RNA–Protein interactions for RNA: ENST00000519684.5

HMGB4-203, Transcript of high mobility group box 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGB4, Length 2,343 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB4-203ENST00000519684 CHMP4BP1P59074 171 aa9.26□□□□□ -0.93
HMGB4-203ENST00000519684 MRPS9P82933 396 aaKnown RBP9.26□□□□□ -0.93
HMGB4-203ENST00000519684 SUPT20HL1Q3ZLR7 823 aa9.26□□□□□ -0.93
HMGB4-203ENST00000519684 TCERG1LQ5VWI1 586 aa9.26□□□□□ -0.93
HMGB4-203ENST00000519684 PRAMEF18Q5VWM3 479 aa9.26□□□□□ -0.93
HMGB4-203ENST00000519684 SNRNP48Q6IEG0 339 aaKnown RBP9.26□□□□□ -0.93
HMGB4-203ENST00000519684 PADI6Q6TGC4 694 aa9.26□□□□□ -0.93
HMGB4-203ENST00000519684 GPC2Q8N158 579 aa9.26□□□□□ -0.93
HMGB4-203ENST00000519684 GPR161Q8N6U8 529 aaKnown RBP9.26□□□□□ -0.93
HMGB4-203ENST00000519684 NLGN2Q8NFZ4 835 aa9.26□□□□□ -0.93
HMGB4-203ENST00000519684 GOLGA5Q8TBA6 731 aa9.26□□□□□ -0.93
HMGB4-203ENST00000519684 TRPM4Q8TD43 1214 aa9.26□□□□□ -0.93
HMGB4-203ENST00000519684 SECISBP2LQ93073 1101 aaKnown RBP9.26□□□□□ -0.93
HMGB4-203ENST00000519684 C12orf42Q96LP6 360 aa9.26□□□□□ -0.93
HMGB4-203ENST00000519684 CRACR2AQ9BSW2 395 aa9.26□□□□□ -0.93
HMGB4-203ENST00000519684 DBR1Q9UK59 544 aaKnown RBP9.26□□□□□ -0.93
HMGB4-203ENST00000519684 MYO6Q9UM54 1294 aa9.26□□□□□ -0.93
HMGB4-203ENST00000519684 PCDHA13Q9Y5I0 950 aa9.26□□□□□ -0.93
HMGB4-203ENST00000519684 COL11A1P12107 1806 aaPredicted RBP9.26□□□□□ -0.93
HMGB4-203ENST00000519684 SSU72P8A0A1W2PR75 194 aa9.25□□□□□ -0.93
HMGB4-203ENST00000519684 TESPA1A2RU30 521 aaPredicted RBP9.25□□□□□ -0.93
HMGB4-203ENST00000519684 CLIC2O15247 247 aa9.25□□□□□ -0.93
HMGB4-203ENST00000519684 HIP1RO75146 1068 aa9.25□□□□□ -0.93
HMGB4-203ENST00000519684 H2AFXP16104 143 aaPredicted RBP9.25□□□□□ -0.93
HMGB4-203ENST00000519684 SFNP31947 248 aa9.25□□□□□ -0.93
HMGB4-203ENST00000519684 DSG3P32926 999 aa9.25□□□□□ -0.93
HMGB4-203ENST00000519684 PSMC2P35998 433 aaKnown RBP9.25□□□□□ -0.93
HMGB4-203ENST00000519684 KRT76Q01546 638 aa9.25□□□□□ -0.93
HMGB4-203ENST00000519684 CYP27A1Q02318 531 aa9.25□□□□□ -0.93
HMGB4-203ENST00000519684 ITGB3BPQ13352 177 aaPredicted RBP9.25□□□□□ -0.93
HMGB4-203ENST00000519684 RAPGEF1Q13905 1077 aa9.25□□□□□ -0.93
HMGB4-203ENST00000519684 ASIC2Q16515 512 aa9.25□□□□□ -0.93
HMGB4-203ENST00000519684 NFIL3Q16649 462 aa9.25□□□□□ -0.93
HMGB4-203ENST00000519684 NLRX1Q86UT6 975 aa9.25□□□□□ -0.93
HMGB4-203ENST00000519684 FAM186BQ8IYM0 893 aa9.25□□□□□ -0.93
HMGB4-203ENST00000519684 SYCP3Q8IZU3 236 aa9.25□□□□□ -0.93
HMGB4-203ENST00000519684 RABGGTAQ92696 567 aa9.25□□□□□ -0.93
HMGB4-203ENST00000519684 PDCD2LQ9BRP1 358 aa9.25□□□□□ -0.93
HMGB4-203ENST00000519684 PUF60Q9UHX1 559 aaKnown RBP9.25□□□□□ -0.93
HMGB4-203ENST00000519684 DICER1Q9UPY3 1922 aaKnown RBP9.25□□□□□ -0.93
HMGB4-203ENST00000519684 WDR64B1ANS9 1081 aa9.25□□□□□ -0.93
HMGB4-203ENST00000519684 DHX15O43143 795 aaKnown RBP9.25□□□□□ -0.93
HMGB4-203ENST00000519684 TACC1O75410 805 aa9.25□□□□□ -0.93
HMGB4-203ENST00000519684 AKAP3O75969 853 aa9.25□□□□□ -0.93
HMGB4-203ENST00000519684 NOL4O94818 638 aa9.25□□□□□ -0.93
HMGB4-203ENST00000519684 LCA5LO95447 670 aa9.25□□□□□ -0.93
HMGB4-203ENST00000519684 LMNB1P20700 586 aa9.25□□□□□ -0.93
HMGB4-203ENST00000519684 MAPK8IP2Q13387 824 aaPredicted RBP9.25□□□□□ -0.93
HMGB4-203ENST00000519684 ALCAMQ13740 583 aa9.25□□□□□ -0.93
HMGB4-203ENST00000519684 BAATQ14032 418 aaPredicted RBP9.25□□□□□ -0.93
HMGB4-203ENST00000519684 COG2Q14746 738 aa9.25□□□□□ -0.93
HMGB4-203ENST00000519684 EXOC3L4Q17RC7 722 aa9.25□□□□□ -0.93
HMGB4-203ENST00000519684 ZC2HC1CQ53FD0 456 aaPredicted RBP9.25□□□□□ -0.93
HMGB4-203ENST00000519684 GBP6Q6ZN66 633 aa9.25□□□□□ -0.93
HMGB4-203ENST00000519684 RSRC2Q7L4I2 434 aaKnown RBP9.25□□□□□ -0.93
HMGB4-203ENST00000519684 ZNF720Q7Z2F6 126 aa9.25□□□□□ -0.93
HMGB4-203ENST00000519684 PLCB1Q9NQ66 1216 aa9.25□□□□□ -0.93
HMGB4-203ENST00000519684 LARSQ9P2J5 1176 aaKnown RBP9.25□□□□□ -0.93
HMGB4-203ENST00000519684 FRMD4BQ9Y2L6 1034 aa9.25□□□□□ -0.93
HMGB4-203ENST00000519684 ZMYM2Q9UBW7 1377 aa9.24□□□□□ -0.93
HMGB4-203ENST00000519684 MACROD2A1Z1Q3 448 aa9.24□□□□□ -0.93
HMGB4-203ENST00000519684 CTAGE15A4D2H0 777 aa9.24□□□□□ -0.93
HMGB4-203ENST00000519684 POTEB2H3BUK9 544 aa9.24□□□□□ -0.93
HMGB4-203ENST00000519684 K7ENM7 598 aa9.24□□□□□ -0.93
HMGB4-203ENST00000519684 TGFB1I1O43294 461 aa9.24□□□□□ -0.93
HMGB4-203ENST00000519684 LYPLA2O95372 231 aa9.24□□□□□ -0.93
HMGB4-203ENST00000519684 CTAGE8P0CG41 777 aa9.24□□□□□ -0.93
HMGB4-203ENST00000519684 MAGEA1P43355 309 aa9.24□□□□□ -0.93
HMGB4-203ENST00000519684 KCNA1Q09470 495 aa9.24□□□□□ -0.93
HMGB4-203ENST00000519684 NOL9Q5SY16 702 aaKnown RBP9.24□□□□□ -0.93
HMGB4-203ENST00000519684 CTAGE6Q86UF2 777 aa9.24□□□□□ -0.93
HMGB4-203ENST00000519684 CTAGE4Q8IX94 777 aa9.24□□□□□ -0.93
HMGB4-203ENST00000519684 KLRG1Q96E93 195 aa9.24□□□□□ -0.93
HMGB4-203ENST00000519684 ALS2CR12Q96Q35 445 aa9.24□□□□□ -0.93
HMGB4-203ENST00000519684 SPAG5Q96R06 1193 aa9.24□□□□□ -0.93
HMGB4-203ENST00000519684 MKNK1Q9BUB5 465 aa9.24□□□□□ -0.93
HMGB4-203ENST00000519684 TIPINQ9BVW5 301 aa9.24□□□□□ -0.93
HMGB4-203ENST00000519684 LACRTQ9GZZ8 138 aa9.24□□□□□ -0.93
HMGB4-203ENST00000519684 GBP3Q9H0R5 595 aa9.24□□□□□ -0.93
HMGB4-203ENST00000519684 GANQ9H2C0 597 aa9.24□□□□□ -0.93
HMGB4-203ENST00000519684 TFR2Q9UP52 801 aa9.24□□□□□ -0.93
HMGB4-203ENST00000519684 ANO9A1A5B4 782 aa9.23□□□□□ -0.93
HMGB4-203ENST00000519684 MAPTP10636 758 aaKnown RBP9.23□□□□□ -0.93
HMGB4-203ENST00000519684 YWHABP31946 246 aaKnown RBP9.23□□□□□ -0.93
HMGB4-203ENST00000519684 CASP4P49662 377 aa9.23□□□□□ -0.93
HMGB4-203ENST00000519684 PSMC5P62195 406 aa9.23□□□□□ -0.93
HMGB4-203ENST00000519684 KLHL30Q0D2K2 578 aa9.23□□□□□ -0.93
HMGB4-203ENST00000519684 TMCO3Q6UWJ1 677 aa9.23□□□□□ -0.93
HMGB4-203ENST00000519684 MAEAQ7L5Y9 396 aa9.23□□□□□ -0.93
HMGB4-203ENST00000519684 GPIHBP1Q8IV16 184 aa9.23□□□□□ -0.93
HMGB4-203ENST00000519684 TRIM58Q8NG06 486 aa9.23□□□□□ -0.93
HMGB4-203ENST00000519684 RDM1Q8NG50 284 aa9.23□□□□□ -0.93
HMGB4-203ENST00000519684 NSUN6Q8TEA1 469 aaKnown RBP9.23□□□□□ -0.93
HMGB4-203ENST00000519684 GPRASP2Q96D09 838 aa9.23□□□□□ -0.93
HMGB4-203ENST00000519684 WNK4Q96J92 1243 aa9.23□□□□□ -0.93
HMGB4-203ENST00000519684 DRC1Q96MC2 740 aa9.23□□□□□ -0.93
HMGB4-203ENST00000519684 PURBQ96QR8 312 aaKnown RBP9.23□□□□□ -0.93
HMGB4-203ENST00000519684 TEX13BQ9BXU2 312 aa9.23□□□□□ -0.93
HMGB4-203ENST00000519684 BCAS3Q9H6U6 928 aa9.23□□□□□ -0.93
HMGB4-203ENST00000519684 FZD1Q9UP38 647 aa9.23□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms