142 TRPV2Q9Y5S1 764 aa12.48□□□□□ -0.41
PABPC1-214ENST00000520142 MICAL3Q7RTP6 2002 aa12.47□□□□□ -0.41
PABPC1-214ENST00000520142 MAFO75444 373 aaPredicted RBP12.47□□□□□ -0.41
PABPC1-214ENST00000520142 ARHGEF15O94989 841 aa12.47□□□□□ -0.41
PABPC1-214ENST00000520142 GJB5O95377 273 aa12.47□□□□□ -0.41
PABPC1-214ENST00000520142 MCM7P33993 719 aa12.47□□□□□ -0.41
PABPC1-214ENST00000520142 TXKP42681 527 aa12.47□□□□□ -0.41
PABPC1-214ENST00000520142 TMEM62Q0P6H9 643 aa12.47□□□□□ -0.41
PABPC1-214ENST00000520142 ZNF174Q15697 407 aa12.47□□□□□ -0.41
PABPC1-214ENST00000520142 TTC38Q5R3I4 469 aa12.47□□□□□ -0.41
PABPC1-214ENST00000520142 EFCAB12Q6NXP0 572 aa12.47□□□□□ -0.41
PABPC1-214ENST00000520142 TRMT1LQ7Z2T5 733 aaKnown RBP12.47□□□□□ -0.41
PABPC1-214ENST00000520142 TMCO2Q7Z6W1 182 aaPredicted RBP12.47□□□□□ -0.41
PABPC1-214ENST00000520142 RTN4RL1Q86UN2 441 aaPredicted RBP12.47□□□□□ -0.41
PABPC1-214ENST00000520142 ZNF579Q8NAF0 562 aaKnown RBP12.47□□□□□ -0.41
PABPC1-214ENST00000520142 ADAMTS10Q9H324 1103 aa12.47□□□□□ -0.41
PABPC1-214ENST00000520142 ZNF576Q9H609 170 aa12.47□□□□□ -0.41
PABPC1-214ENST00000520142 RGL1Q9NZL6 768 aa12.47□□□□□ -0.41
PABPC1-214ENST00000520142 COL4A6Q14031 1691 aa12.46□□□□□ -0.41
PABPC1-214ENST00000520142 ZBTB39O15060 712 aa12.46□□□□□ -0.41
PABPC1-214ENST00000520142 SPATA31C1P0DKV0 1188 aa12.46□□□□□ -0.41
PABPC1-214ENST00000520142 KCNJ6P48051 423 aa12.46□□□□□ -0.41
PABPC1-214ENST00000520142 CLCN3P51790 818 aa12.46□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms