RNA–Protein interactions for RNA: ENST00000514642.1

CCDC30-214, Transcript of coiled-coil domain containing 30, humanhuman

TSL 1 (best)

Gene CCDC30, Length 6,827 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC30-214ENST00000514642 CYFIP1Q7L576 1253 aa8.08□□□□□ -1.12
CCDC30-214ENST00000514642 SHCBP1Q8NEM2 672 aa8.08□□□□□ -1.12
CCDC30-214ENST00000514642 NEDD1Q8NHV4 660 aa8.08□□□□□ -1.12
CCDC30-214ENST00000514642 SCYL1Q96KG9 808 aa8.08□□□□□ -1.12
CCDC30-214ENST00000514642 FBXL21Q9UKT6 434 aa8.08□□□□□ -1.12
CCDC30-214ENST00000514642 SH3BP1Q9Y3L3 701 aa8.08□□□□□ -1.12
CCDC30-214ENST00000514642 RFX7Q2KHR2 1363 aa8.08□□□□□ -1.12
CCDC30-214ENST00000514642 ATN1P54259 1190 aaPredicted RBP8.08□□□□□ -1.12
CCDC30-214ENST00000514642 BAATQ14032 418 aaPredicted RBP8.08□□□□□ -1.12
CCDC30-214ENST00000514642 XRRA1Q6P2D8 792 aa8.08□□□□□ -1.12
CCDC30-214ENST00000514642 CCNYQ8ND76 341 aa8.08□□□□□ -1.12
CCDC30-214ENST00000514642 CLIC2O15247 247 aa8.08□□□□□ -1.12
CCDC30-214ENST00000514642 CEP104O60308 925 aa8.08□□□□□ -1.12
CCDC30-214ENST00000514642 ABCB4P21439 1286 aa8.08□□□□□ -1.12
CCDC30-214ENST00000514642 ZNF467Q7Z7K2 595 aaPredicted RBP8.08□□□□□ -1.12
CCDC30-214ENST00000514642 NSUN4Q96CB9 384 aaKnown RBP8.08□□□□□ -1.12
CCDC30-214ENST00000514642 PFKFB3Q16875 520 aaPredicted RBP8.08□□□□□ -1.12
CCDC30-214ENST00000514642 KCTD6Q8NC69 237 aa8.08□□□□□ -1.12
CCDC30-214ENST00000514642 CDKL2Q92772 493 aa8.08□□□□□ -1.12
CCDC30-214ENST00000514642 ERAP1Q9NZ08 941 aa8.08□□□□□ -1.12
CCDC30-214ENST00000514642 IPPQ9Y573 584 aa8.08□□□□□ -1.12
CCDC30-214ENST00000514642 ADGRB2O60241 1585 aa8.07□□□□□ -1.12
CCDC30-214ENST00000514642 CXCL11O14625 94 aa8.07□□□□□ -1.12
CCDC30-214ENST00000514642 CYP2C9P11712 490 aa8.07□□□□□ -1.12
CCDC30-214ENST00000514642 RCAN1P53805 252 aa8.07□□□□□ -1.12
CCDC30-214ENST00000514642 AMPD2Q01433 879 aa8.07□□□□□ -1.12
CCDC30-214ENST00000514642 CACNB1Q02641 598 aaPredicted RBP8.07□□□□□ -1.12
CCDC30-214ENST00000514642 DRP2Q13474 957 aa8.07□□□□□ -1.12
CCDC30-214ENST00000514642 THOC5Q13769 683 aaKnown RBP8.07□□□□□ -1.12
CCDC30-214ENST00000514642 ZKSCAN4Q969J2 545 aaPredicted RBP8.07□□□□□ -1.12
CCDC30-214ENST00000514642 NAPGQ99747 312 aaPredicted RBP8.07□□□□□ -1.12
CCDC30-214ENST00000514642 GNL3Q9BVP2 549 aaKnown RBP eCLIP8.07□□□□□ -1.12
CCDC30-214ENST00000514642 PNPLA7Q6ZV29 1317 aa8.07□□□□□ -1.12
CCDC30-214ENST00000514642 POLR3GO15318 223 aaPredicted RBP8.07□□□□□ -1.12
CCDC30-214ENST00000514642 MSCO60682 206 aa8.07□□□□□ -1.12
CCDC30-214ENST00000514642 TBC1D8O95759 1140 aa8.07□□□□□ -1.12
CCDC30-214ENST00000514642 CMA1P23946 247 aa8.07□□□□□ -1.12
CCDC30-214ENST00000514642 ARL4DP49703 201 aa8.07□□□□□ -1.12
CCDC30-214ENST00000514642 ZNF589Q86UQ0 364 aaPredicted RBP8.07□□□□□ -1.12
CCDC30-214ENST00000514642 RAB42Q8N4Z0 105 aa8.07□□□□□ -1.12
CCDC30-214ENST00000514642 TMEM199Q8N511 208 aa8.07□□□□□ -1.12
CCDC30-214ENST00000514642 FBF1Q8TES7 1133 aa8.07□□□□□ -1.12
CCDC30-214ENST00000514642 MRRFQ96E11 262 aaKnown RBP8.07□□□□□ -1.12
CCDC30-214ENST00000514642 CCDC51Q96ER9 411 aa8.07□□□□□ -1.12
CCDC30-214ENST00000514642 TIGD1Q96MW7 591 aa8.07□□□□□ -1.12
CCDC30-214ENST00000514642 GAS2L1Q99501 681 aaPredicted RBP8.07□□□□□ -1.12
CCDC30-214ENST00000514642 GLIS2Q9BZE0 524 aaPredicted RBP8.07□□□□□ -1.12
CCDC30-214ENST00000514642 EDEM3Q9BZQ6 932 aa8.07□□□□□ -1.12
CCDC30-214ENST00000514642 RNF208Q9H0X6 261 aa8.07□□□□□ -1.12
CCDC30-214ENST00000514642 RBSNQ9H1K0 784 aa8.07□□□□□ -1.12
CCDC30-214ENST00000514642 LRRC7Q96NW7 1537 aa8.07□□□□□ -1.12
CCDC30-214ENST00000514642 GOLGA8SH3BPF8 625 aa8.07□□□□□ -1.12
CCDC30-214ENST00000514642 I3L4J1 428 aa8.07□□□□□ -1.12
CCDC30-214ENST00000514642 IKBKBO14920 756 aa8.07□□□□□ -1.12
CCDC30-214ENST00000514642 PRKCBP05771 671 aa8.07□□□□□ -1.12
CCDC30-214ENST00000514642 SRGNP10124 158 aa8.07□□□□□ -1.12
CCDC30-214ENST00000514642 IFNAR1P17181 557 aa8.07□□□□□ -1.12
CCDC30-214ENST00000514642 LMNB2Q03252 620 aa8.07□□□□□ -1.12
CCDC30-214ENST00000514642 ANKS4BQ8N8V4 417 aa8.07□□□□□ -1.12
CCDC30-214ENST00000514642 BBOF1Q8ND07 529 aa8.07□□□□□ -1.12
CCDC30-214ENST00000514642 VPS37BQ9H9H4 285 aa8.07□□□□□ -1.12
CCDC30-214ENST00000514642 EMILIN3Q9NT22 766 aa8.07□□□□□ -1.12
CCDC30-214ENST00000514642 IPO5O00410 1097 aaKnown RBP8.07□□□□□ -1.12
CCDC30-214ENST00000514642 MXI1P50539 228 aa8.07□□□□□ -1.12
CCDC30-214ENST00000514642 USP11P51784 963 aa8.07□□□□□ -1.12
CCDC30-214ENST00000514642 KRBA2Q6ZNG9 492 aa8.07□□□□□ -1.12
CCDC30-214ENST00000514642 TOGARAM2Q6ZUX3 1019 aa8.07□□□□□ -1.12
CCDC30-214ENST00000514642 ARHGAP30Q7Z6I6 1101 aaPredicted RBP8.07□□□□□ -1.12
CCDC30-214ENST00000514642 IFT43Q96FT9 208 aa8.07□□□□□ -1.12
CCDC30-214ENST00000514642 NEDD4P46934 1319 aa8.07□□□□□ -1.12
CCDC30-214ENST00000514642 HBP1O60381 514 aa8.07□□□□□ -1.12
CCDC30-214ENST00000514642 CD4P01730 458 aa8.07□□□□□ -1.12
CCDC30-214ENST00000514642 IGFBP4P22692 258 aa8.07□□□□□ -1.12
CCDC30-214ENST00000514642 OR1G1P47890 313 aa8.07□□□□□ -1.12
CCDC30-214ENST00000514642 IRX5P78411 483 aaPredicted RBP8.07□□□□□ -1.12
CCDC30-214ENST00000514642 PLD1Q13393 1074 aa8.07□□□□□ -1.12
CCDC30-214ENST00000514642 MCM6Q14566 821 aa8.07□□□□□ -1.12
CCDC30-214ENST00000514642 ALX1Q15699 326 aa8.07□□□□□ -1.12
CCDC30-214ENST00000514642 C12orf60Q5U649 245 aa8.07□□□□□ -1.12
CCDC30-214ENST00000514642 SLC44A5Q8NCS7 719 aa8.07□□□□□ -1.12
CCDC30-214ENST00000514642 CDCA5Q96FF9 252 aa8.07□□□□□ -1.12
CCDC30-214ENST00000514642 CHMP6Q96FZ7 201 aa8.07□□□□□ -1.12
CCDC30-214ENST00000514642 UBE2TQ9NPD8 197 aaPredicted RBP8.07□□□□□ -1.12
CCDC30-214ENST00000514642 NFE2L3Q9Y4A8 694 aa8.07□□□□□ -1.12
CCDC30-214ENST00000514642 GOLGA8IPA6NC78 632 aa8.06□□□□□ -1.12
CCDC30-214ENST00000514642 GOLGA8JA6NMD2 632 aa8.06□□□□□ -1.12
CCDC30-214ENST00000514642 POLRMTO00411 1230 aaKnown RBP8.06□□□□□ -1.12
CCDC30-214ENST00000514642 PLEKHA8P1O95397 391 aa8.06□□□□□ -1.12
CCDC30-214ENST00000514642 RGMBQ6NW40 437 aa8.06□□□□□ -1.12
CCDC30-214ENST00000514642 CCDC186Q7Z3E2 898 aa8.06□□□□□ -1.12
CCDC30-214ENST00000514642 TNIP3Q96KP6 325 aa8.06□□□□□ -1.12
CCDC30-214ENST00000514642 MTG1Q9BT17 334 aaPredicted RBP8.06□□□□□ -1.12
CCDC30-214ENST00000514642 MTA3Q9BTC8 594 aa8.06□□□□□ -1.12
CCDC30-214ENST00000514642 SRPRBQ9Y5M8 271 aaKnown RBP8.06□□□□□ -1.12
CCDC30-214ENST00000514642 WDR19Q8NEZ3 1342 aa8.06□□□□□ -1.12
CCDC30-214ENST00000514642 PPFIA4O75335 1185 aa8.06□□□□□ -1.12
CCDC30-214ENST00000514642 PTPAQ15257 358 aa8.06□□□□□ -1.12
CCDC30-214ENST00000514642 KAZNQ674X7 775 aa8.06□□□□□ -1.12
CCDC30-214ENST00000514642 ARHGEF18Q6ZSZ5 1173 aa8.06□□□□□ -1.12
CCDC30-214ENST00000514642 PPP4R1Q8TF05 950 aa8.06□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms