RNA–Protein interactions for RNA: ENST00000515063.1

CAST-242, Transcript of calpastatin, humanhuman

TSL 1 (best)

Gene CAST, Length 654 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAST-242ENST00000515063 CELF4Q9BZC1 486 aaKnown RBP5.01□□□□□ -1.61
CAST-242ENST00000515063 CCDC7Q96M83 1385 aa5.01□□□□□ -1.61
CAST-242ENST00000515063 PLEKHH2Q8IVE3 1493 aa5□□□□□ -1.61
CAST-242ENST00000515063 CDC42BPBQ9Y5S2 1711 aa5□□□□□ -1.61
CAST-242ENST00000515063 B4E1Z4 1266 aa5□□□□□ -1.61
CAST-242ENST00000515063 H0Y858 1186 aa5□□□□□ -1.61
CAST-242ENST00000515063 MAN2B1O00754 1011 aa5□□□□□ -1.61
CAST-242ENST00000515063 KCNQ2O43526 872 aa5□□□□□ -1.61
CAST-242ENST00000515063 CUTAO60888 179 aa5□□□□□ -1.61
CAST-242ENST00000515063 CLASP2O75122 1294 aaKnown RBP5□□□□□ -1.61
CAST-242ENST00000515063 ITGB3P05106 788 aa5□□□□□ -1.61
CAST-242ENST00000515063 ADRB1P08588 477 aa5□□□□□ -1.61
CAST-242ENST00000515063 GLRBP48167 497 aa5□□□□□ -1.61
CAST-242ENST00000515063 HERVK_113P62684 666 aa5□□□□□ -1.61
CAST-242ENST00000515063 EFEMP1Q12805 493 aa5□□□□□ -1.61
CAST-242ENST00000515063 ZNF568Q3ZCX4 644 aa5□□□□□ -1.61
CAST-242ENST00000515063 TBC1D10BQ4KMP7 808 aaPredicted RBP5□□□□□ -1.61
CAST-242ENST00000515063 ARHGEF18Q6ZSZ5 1173 aa5□□□□□ -1.61
CAST-242ENST00000515063 RALYLQ86SE5 291 aaKnown RBP5□□□□□ -1.61
CAST-242ENST00000515063 OSTM1Q86WC4 334 aa5□□□□□ -1.61
CAST-242ENST00000515063 PTRH1Q86Y79 214 aaKnown RBP5□□□□□ -1.61
CAST-242ENST00000515063 KBTBD2Q8IY47 623 aa5□□□□□ -1.61
CAST-242ENST00000515063 TTC9BQ8N6N2 239 aa5□□□□□ -1.61
CAST-242ENST00000515063 WDR48Q8TAF3 677 aa5□□□□□ -1.61
CAST-242ENST00000515063 SH3RF2Q8TEC5 729 aa5□□□□□ -1.61
CAST-242ENST00000515063 KCND1Q9NSA2 647 aa5□□□□□ -1.61
CAST-242ENST00000515063 RBPJLQ9UBG7 517 aa5□□□□□ -1.61
CAST-242ENST00000515063 ADAM29Q9UKF5 820 aa5□□□□□ -1.61
CAST-242ENST00000515063 CBLCQ9ULV8 474 aa5□□□□□ -1.61
CAST-242ENST00000515063 WASF3Q9UPY6 502 aa5□□□□□ -1.61
CAST-242ENST00000515063 PTCH2Q9Y6C5 1203 aa5□□□□□ -1.61
CAST-242ENST00000515063 CHD1O14646 1710 aa5□□□□□ -1.61
CAST-242ENST00000515063 CCDC141Q6ZP82 1450 aa5□□□□□ -1.61
CAST-242ENST00000515063 PLXNC1O60486 1568 aa4.99□□□□□ -1.61
CAST-242ENST00000515063 WASHC2AQ641Q2 1341 aa4.99□□□□□ -1.61
CAST-242ENST00000515063 C9orf84Q5VXU9 1444 aa4.99□□□□□ -1.61
CAST-242ENST00000515063 LOC101059915A0A1B0GWI6 518 aaPredicted RBP4.99□□□□□ -1.61
CAST-242ENST00000515063 TCRBV5S4A2TA0A5A2 114 aa4.99□□□□□ -1.61
CAST-242ENST00000515063 PRAMEF25A6NGN4 478 aa4.99□□□□□ -1.61
CAST-242ENST00000515063 ZNF561-AS1K7EIQ3 104 aa4.99□□□□□ -1.61
CAST-242ENST00000515063 ACOT7O00154 380 aa4.99□□□□□ -1.61
CAST-242ENST00000515063 PLD2O14939 933 aa4.99□□□□□ -1.61
CAST-242ENST00000515063 B4GALT3O60512 393 aa4.99□□□□□ -1.61
CAST-242ENST00000515063 HIP1RO75146 1068 aa4.99□□□□□ -1.61
CAST-242ENST00000515063 KNG1P01042 644 aa4.99□□□□□ -1.61
CAST-242ENST00000515063 AMY2AP04746 511 aa4.99□□□□□ -1.61
CAST-242ENST00000515063 TSPY4P0CV99 314 aa4.99□□□□□ -1.61
CAST-242ENST00000515063 TSPY10P0CW01 314 aa4.99□□□□□ -1.61
CAST-242ENST00000515063 AMY2BP19961 511 aa4.99□□□□□ -1.61
CAST-242ENST00000515063 BMS1Q14692 1282 aaKnown RBP4.99□□□□□ -1.61
CAST-242ENST00000515063 HHIPL2Q6UWX4 724 aa4.99□□□□□ -1.61
CAST-242ENST00000515063 DBX2Q6ZNG2 339 aa4.99□□□□□ -1.61
CAST-242ENST00000515063 Q6ZUG5 572 aa4.99□□□□□ -1.61
CAST-242ENST00000515063 BRAPQ7Z569 592 aa4.99□□□□□ -1.61
CAST-242ENST00000515063 STPG3Q8N7X2 389 aa4.99□□□□□ -1.61
CAST-242ENST00000515063 SAMD11Q96NU1 681 aa4.99□□□□□ -1.61
CAST-242ENST00000515063 NCOA5Q9HCD5 579 aaKnown RBP4.99□□□□□ -1.61
CAST-242ENST00000515063 JADE2Q9NQC1 790 aa4.99□□□□□ -1.61
CAST-242ENST00000515063 FBXO10Q9UK96 956 aa4.99□□□□□ -1.61
CAST-242ENST00000515063 ZDHHC9Q9Y397 364 aa4.99□□□□□ -1.61
CAST-242ENST00000515063 ROCK2O75116 1388 aaKnown RBP4.99□□□□□ -1.61
CAST-242ENST00000515063 RALGAPBQ86X10 1494 aa4.99□□□□□ -1.61
CAST-242ENST00000515063 UNC13BO14795 1591 aa4.99□□□□□ -1.61
CAST-242ENST00000515063 KDM5CP41229 1560 aa4.99□□□□□ -1.61
CAST-242ENST00000515063 SAMD9LQ8IVG5 1584 aa4.99□□□□□ -1.61
CAST-242ENST00000515063 ZNF644Q9H582 1327 aaPredicted RBP4.98□□□□□ -1.61
CAST-242ENST00000515063 ARAP3Q8WWN8 1544 aa4.98□□□□□ -1.61
CAST-242ENST00000515063 ABCC2Q92887 1545 aa4.98□□□□□ -1.61
CAST-242ENST00000515063 LAMC1P11047 1609 aa4.98□□□□□ -1.61
CAST-242ENST00000515063 MYO5CQ9NQX4 1742 aa4.98□□□□□ -1.61
CAST-242ENST00000515063 FAM90A27PA6NNH2 459 aa4.98□□□□□ -1.61
CAST-242ENST00000515063 KLHL18O94889 574 aa4.98□□□□□ -1.61
CAST-242ENST00000515063 RASGRP1O95267 797 aa4.98□□□□□ -1.61
CAST-242ENST00000515063 COL6A1P12109 1028 aa4.98□□□□□ -1.61
CAST-242ENST00000515063 PTGS1P23219 599 aa4.98□□□□□ -1.61
CAST-242ENST00000515063 JAM2P57087 298 aa4.98□□□□□ -1.61
CAST-242ENST00000515063 PPP2CBP62714 309 aa4.98□□□□□ -1.61
CAST-242ENST00000515063 PPP2CAP67775 309 aa4.98□□□□□ -1.61
CAST-242ENST00000515063 FNDC3BQ53EP0 1204 aaKnown RBP4.98□□□□□ -1.61
CAST-242ENST00000515063 CXXC5Q7LFL8 322 aaKnown RBP4.98□□□□□ -1.61
CAST-242ENST00000515063 DDX53Q86TM3 631 aaKnown RBP4.98□□□□□ -1.61
CAST-242ENST00000515063 CISD2Q8N5K1 135 aaKnown RBP4.98□□□□□ -1.61
CAST-242ENST00000515063 MBD6Q96DN6 1003 aa4.98□□□□□ -1.61
CAST-242ENST00000515063 AJUBAQ96IF1 538 aa4.98□□□□□ -1.61
CAST-242ENST00000515063 TACO1Q9BSH4 297 aaKnown RBP4.98□□□□□ -1.61
CAST-242ENST00000515063 ZSWIM4Q9H7M6 989 aa4.98□□□□□ -1.61
CAST-242ENST00000515063 SMURF1Q9HCE7 757 aa4.98□□□□□ -1.61
CAST-242ENST00000515063 INCENPQ9NQS7 918 aa4.98□□□□□ -1.61
CAST-242ENST00000515063 SMPD4Q9NXE4 827 aa4.98□□□□□ -1.61
CAST-242ENST00000515063 KTN1Q86UP2 1357 aaKnown RBP4.98□□□□□ -1.61
CAST-242ENST00000515063 UHRF1BP1LA0JNW5 1464 aa4.98□□□□□ -1.61
CAST-242ENST00000515063 ATP10AO60312 1499 aa4.97□□□□□ -1.61
CAST-242ENST00000515063 TCRBV16S1A1N1A0A5B0 115 aa4.97□□□□□ -1.61
CAST-242ENST00000515063 SLC12A8A0AV02 714 aa4.97□□□□□ -1.61
CAST-242ENST00000515063 NPEPPSL1A6NEC2 478 aa4.97□□□□□ -1.61
CAST-242ENST00000515063 AOAHP28039 575 aa4.97□□□□□ -1.61
CAST-242ENST00000515063 EPHB4P54760 987 aa4.97□□□□□ -1.61
CAST-242ENST00000515063 NBPF8Q3BBV2 869 aa4.97□□□□□ -1.61
CAST-242ENST00000515063 SLFN13Q68D06 897 aa4.97□□□□□ -1.61
CAST-242ENST00000515063 SYNPOQ8N3V7 929 aa4.97□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 57.6 ms