RNA–Protein interactions for RNA: ENST00000518743.1

HMGB1P23-201, Transcript of high mobility group box 1 pseudogene 23, humanhuman

BASIC

Gene HMGB1P23, Length 568 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P23-201ENST00000518743 STXBP3O00186 592 aa5.99□□□□□ -1.45
HMGB1P23-201ENST00000518743 NEMP1O14524 444 aa5.99□□□□□ -1.45
HMGB1P23-201ENST00000518743 AKAP10O43572 662 aa5.99□□□□□ -1.45
HMGB1P23-201ENST00000518743 FKBP9O95302 570 aa5.99□□□□□ -1.45
HMGB1P23-201ENST00000518743 TBC1D8O95759 1140 aa5.99□□□□□ -1.45
HMGB1P23-201ENST00000518743 SCGB1D2O95969 90 aa5.99□□□□□ -1.45
HMGB1P23-201ENST00000518743 MYL1P05976 194 aa5.99□□□□□ -1.45
HMGB1P23-201ENST00000518743 VCAM1P19320 739 aa5.99□□□□□ -1.45
HMGB1P23-201ENST00000518743 GNALP38405 381 aa5.99□□□□□ -1.45
HMGB1P23-201ENST00000518743 RAB27AP51159 221 aa5.99□□□□□ -1.45
HMGB1P23-201ENST00000518743 PCBP3P57721 371 aaKnown RBP5.99□□□□□ -1.45
HMGB1P23-201ENST00000518743 SNRPNP63162 240 aaKnown RBP5.99□□□□□ -1.45
HMGB1P23-201ENST00000518743 DDR1Q08345 913 aa5.99□□□□□ -1.45
HMGB1P23-201ENST00000518743 CDK5R2Q13319 367 aa5.99□□□□□ -1.45
HMGB1P23-201ENST00000518743 PRSS53Q2L4Q9 553 aa5.99□□□□□ -1.45
HMGB1P23-201ENST00000518743 ATP13A4Q4VNC1 1196 aa5.99□□□□□ -1.45
HMGB1P23-201ENST00000518743 CXorf57Q6NSI4 855 aaKnown RBP5.99□□□□□ -1.45
HMGB1P23-201ENST00000518743 CYP2R1Q6VVX0 501 aa5.99□□□□□ -1.45
HMGB1P23-201ENST00000518743 FKBP9P1Q75LS8 142 aa5.99□□□□□ -1.45
HMGB1P23-201ENST00000518743 CLEC10AQ8IUN9 316 aa5.99□□□□□ -1.45
HMGB1P23-201ENST00000518743 TCEAL8Q8IYN2 117 aa5.99□□□□□ -1.45
HMGB1P23-201ENST00000518743 CHST14Q8NCH0 376 aa5.99□□□□□ -1.45
HMGB1P23-201ENST00000518743 FRS2Q8WU20 508 aa5.99□□□□□ -1.45
HMGB1P23-201ENST00000518743 WFDC12Q8WWY7 111 aa5.99□□□□□ -1.45
HMGB1P23-201ENST00000518743 LTV1Q96GA3 475 aaPredicted RBP5.99□□□□□ -1.45
HMGB1P23-201ENST00000518743 SCARF2Q96GP6 870 aaPredicted RBP5.99□□□□□ -1.45
HMGB1P23-201ENST00000518743 SMAD5Q99717 465 aaKnown RBP5.99□□□□□ -1.45
HMGB1P23-201ENST00000518743 CDK19Q9BWU1 502 aa5.99□□□□□ -1.45
HMGB1P23-201ENST00000518743 HDAC8Q9BY41 377 aa5.99□□□□□ -1.45
HMGB1P23-201ENST00000518743 KCNF1Q9H3M0 494 aa5.99□□□□□ -1.45
HMGB1P23-201ENST00000518743 B4GALT6Q9UBX8 382 aa5.99□□□□□ -1.45
HMGB1P23-201ENST00000518743 TRHDEQ9UKU6 1024 aa5.99□□□□□ -1.45
HMGB1P23-201ENST00000518743 PCDHA8Q9Y5H6 950 aa5.99□□□□□ -1.45
HMGB1P23-201ENST00000518743 ZDBF2Q9HCK1 2354 aa5.99□□□□□ -1.45
HMGB1P23-201ENST00000518743 WASHC2AQ641Q2 1341 aa5.99□□□□□ -1.45
HMGB1P23-201ENST00000518743 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP5.98□□□□□ -1.45
HMGB1P23-201ENST00000518743 FAM155AB1AL88 458 aaPredicted RBP5.98□□□□□ -1.45
HMGB1P23-201ENST00000518743 FAM229AH3BQW9 127 aa5.98□□□□□ -1.45
HMGB1P23-201ENST00000518743 RNF225M0QZC1 329 aaPredicted RBP5.98□□□□□ -1.45
HMGB1P23-201ENST00000518743 ALX3O95076 343 aa5.98□□□□□ -1.45
HMGB1P23-201ENST00000518743 CBX7O95931 251 aa5.98□□□□□ -1.45
HMGB1P23-201ENST00000518743 CFBP00751 764 aa5.98□□□□□ -1.45
HMGB1P23-201ENST00000518743 CT47B1P0C2W7 299 aaPredicted RBP5.98□□□□□ -1.45
HMGB1P23-201ENST00000518743 FAM87AP0C7U9 286 aa5.98□□□□□ -1.45
HMGB1P23-201ENST00000518743 CCND1P24385 295 aa5.98□□□□□ -1.45
HMGB1P23-201ENST00000518743 KPNA1P52294 538 aaPredicted RBP5.98□□□□□ -1.45
HMGB1P23-201ENST00000518743 KRT85P78386 507 aa5.98□□□□□ -1.45
HMGB1P23-201ENST00000518743 DSG1Q02413 1049 aa5.98□□□□□ -1.45
HMGB1P23-201ENST00000518743 BIRC2Q13490 618 aa5.98□□□□□ -1.45
HMGB1P23-201ENST00000518743 GRIK4Q16099 956 aa5.98□□□□□ -1.45
HMGB1P23-201ENST00000518743 SLC4A8Q2Y0W8 1093 aa5.98□□□□□ -1.45
HMGB1P23-201ENST00000518743 GFOD2Q3B7J2 385 aa5.98□□□□□ -1.45
HMGB1P23-201ENST00000518743 RGMBQ6NW40 437 aa5.98□□□□□ -1.45
HMGB1P23-201ENST00000518743 OGFOD3Q6PK18 319 aa5.98□□□□□ -1.45
HMGB1P23-201ENST00000518743 SHISA2Q6UWI4 295 aa5.98□□□□□ -1.45
HMGB1P23-201ENST00000518743 DZIP1LQ8IYY4 767 aaKnown RBP5.98□□□□□ -1.45
HMGB1P23-201ENST00000518743 IGSF22Q8N9C0 903 aa5.98□□□□□ -1.45
HMGB1P23-201ENST00000518743 FBXW5Q969U6 566 aa5.98□□□□□ -1.45
HMGB1P23-201ENST00000518743 Q96M66 194 aa5.98□□□□□ -1.45
HMGB1P23-201ENST00000518743 SLC13A1Q9BZW2 595 aa5.98□□□□□ -1.45
HMGB1P23-201ENST00000518743 C14orf93Q9H972 538 aaKnown RBP5.98□□□□□ -1.45
HMGB1P23-201ENST00000518743 MKNK2Q9HBH9 465 aa5.98□□□□□ -1.45
HMGB1P23-201ENST00000518743 LGR6Q9HBX8 967 aa5.98□□□□□ -1.45
HMGB1P23-201ENST00000518743 LUC7LQ9NQ29 371 aaKnown RBP5.98□□□□□ -1.45
HMGB1P23-201ENST00000518743 C1GALT1Q9NS00 363 aa5.98□□□□□ -1.45
HMGB1P23-201ENST00000518743 ZNF180Q9UJW8 692 aa5.98□□□□□ -1.45
HMGB1P23-201ENST00000518743 ZNF652Q9Y2D9 606 aa5.98□□□□□ -1.45
HMGB1P23-201ENST00000518743 TTC21AQ8NDW8 1320 aa5.98□□□□□ -1.45
HMGB1P23-201ENST00000518743 ITGB4P16144 1822 aa5.97□□□□□ -1.45
HMGB1P23-201ENST00000518743 LOC102724159A0A0B4J2E5 919 aa5.97□□□□□ -1.45
HMGB1P23-201ENST00000518743 NPHP3-ACAD11A0A0J9YXS1 232 aa5.97□□□□□ -1.45
HMGB1P23-201ENST00000518743 M0R2C6 588 aa5.97□□□□□ -1.45
HMGB1P23-201ENST00000518743 MEIS1O00470 390 aa5.97□□□□□ -1.45
HMGB1P23-201ENST00000518743 LRRN2O75325 713 aa5.97□□□□□ -1.45
HMGB1P23-201ENST00000518743 PEX14O75381 377 aa5.97□□□□□ -1.45
HMGB1P23-201ENST00000518743 GLRX3O76003 335 aaKnown RBP5.97□□□□□ -1.45
HMGB1P23-201ENST00000518743 SNUPNO95149 360 aaKnown RBP5.97□□□□□ -1.45
HMGB1P23-201ENST00000518743 VAV1P15498 845 aa5.97□□□□□ -1.45
HMGB1P23-201ENST00000518743 IREB2P48200 963 aaKnown RBP5.97□□□□□ -1.45
HMGB1P23-201ENST00000518743 PWP2Q15269 919 aaKnown RBP5.97□□□□□ -1.45
HMGB1P23-201ENST00000518743 TMEM177Q53S58 311 aa5.97□□□□□ -1.45
HMGB1P23-201ENST00000518743 FAM102BQ5T8I3 360 aa5.97□□□□□ -1.45
HMGB1P23-201ENST00000518743 CRTC3Q6UUV7 619 aa5.97□□□□□ -1.45
HMGB1P23-201ENST00000518743 KCNT2Q6UVM3 1135 aa5.97□□□□□ -1.45
HMGB1P23-201ENST00000518743 RNF111Q6ZNA4 994 aa5.97□□□□□ -1.45
HMGB1P23-201ENST00000518743 BEND4Q6ZU67 534 aa5.97□□□□□ -1.45
HMGB1P23-201ENST00000518743 C16orf59Q7L2K0 433 aa5.97□□□□□ -1.45
HMGB1P23-201ENST00000518743 SMC5Q8IY18 1101 aa5.97□□□□□ -1.45
HMGB1P23-201ENST00000518743 TSR2Q969E8 191 aaKnown RBP5.97□□□□□ -1.45
HMGB1P23-201ENST00000518743 HOOK2Q96ED9 719 aa5.97□□□□□ -1.45
HMGB1P23-201ENST00000518743 FCRL3Q96P31 734 aaPredicted RBP5.97□□□□□ -1.45
HMGB1P23-201ENST00000518743 UBL7Q96S82 380 aaPredicted RBP5.97□□□□□ -1.45
HMGB1P23-201ENST00000518743 YIPF4Q9BSR8 244 aa5.97□□□□□ -1.45
HMGB1P23-201ENST00000518743 GLIS2Q9BZE0 524 aaPredicted RBP5.97□□□□□ -1.45
HMGB1P23-201ENST00000518743 TRIM17Q9Y577 477 aa5.97□□□□□ -1.45
HMGB1P23-201ENST00000518743 NR2E3Q9Y5X4 410 aa5.97□□□□□ -1.45
HMGB1P23-201ENST00000518743 MRFAP1Q9Y605 127 aa5.97□□□□□ -1.45
HMGB1P23-201ENST00000518743 CAPN6Q9Y6Q1 641 aa5.97□□□□□ -1.45
HMGB1P23-201ENST00000518743 LTN1O94822 1766 aa5.97□□□□□ -1.45
HMGB1P23-201ENST00000518743 CHD8Q9HCK8 2581 aa5.97□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms